ZMYND8 26401

Name: ZMYND8	Sequence: fasta or formatted (1188aa)		NCBI GI: 34335262
Description: zinc finger, MYND-type containing 8 isoform a		Referenced in: Inositol Pathways PHD Finger Proteins Zinc Finger Proteins
Other entries for this name: alt prot [1135aa] zinc finger, MYND-type containing 8 isoform c alt prot [1160aa] zinc finger, MYND-type containing 8 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 78 2 C cysteine 2.4 29 2 D aspartate 5.6 66 2 E glutamate 8.2 97 3 F phenylalanine 2.2 26 2 G glycine 3.9 46 2 H histidine 2.4 28 1 I isoleucine 3.9 46 2 K lysine 9.4 112 5 L leucine 6.2 74 2 M methionine 2.4 28 2 N asparagine 3.5 41 2 P proline 7.2 86 2 Q glutamine 5.1 61 3 R arginine 3.3 39 2 S serine 12.2 145 4 T threonine 7.9 94 3 V valine 4.5 53 2 W tryptophan 1.2 14 1 Y tyrosine 2.1 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.966 zinc finger, MYND-type containing 8 isoform b ZMYND8 0.937 zinc finger, MYND-type containing 8 isoform c ZMYND11 0.068 zinc finger, MYND domain containing 11 isoform a [H... ZMYND11 0.068 zinc finger, MYND domain containing 11 isoform a [H... ZMYND11 0.066 zinc finger, MYND domain containing 11 isoform b [H... TRIM24 0.027 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.027 transcriptional intermediary factor 1 alpha isoform ... TRIM33 0.026 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.022 tripartite motif-containing 33 protein isoform alpha... DSPP 0.020 dentin sialophosphoprotein preproprotein NEFH 0.019 neurofilament, heavy polypeptide 200kDa TRIM66 0.019 tripartite motif-containing 66 PRG4 0.018 proteoglycan 4 isoform B PRG4 0.018 proteoglycan 4 isoform A TAF1 0.018 TBP-associated factor 1 isoform 2 TAF1 0.018 TBP-associated factor 1 isoform 1 TAF1L 0.018 TBP-associated factor RNA polymerase 1-like PRG4 0.017 proteoglycan 4 isoform D PRG4 0.017 proteoglycan 4 isoform C BPTF 0.017 bromodomain PHD finger transcription factor isoform ... BPTF 0.017 bromodomain PHD finger transcription factor isoform ... CHD4 0.016 chromodomain helicase DNA binding protein 4 CHD5 0.015 chromodomain helicase DNA binding protein 5 CHD3 0.014 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.014 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.014 chromodomain helicase DNA binding protein 3 isoform... SRRM1 0.014 serine/arginine repetitive matrix 1 LOC100294249 0.014 PREDICTED: hypothetical protein XP_002344067 NSD1 0.013 nuclear receptor binding SET domain protein 1 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.