Guide to the Human Genome
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Name: FBXO46 Sequence: fasta or formatted (603aa) NCBI GI: 122937335
Description:

F-box protein 46

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         60           4
 C cysteine            3.3         20           2
 D aspartate           6.0         36           2
 E glutamate           6.5         39           2
 F phenylalanine       3.2         19           2
 G glycine            10.4         63           4
 H histidine           2.5         15           2
 I isoleucine          1.8         11           2
 K lysine              4.1         25           1
 L leucine             7.1         43           3
 M methionine          0.8          5           1
 N asparagine          1.7         10           2
 P proline            12.9         78           5
 Q glutamine           2.5         15           1
 R arginine            8.3         50           4
 S serine              6.6         40           2
 T threonine           3.6         22           2
 V valine              5.5         33           3
 W tryptophan          1.2          7           1
 Y tyrosine            2.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 46 
FBXO34                0.210   F-box only protein 34 
FBXO34                0.210   F-box only protein 34 
COL1A1                0.031   alpha 1 type I collagen preproprotein 
LMTK3                 0.026   lemur tyrosine kinase 3 
ZIC5                  0.024   zinc finger protein of the cerebellum 5 
COL11A2               0.022   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.022   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.022   collagen, type XI, alpha 2 isoform 1 preproprotein ...
C2orf55               0.019   hypothetical protein LOC343990 
TNRC18                0.019   trinucleotide repeat containing 18 
TAF4                  0.018   TBP-associated factor 4 
COL4A4                0.018   alpha 4 type IV collagen precursor 
MARCKS                0.018   myristoylated alanine-rich protein kinase C substra...
COL22A1               0.017   collagen, type XXII, alpha 1 
COL5A2                0.016   alpha 2 type V collagen preproprotein 
SHANK1                0.016   SH3 and multiple ankyrin repeat domains 1 
LOC100293055          0.016   PREDICTED: similar to COL22A1 protein 
COL3A1                0.015   collagen type III alpha 1 preproprotein 
COL11A1               0.015   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.015   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.015   alpha 1 type XI collagen isoform A preproprotein [Ho...
KIAA1602              0.014   hypothetical protein LOC57701 
ZNF219                0.014   zinc finger protein 219 
ZNF219                0.014   zinc finger protein 219 
ZNF219                0.014   zinc finger protein 219 
MLL4                  0.014   myeloid/lymphoid or mixed-lineage leukemia 4 
SFPQ                  0.014   splicing factor proline/glutamine rich (polypyrimidin...
RANBP9                0.014   RAN binding protein 9 
WIPF3                 0.014   WAS/WASL interacting protein family, member 3 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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