Guide to the Human Genome
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Name: IKZF4 Sequence: fasta or formatted (585aa) NCBI GI: 122891864
Description:

zinc finger protein, subfamily 1A, 4

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         21           1
 C cysteine            3.6         21           1
 D aspartate           5.1         30           2
 E glutamate           7.4         43           2
 F phenylalanine       3.4         20           1
 G glycine             9.6         56           3
 H histidine           4.6         27           2
 I isoleucine          2.6         15           1
 K lysine              4.4         26           1
 L leucine             8.7         51           2
 M methionine          1.9         11           1
 N asparagine          2.9         17           1
 P proline             9.6         56           3
 Q glutamine           3.6         21           2
 R arginine            6.7         39           3
 S serine             10.6         62           3
 T threonine           3.8         22           1
 V valine              5.6         33           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein, subfamily 1A, 4 
IKZF2                 0.449   helios isoform 1 
IKZF2                 0.390   helios isoform 2 
IKZF1                 0.390   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF3                 0.320   aiolos isoform 1 
IKZF3                 0.286   aiolos isoform 4 
IKZF3                 0.204   aiolos isoform 2 
IKZF3                 0.192   aiolos isoform 3 
IKZF3                 0.162   aiolos isoform 5 
IKZF3                 0.142   aiolos isoform 6 
ZNF248                0.077   zinc finger protein 248 
ZNF509                0.073   zinc finger protein 509 
ZNF568                0.072   zinc finger protein 568 
ZNF813                0.072   zinc finger protein 813 
ZNF677                0.071   zinc finger protein 677 
ZNF66                 0.069   PREDICTED: zinc finger protein 66 
ZNF66                 0.069   PREDICTED: zinc finger protein 66 
ZNF66                 0.069   PREDICTED: zinc finger protein 66 
ZNF274                0.069   zinc finger protein 274 isoform c 
ZNF274                0.069   zinc finger protein 274 isoform a 
ZNF274                0.069   zinc finger protein 274 isoform b 
ZNF841                0.069   zinc finger protein 841 
ZNF192                0.069   zinc finger protein 192 
ZNF92                 0.069   zinc finger protein 92 isoform 1 
ZNF92                 0.069   zinc finger protein 92 isoform 2 
ZNF852                0.069   PREDICTED: zinc finger protein 852 
ZNF852                0.069   PREDICTED: zinc finger protein 852 
ZNF852                0.069   PREDICTED: zinc finger protein 852 
ZNF43                 0.069   zinc finger protein 43 
ZNF167                0.069   zinc finger protein 167 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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