Guide to the Human Genome
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Name: FBXW8 Sequence: fasta or formatted (532aa) NCBI GI: 30795121
Description:

F-box and WD repeat domain containing 8 isoform 2

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [598aa] F-box and WD repeat domain containing 8 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         47           3
 C cysteine            1.7          9           1
 D aspartate           7.1         38           2
 E glutamate           6.8         36           2
 F phenylalanine       3.4         18           2
 G glycine             4.9         26           2
 H histidine           3.2         17           1
 I isoleucine          3.6         19           1
 K lysine              3.0         16           2
 L leucine             9.4         50           2
 M methionine          2.3         12           1
 N asparagine          3.6         19           1
 P proline             4.5         24           2
 Q glutamine           4.3         23           2
 R arginine            7.3         39           3
 S serine              7.1         38           2
 T threonine           3.4         18           2
 V valine              8.8         47           2
 W tryptophan          2.4         13           1
 Y tyrosine            4.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 8 isoform 2 [H... 
FBXW8                 0.953   F-box and WD repeat domain containing 8 isoform 1 [H...
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 2 [H...
BTRC                  0.038   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.038   beta-transducin repeat containing protein isoform 1 ...
FBXW11                0.030   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.030   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.030   F-box and WD repeat domain containing 11 isoform B [...
WDR5B                 0.026   WD repeat domain 5B 
WDR5                  0.023   WD repeat domain 5 
WDR5                  0.023   WD repeat domain 5 
FBXW2                 0.022   F-box and WD repeat domain containing 2 
FBXL2                 0.022   F-box and leucine-rich repeat protein 2 
FBXO2                 0.022   F-box only protein 2 
TEP1                  0.020   telomerase-associated protein 1 
FBXL20                0.019   F-box and leucine-rich repeat protein 20 
WDR51B                0.019   WD repeat domain 51B 
SNRNP40               0.019   WD repeat domain 57 (U5 snRNP specific) 
FBXW10                0.018   F-box and WD-40 domain protein 10 
CDRT1                 0.018   CMT1A duplicated region transcript 1 
ECT2L                 0.018   epithelial cell transforming sequence 2 oncogene-li...
WDR3                  0.018   WD repeat-containing protein 3 
FBXO16                0.018   F-box only protein 16 
SCAP                  0.017   SREBF chaperone protein 
AAMP                  0.017   angio-associated, migratory cell protein 
NLE1                  0.017   Notchless gene homolog isoform a 
FBXL7                 0.016   F-box and leucine-rich repeat protein 7 
KATNB1                0.015   katanin p80 subunit B 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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