VPS13B 2373

Name: VPS13B	Sequence: fasta or formatted (415aa)		NCBI GI: 119874215
Description: vacuolar protein sorting 13B isoform 4		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [3997aa] vacuolar protein sorting 13B isoform 1 alt prot [4022aa] vacuolar protein sorting 13B isoform 5 alt prot [863aa] vacuolar protein sorting 13B isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 14 2 C cysteine 2.4 10 2 D aspartate 6.5 27 2 E glutamate 6.3 26 2 F phenylalanine 3.4 14 1 G glycine 5.1 21 2 H histidine 2.2 9 1 I isoleucine 7.5 31 1 K lysine 6.0 25 1 L leucine 10.8 45 2 M methionine 2.7 11 1 N asparagine 4.6 19 2 P proline 4.3 18 2 Q glutamine 5.1 21 2 R arginine 3.4 14 2 S serine 8.0 33 2 T threonine 6.0 25 1 V valine 7.0 29 2 W tryptophan 1.4 6 1 Y tyrosine 4.1 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 13B isoform 4 VPS13B 0.966 vacuolar protein sorting 13B isoform 5 VPS13B 0.966 vacuolar protein sorting 13B isoform 1 VPS13B 0.966 vacuolar protein sorting 13B isoform 3 VPS13C 0.072 vacuolar protein sorting 13C protein isoform 1A [Hom... VPS13C 0.072 vacuolar protein sorting 13C protein isoform 1B [Hom... VPS13A 0.060 vacuolar protein sorting 13A isoform B VPS13A 0.060 vacuolar protein sorting 13A isoform D VPS13A 0.060 vacuolar protein sorting 13A isoform A VPS13A 0.060 vacuolar protein sorting 13A isoform C VPS13C 0.057 vacuolar protein sorting 13C protein isoform 2B [Hom... VPS13C 0.057 vacuolar protein sorting 13C protein isoform 2A [Hom... VPS13D 0.049 vacuolar protein sorting 13D isoform 2 VPS13D 0.049 vacuolar protein sorting 13D isoform 1 UHRF1BP1 0.037 ICBP90 binding protein 1 UHRF1BP1L 0.035 UHRF1 (ICBP90) binding protein 1-like isoform b [Hom... UHRF1BP1L 0.035 UHRF1 (ICBP90) binding protein 1-like isoform a [Hom... FAM71F1 0.010 testes development-related NYD-SP18 ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B LOC100133142 0.006 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.006 PREDICTED: similar to zinc finger protein 208 [Homo... COBL 0.005 cordon-bleu homolog RNF111 0.005 ring finger protein 111 C12orf48 0.005 hypothetical protein LOC55010 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.