Guide to the Human Genome
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Name: PHACTR3 Sequence: fasta or formatted (448aa) NCBI GI: 34304356
Description:

phosphatase and actin regulator 3 isoform 3

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [559aa] phosphatase and actin regulator 3 isoform 1
alt prot [518aa] phosphatase and actin regulator 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         30           2
 C cysteine            0.4          2           1
 D aspartate           5.8         26           2
 E glutamate          10.3         46           2
 F phenylalanine       1.6          7           1
 G glycine             3.8         17           2
 H histidine           1.8          8           1
 I isoleucine          3.6         16           2
 K lysine              9.4         42           3
 L leucine            10.0         45           3
 M methionine          1.6          7           2
 N asparagine          3.3         15           1
 P proline             6.2         28           2
 Q glutamine           5.4         24           2
 R arginine           10.7         48           2
 S serine              8.5         38           2
 T threonine           5.8         26           2
 V valine              3.1         14           1
 W tryptophan          0.9          4           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 3 isoform 3 
PHACTR3               0.902   phosphatase and actin regulator 3 isoform 2 
PHACTR3               0.902   phosphatase and actin regulator 3 isoform 1 
PHACTR1               0.393   phosphatase and actin regulator 1 
PHACTR2               0.233   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.233   phosphatase and actin regulator 2 isoform 1 
PHACTR2               0.232   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.232   phosphatase and actin regulator 2 isoform 2 
PHACTR4               0.220   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.220   phosphatase and actin regulator 4 isoform 1 
ENAH                  0.030   enabled homolog isoform a 
ENAH                  0.030   enabled homolog isoform b 
NEFH                  0.029   neurofilament, heavy polypeptide 200kDa 
MAP4K4                0.029   mitogen-activated protein kinase kinase kinase kinas...
LOC100133599          0.026   PREDICTED: hypothetical protein 
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RBM25                 0.024   RNA binding motif protein 25 
TCHH                  0.023   trichohyalin 
ZFC3H1                0.023   proline/serine-rich coiled-coil 2 
INCENP                0.023   inner centromere protein antigens 135/155kDa isofor...
SLTM                  0.023   modulator of estrogen induced transcription isoform ...
SLTM                  0.023   modulator of estrogen induced transcription isoform ...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
MAP7D2                0.023   MAP7 domain containing 2 
RTF1                  0.022   Paf1/RNA polymerase II complex component 
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MAP7                  0.022   microtubule-associated protein 7 
LOC100133599          0.022   PREDICTED: hypothetical protein 
MYH14                 0.022   myosin, heavy chain 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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