Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ADCK4 Sequence: fasta or formatted (503aa) NCBI GI: 217416386
Description:

aarF domain containing kinase 4 isoform b

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [544aa] aarF domain containing kinase 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         52           3
 C cysteine            2.4         12           1
 D aspartate           5.6         28           1
 E glutamate           5.8         29           3
 F phenylalanine       5.0         25           2
 G glycine             8.9         45           2
 H histidine           2.2         11           1
 I isoleucine          2.8         14           1
 K lysine              3.2         16           2
 L leucine            11.5         58           2
 M methionine          1.8          9           1
 N asparagine          1.6          8           1
 P proline             5.6         28           3
 Q glutamine           7.0         35           2
 R arginine            8.2         41           2
 S serine              5.4         27           2
 T threonine           3.8         19           2
 V valine              5.4         27           2
 W tryptophan          2.0         10           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aarF domain containing kinase 4 isoform b 
ADCK4                 0.980   aarF domain containing kinase 4 isoform a 
CABC1                 0.485   chaperone, ABC1 activity of bc1 complex like precurs...
ADCK1                 0.054   aarF domain containing kinase 1 isoform a 
ADCK5                 0.052   aarF domain containing kinase 5 
ADCK1                 0.046   aarF domain containing kinase 1 isoform b 
ADCK2                 0.019   aarF domain containing kinase 2 
VPS13B                0.009   vacuolar protein sorting 13B isoform 5 
VPS13B                0.009   vacuolar protein sorting 13B isoform 1 
VPS13B                0.009   vacuolar protein sorting 13B isoform 3 
CRKRS                 0.007   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.007   Cdc2-related kinase, arginine/serine-rich isoform 1...
LOC100129053          0.007   PREDICTED: hypothetical protein 
LOC100129053          0.007   PREDICTED: hypothetical protein 
LOC100129053          0.007   PREDICTED: hypothetical protein 
LOC100290372          0.007   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.007   PREDICTED: hypothetical protein XP_002342652 
KLF8                  0.006   Kruppel-like factor 8 isoform 1 
CUX1                  0.006   cut-like homeobox 1 isoform c 
CUX1                  0.006   cut-like homeobox 1 isoform b 
RPS6KA5               0.006   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA5               0.006   ribosomal protein S6 kinase, polypeptide 5 isoform a...
LOC100287063          0.006   PREDICTED: hypothetical protein 
KLF8                  0.006   Kruppel-like factor 8 isoform 2 
RPS6KA4               0.006   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA4               0.006   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
ANKRD35               0.006   ankyrin repeat domain 35 
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press