SCAP 34654

Name: SCAP	Sequence: fasta or formatted (1279aa)		NCBI GI: 66932902
Description: SREBF chaperone protein		Referenced in: Myc and Related Functions Pancreas and Insulin WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 81 3 C cysteine 2.7 34 2 D aspartate 4.4 56 2 E glutamate 5.1 65 2 F phenylalanine 3.4 44 2 G glycine 8.3 106 3 H histidine 2.4 31 1 I isoleucine 4.6 59 2 K lysine 2.7 35 1 L leucine 12.9 165 4 M methionine 1.2 15 1 N asparagine 2.0 25 1 P proline 8.4 108 4 Q glutamine 3.6 46 2 R arginine 6.0 77 4 S serine 8.2 105 3 T threonine 5.6 72 2 V valine 7.8 100 3 W tryptophan 1.6 20 1 Y tyrosine 2.7 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SREBF chaperone protein FBXW7 0.027 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.027 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.027 F-box and WD repeat domain containing 7 isoform 2 [H... NPC1 0.022 Niemann-Pick disease, type C1 precursor WDR86 0.020 WD repeat domain 86 NPC1L1 0.019 Niemann-Pick C1-like protein 1 isoform 2 NPC1L1 0.019 Niemann-Pick C1-like protein 1 isoform 1 PTCH2 0.019 patched 2 WDR5B 0.018 WD repeat domain 5B HMGCR 0.017 3-hydroxy-3-methylglutaryl-Coenzyme A reductase iso... HMGCR 0.017 3-hydroxy-3-methylglutaryl-Coenzyme A reductase isofo... PTCH1 0.017 patched isoform S PTCH1 0.017 patched isoform S PTCH1 0.017 patched isoform S PTCH1 0.017 patched isoform S PTCH1 0.017 patched isoform L' PTCH1 0.017 patched isoform M PTCH1 0.017 patched isoform L WDR5 0.017 WD repeat domain 5 WDR5 0.017 WD repeat domain 5 BTRC 0.016 beta-transducin repeat containing protein isoform 2 [... BTRC 0.016 beta-transducin repeat containing protein isoform 1 ... FBXW11 0.016 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.016 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.016 F-box and WD repeat domain containing 11 isoform B [... WDR69 0.015 WD repeat domain 69 PAK1IP1 0.015 PAK1 interacting protein 1 WDR38 0.012 WD repeat domain 38 APAF1 0.012 apoptotic peptidase activating factor 1 isoform d [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.