Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DDX3X Sequence: fasta or formatted (662aa) NCBI GI: 87196351
Description:

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3

Referenced in:

DEAD / H Helicase Family
Gene Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         37           2
 C cysteine            1.1          7           1
 D aspartate           7.3         48           2
 E glutamate           6.2         41           2
 F phenylalanine       4.7         31           2
 G glycine            11.5         76           4
 H histidine           2.1         14           2
 I isoleucine          4.7         31           2
 K lysine              4.8         32           2
 L leucine             7.1         47           2
 M methionine          2.1         14           2
 N asparagine          3.6         24           2
 P proline             3.6         24           2
 Q glutamine           3.0         20           2
 R arginine            8.3         55           2
 S serine             11.3         75           4
 T threonine           3.6         24           1
 V valine              4.7         31           2
 W tryptophan          1.1          7           2
 Y tyrosine            3.6         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 
DDX3Y                 0.923   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.923   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX4                  0.324   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX4                  0.321   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.321   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX17                 0.234   DEAD box polypeptide 17 isoform 3 
DDX17                 0.234   DEAD box polypeptide 17 isoform 1 
DDX5                  0.229   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX46                 0.203   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX41                 0.203   DEAD-box protein abstrakt 
DDX23                 0.194   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX43                 0.189   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX42                 0.184   DEAD box polypeptide 42 protein 
DDX42                 0.184   DEAD box polypeptide 42 protein 
DDX53                 0.171   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX59                 0.157   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX27                 0.145   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX47                 0.143   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
EIF4A3                0.140   eukaryotic translation initiation factor 4A, isoform ...
DDX52                 0.137   ATP-dependent RNA helicase ROK1 isoform a 
DDX52                 0.136   ATP-dependent RNA helicase ROK1 isoform b 
EIF4A1                0.131   eukaryotic translation initiation factor 4A isoform 1...
EIF4A2                0.130   eukaryotic translation initiation factor 4A2 
DDX21                 0.124   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX54                 0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX49                 0.122   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX50                 0.121   nucleolar protein GU2 
DDX6                  0.118   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press