Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLA2G4E Sequence: fasta or formatted (839aa) NCBI GI: 122937428
Description:

phospholipase A2, group 4E

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         36           2
 C cysteine            3.6         30           2
 D aspartate           4.5         38           2
 E glutamate           8.6         72           2
 F phenylalanine       4.9         41           2
 G glycine             4.5         38           3
 H histidine           1.9         16           1
 I isoleucine          3.5         29           2
 K lysine              6.1         51           3
 L leucine            11.9        100           2
 M methionine          1.5         13           1
 N asparagine          4.1         34           2
 P proline             6.8         57           2
 Q glutamine           5.0         42           1
 R arginine            5.4         45           4
 S serine              7.0         59           2
 T threonine           6.0         50           2
 V valine              6.3         53           3
 W tryptophan          1.4         12           1
 Y tyrosine            2.7         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group 4E 
PLA2G4D               0.380   phospholipase A2, group IVD 
PLA2G4B               0.354   phospholipase A2, group IVB 
JMJD7-PLA2G4B         0.354   JMJD7-PLA2G4B protein 
PLA2G4F               0.323   phospholipase A2, group IVF 
PLA2G4A               0.156   cytosolic phospholipase A2, group IVA 
PLA2G4C               0.076   phospholipase A2, group IVC isoform 3 
PLA2G4C               0.076   phospholipase A2, group IVC isoform 2 precursor [Ho...
PLA2G4C               0.076   phospholipase A2, group IVC isoform 1 precursor [Ho...
DOC2B                 0.012   double C2-like domains, beta 
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
PRKCB                 0.011   protein kinase C, beta isoform 1 
PRKCB                 0.011   protein kinase C, beta isoform 2 
MCTP1                 0.011   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.011   multiple C2 domains, transmembrane 1 isoform L [Hom...
RPH3A                 0.011   rabphilin 3A homolog isoform 1 
RPH3A                 0.011   rabphilin 3A homolog isoform 2 
MCTP2                 0.010   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
PRKCA                 0.009   protein kinase C, alpha 
PCLO                  0.009   piccolo isoform 2 
PCLO                  0.009   piccolo isoform 1 
NEDD4L                0.009   neural precursor cell expressed, developmentally dow...
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
DOC2A                 0.009   double C2-like domains, alpha 
SYT7                  0.009   synaptotagmin VII 
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
ITSN2                 0.009   intersectin 2 isoform 3 
ITSN2                 0.009   intersectin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press