VPS13B 26519

Name: VPS13B	Sequence: fasta or formatted (4022aa)		NCBI GI: 35493713
Description: vacuolar protein sorting 13B isoform 5		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [415aa] vacuolar protein sorting 13B isoform 4 alt prot [3997aa] vacuolar protein sorting 13B isoform 1 alt prot [863aa] vacuolar protein sorting 13B isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 199 2 C cysteine 2.6 104 2 D aspartate 4.5 183 2 E glutamate 6.2 248 2 F phenylalanine 3.7 150 2 G glycine 5.4 218 2 H histidine 2.6 106 2 I isoleucine 6.6 265 3 K lysine 5.6 226 2 L leucine 10.5 422 3 M methionine 1.9 78 2 N asparagine 4.0 161 2 P proline 5.7 228 3 Q glutamine 5.6 226 3 R arginine 3.7 147 2 S serine 9.3 375 3 T threonine 5.9 238 3 V valine 7.3 292 2 W tryptophan 1.2 50 1 Y tyrosine 2.6 106 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 13B isoform 5 VPS13B 0.987 vacuolar protein sorting 13B isoform 1 VPS13B 0.207 vacuolar protein sorting 13B isoform 3 VPS13B 0.098 vacuolar protein sorting 13B isoform 4 VPS13A 0.010 vacuolar protein sorting 13A isoform B VPS13A 0.010 vacuolar protein sorting 13A isoform D VPS13A 0.010 vacuolar protein sorting 13A isoform A VPS13A 0.010 vacuolar protein sorting 13A isoform C VPS13C 0.010 vacuolar protein sorting 13C protein isoform 1A [Hom... VPS13C 0.010 vacuolar protein sorting 13C protein isoform 1B [Hom... VPS13C 0.010 vacuolar protein sorting 13C protein isoform 2B [Hom... VPS13C 0.010 vacuolar protein sorting 13C protein isoform 2A [Hom... VPS13D 0.006 vacuolar protein sorting 13D isoform 2 VPS13D 0.006 vacuolar protein sorting 13D isoform 1 UHRF1BP1 0.004 ICBP90 binding protein 1 UHRF1BP1L 0.004 UHRF1 (ICBP90) binding protein 1-like isoform b [Hom... UHRF1BP1L 0.004 UHRF1 (ICBP90) binding protein 1-like isoform a [Hom... MAST3 0.001 microtubule associated serine/threonine kinase 3 [H... POGZ 0.001 pogo transposable element with ZNF domain isoform 1 ... POGZ 0.001 pogo transposable element with ZNF domain isoform 2 ... C14orf104 0.001 kintoun isoform 1 TFIP11 0.001 tuftelin interacting protein 11 TFIP11 0.001 tuftelin interacting protein 11 MUC5B 0.001 mucin 5, subtype B, tracheobronchial ADCK4 0.001 aarF domain containing kinase 4 isoform b ADCK4 0.001 aarF domain containing kinase 4 isoform a LOC100133756 0.001 PREDICTED: hypothetical protein, partial VSIG2 0.001 V-set and immunoglobulin domain containing 2 IRS2 0.001 insulin receptor substrate 2 DTNA 0.001 dystrobrevin alpha isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.