Guide to the Human Genome
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Name: KRTAP12-1 Sequence: fasta or formatted (96aa) NCBI GI: 32140180
Description:

keratin associated protein 12-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          6           2
 C cysteine           21.9         21           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.0          1           1
 G glycine             3.1          3           1
 H histidine           1.0          1           1
 I isoleucine          2.1          2           1
 K lysine              1.0          1           1
 L leucine             1.0          1           1
 M methionine          1.0          1           1
 N asparagine          0.0          0           0
 P proline            13.5         13           1
 Q glutamine           6.2          6           1
 R arginine            3.1          3           1
 S serine             19.8         19           2
 T threonine           3.1          3           1
 V valine             13.5         13           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 12-1 
KRTAP12-3             0.774   keratin associated protein 12-3 
KRTAP12-2             0.769   keratin associated protein 12-2 
KRTAP12-4             0.385   keratin associated protein 12-4 
KRTAP10-3             0.379   keratin associated protein 10-3 
KRTAP10-5             0.344   keratin associated protein 10-5 
KRTAP10-2             0.338   keratin associated protein 10-2 
KRTAP10-9             0.318   keratin associated protein 10-9 
KRTAP10-12            0.318   keratin associated protein 10-12 
KRTAP4-8              0.313   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.313   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.313   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.313   keratin associated protein 4.8 
KRTAP10-11            0.313   keratin associated protein 10-11 
KRTAP10-1             0.313   keratin associated protein 10-1 
KRTAP4-9              0.303   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.303   PREDICTED: keratin associated protein 4-8 
KRTAP4-4              0.303   keratin associated protein 4.4 
LOC100131696          0.303   PREDICTED: keratin associated protein 
LOC100131696          0.303   PREDICTED: keratin associated protein 
KRTAP4-9              0.303   PREDICTED: keratin associated protein 4-9 isoform 1...
LOC100288060          0.303   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-9              0.297   keratin associated protein 4-9 
KRTAP10-7             0.297   keratin associated protein 10-7 
KRTAP4-8              0.292   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.292   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.292   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.292   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-4             0.292   keratin associated protein 10-4 
KRTAP4-11             0.292   keratin associated protein 4-11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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