Guide to the Human Genome
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Name: ZNF248 Sequence: fasta or formatted (579aa) NCBI GI: 32698748
Description:

zinc finger protein 248

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         15           2
 C cysteine            5.5         32           1
 D aspartate           3.5         20           2
 E glutamate           9.0         52           2
 F phenylalanine       4.8         28           2
 G glycine             6.2         36           2
 H histidine           5.0         29           1
 I isoleucine          4.5         26           2
 K lysine             10.2         59           2
 L leucine             6.0         35           3
 M methionine          0.9          5           1
 N asparagine          5.9         34           2
 P proline             3.5         20           1
 Q glutamine           5.0         29           1
 R arginine            4.5         26           2
 S serine              7.3         42           2
 T threonine           6.7         39           1
 V valine              3.8         22           1
 W tryptophan          1.0          6           1
 Y tyrosine            4.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 248 
ZNF33B                0.456   zinc finger protein 33B 
ZNF33A                0.454   zinc finger protein 33A isoform a 
ZNF33A                0.452   zinc finger protein 33A isoform b 
ZNF12                 0.433   zinc finger protein 12 isoform a 
ZNF510                0.410   zinc finger protein 510 
ZNF334                0.400   zinc finger protein 334 isoform a 
ZNF12                 0.398   zinc finger protein 12 isoform b 
LOC100287163          0.394   PREDICTED: hypothetical protein XP_002343923 
LOC100287429          0.390   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.390   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.390   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.390   zinc finger protein 84 
ZNF84                 0.390   zinc finger protein 84 
ZNF782                0.385   zinc finger protein 782 
RBAK                  0.384   RB-associated KRAB repressor 
ZNF717                0.384   zinc finger protein 717 
ZNF300                0.376   zinc finger protein 300 
ZNF37A                0.376   zinc finger protein 37a 
ZNF37A                0.376   zinc finger protein 37a 
ZNF658                0.368   zinc finger protein 658 
ZNF382                0.362   zinc finger protein 382 
ZNF674                0.361   zinc finger family member 674 isoform 1 
ZNF334                0.361   zinc finger protein 334 isoform b 
ZNF674                0.359   zinc finger family member 674 isoform 2 
ZNF569                0.359   zinc finger protein 569 
ZNF568                0.358   zinc finger protein 568 
ZNF630                0.356   zinc finger protein 630 
ZNF182                0.349   zinc finger protein 21 isoform 2 
ZNF567                0.349   zinc finger protein 567 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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