Guide to the Human Genome
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Name: DDX24 Sequence: fasta or formatted (859aa) NCBI GI: 9966805
Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 24

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         71           4
 C cysteine            1.3         11           1
 D aspartate           5.4         46           3
 E glutamate           8.5         73           7
 F phenylalanine       2.4         21           1
 G glycine             4.7         40           2
 H histidine           2.0         17           1
 I isoleucine          4.1         35           1
 K lysine             11.3         97           4
 L leucine            10.0         86           2
 M methionine          2.3         20           1
 N asparagine          2.7         23           1
 P proline             6.3         54           3
 Q glutamine           5.7         49           2
 R arginine            5.0         43           3
 S serine              6.2         53           3
 T threonine           6.1         52           1
 V valine              5.5         47           2
 W tryptophan          0.7          6           1
 Y tyrosine            1.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 
DDX47                 0.094   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX49                 0.083   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX27                 0.075   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX18                 0.074   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
DDX41                 0.069   DEAD-box protein abstrakt 
DDX47                 0.067   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX17                 0.066   DEAD box polypeptide 17 isoform 1 
DDX17                 0.066   DEAD box polypeptide 17 isoform 3 
DDX10                 0.064   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
DDX54                 0.064   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.064   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX5                  0.063   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX42                 0.063   DEAD box polypeptide 42 protein 
DDX42                 0.063   DEAD box polypeptide 42 protein 
DDX55                 0.062   DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 
EIF4A3                0.059   eukaryotic translation initiation factor 4A, isoform ...
DDX46                 0.058   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX56                 0.058   DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 
DDX43                 0.057   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX23                 0.056   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX3X                 0.056   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX31                 0.056   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...
DDX3Y                 0.054   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.054   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX28                 0.054   DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 
EIF4A2                0.054   eukaryotic translation initiation factor 4A2 
EIF4A1                0.054   eukaryotic translation initiation factor 4A isoform 1...
DDX50                 0.053   nucleolar protein GU2 
DDX39                 0.052   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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