Guide to the Human Genome
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Name: ZNF509 Sequence: fasta or formatted (765aa) NCBI GI: 223972645
Description:

zinc finger protein 509

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         46           2
 C cysteine            4.3         33           1
 D aspartate           5.1         39           2
 E glutamate           6.7         51           2
 F phenylalanine       3.7         28           2
 G glycine             5.1         39           2
 H histidine           5.1         39           2
 I isoleucine          2.7         21           3
 K lysine              6.8         52           2
 L leucine             8.5         65           2
 M methionine          2.0         15           1
 N asparagine          4.1         31           1
 P proline             5.5         42           2
 Q glutamine           7.1         54           2
 R arginine            3.8         29           2
 S serine             11.1         85           3
 T threonine           5.2         40           2
 V valine              5.0         38           2
 W tryptophan          0.1          1           1
 Y tyrosine            2.2         17           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 509 
ZNF675                0.139   zinc finger protein 675 
ZNF91                 0.138   zinc finger protein 91 
ZNF43                 0.132   zinc finger protein 43 
ZNF679                0.132   zinc finger protein 679 
ZNF429                0.132   zinc finger protein 429 
ZNF226                0.132   zinc finger protein 226 isoform a 
ZNF226                0.132   zinc finger protein 226 isoform a 
LOC654254             0.132   zinc finger protein LOC654254 
ZNF681                0.131   zinc finger protein 681 
LOC100292052          0.131   PREDICTED: similar to hCG1773661 
LOC100287226          0.131   PREDICTED: similar to hCG1773661 
LOC100287226          0.131   PREDICTED: hypothetical protein XP_002343677 
ZNF56                 0.131   PREDICTED: zinc finger protein 56 
ZNF56                 0.131   PREDICTED: zinc finger protein 56 
ZNF782                0.130   zinc finger protein 782 
ZNF726                0.130   PREDICTED: zinc finger protein 726 
ZNF726                0.130   PREDICTED: zinc finger protein 726 
ZNF726                0.130   PREDICTED: zinc finger protein 726 
ZNF98                 0.130   zinc finger protein 98 
ZNF85                 0.130   zinc finger protein 85 
ZNF430                0.130   zinc finger protein 430 
ZNF100                0.130   zinc finger protein 100 
ZNF852                0.130   PREDICTED: zinc finger protein 852 
ZNF852                0.130   PREDICTED: zinc finger protein 852 
ZNF852                0.130   PREDICTED: zinc finger protein 852 
ZNF436                0.130   zinc finger protein 436 
ZFP2                  0.130   zinc finger protein 2 homolog 
ZNF436                0.130   zinc finger protein 436 
ZNF56                 0.130   PREDICTED: zinc finger protein 56 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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