Guide to the Human Genome
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Name: MCRS1 Sequence: fasta or formatted (462aa) NCBI GI: 29893564
Description:

microspherule protein 1 isoform 1

Referenced in:

Additional Brain Proteins
Nucleus and Nucleolus

Other entries for this name:
alt prot [475aa] microspherule protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         37           2
 C cysteine            0.9          4           1
 D aspartate           6.7         31           2
 E glutamate           5.8         27           2
 F phenylalanine       2.8         13           2
 G glycine             4.8         22           1
 H histidine           1.5          7           1
 I isoleucine          4.5         21           1
 K lysine              8.0         37           3
 L leucine            11.7         54           3
 M methionine          1.9          9           1
 N asparagine          2.4         11           2
 P proline             5.0         23           2
 Q glutamine           6.1         28           1
 R arginine            7.4         34           2
 S serine             10.0         46           3
 T threonine           4.1         19           1
 V valine              5.6         26           2
 W tryptophan          1.3          6           1
 Y tyrosine            1.5          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microspherule protein 1 isoform 1 
MCRS1                 0.993   microspherule protein 1 isoform 2 
ATRX                  0.015   transcriptional regulator ATRX isoform 2 
ATRX                  0.015   transcriptional regulator ATRX isoform 1 
WAC                   0.014   WW domain-containing adapter with a coiled-coil regi...
SRRM2                 0.014   splicing coactivator subunit SRm300 
NOLC1                 0.014   nucleolar and coiled-body phosphoprotein 1 
LOC100293608          0.013   PREDICTED: similar to HSPC088 
CDKN2AIP              0.013   CDKN2A interacting protein 
SFRS4                 0.011   splicing factor, arginine/serine-rich 4 
SCAF1                 0.011   SR-related CTD-associated factor 1 
IL16                  0.011   interleukin 16 isoform 2 
PALM                  0.011   paralemmin isoform 1 
TNRC18                0.011   trinucleotide repeat containing 18 
PHOX2A                0.011   paired-like homeobox 2a 
GEFT                  0.011   RhoA/RAC/CDC42 exchange factor isoform 3 
FOXK1                 0.011   forkhead box K1 
RAPH1                 0.011   Ras association and pleckstrin homology domains 1 is...
BCL11B                0.010   B-cell CLL/lymphoma 11B isoform 1 
BCL11B                0.010   B-cell CLL/lymphoma 11B isoform 2 
FOXK2                 0.010   forkhead box K2 
ZNF853                0.010   zinc finger protein 853 
LOC100292378          0.009   PREDICTED: hypothetical protein 
LOC100289737          0.009   PREDICTED: hypothetical protein XP_002347183 
LOC100288678          0.009   PREDICTED: hypothetical protein XP_002343039 
FHAD1                 0.009   forkhead-associated (FHA) phosphopeptide binding do...
GARNL4                0.009   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.009   GTPase activating Rap/RanGAP domain-like 4 isoform ...
AFF4                  0.009   ALL1 fused gene from 5q31 
LOC402360             0.009   PREDICTED: similar to hCG1742476 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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