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Search of human proteins with 29171717
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29171717 glycosylphosphatidylinositol specific phospholipase
D1 isoform 1 precursor [Homo sapiens]
(840 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29171717 glycosylphosphatidylinositol specific phospholipase ... 1720 0.0
gi|29171719 glycosylphosphatidylinositol specific phospholipase ... 352 8e-97
gi|56237029 integrin alpha 5 precursor [Homo sapiens] 74 4e-13
gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens] 71 4e-12
gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens] 71 4e-12
gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens] 71 4e-12
gi|167466217 integrin alpha L isoform b precursor [Homo sapiens] 65 3e-10
gi|167466215 integrin alpha L isoform a precursor [Homo sapiens] 65 3e-10
gi|4504747 integrin alpha 3 isoform a precursor [Homo sapiens] 63 1e-09
gi|6006011 integrin alpha 3 isoform b precursor [Homo sapiens] 63 1e-09
gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens] 62 3e-09
gi|223468595 integrin alpha-V isoform 2 [Homo sapiens] 62 3e-09
gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens] 62 3e-09
gi|119395740 integrin alpha chain, alpha 6 isoform a precursor [... 59 1e-08
gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [... 59 1e-08
gi|52485941 integrin, alpha 9 precursor [Homo sapiens] 59 2e-08
gi|62548866 integrin, alpha D precursor [Homo sapiens] 57 9e-08
gi|116295258 integrin alpha 2 precursor [Homo sapiens] 55 3e-07
gi|88501734 integrin alpha M isoform 2 precursor [Homo sapiens] 55 4e-07
gi|88758615 integrin alpha 2b preproprotein [Homo sapiens] 54 5e-07
gi|38569398 integrin, alpha 10 precursor [Homo sapiens] 54 8e-07
gi|224831239 integrin alpha M isoform 1 precursor [Homo sapiens] 52 2e-06
gi|67191027 integrin alpha 4 precursor [Homo sapiens] 52 2e-06
gi|31657142 integrin, alpha 1 precursor [Homo sapiens] 51 4e-06
gi|52485853 integrin, alpha 11 precursor [Homo sapiens] 48 3e-05
gi|49170034 integrin, alpha 8 [Homo sapiens] 48 4e-05
gi|148728188 integrin, alpha E precursor [Homo sapiens] 46 2e-04
gi|34452173 integrin alpha X precursor [Homo sapiens] 45 3e-04
gi|21450863 attractin isoform 2 [Homo sapiens] 30 9.3
gi|21450861 attractin isoform 1 [Homo sapiens] 30 9.3
>gi|29171717 glycosylphosphatidylinositol specific phospholipase D1
isoform 1 precursor [Homo sapiens]
Length = 840
Score = 1720 bits (4454), Expect = 0.0
Identities = 840/840 (100%), Positives = 840/840 (100%)
Query: 1 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 60
MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY
Sbjct: 1 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 60
Query: 61 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 120
QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF
Sbjct: 61 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 120
Query: 121 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR 180
GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR
Sbjct: 121 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYLAR 180
Query: 181 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV 240
RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV
Sbjct: 181 RWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLV 240
Query: 241 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ 300
EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ
Sbjct: 241 EQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQ 300
Query: 301 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL 360
KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL
Sbjct: 301 KNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQL 360
Query: 361 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY 420
SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY
Sbjct: 361 SQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY 420
Query: 421 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT 480
GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT
Sbjct: 421 GNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLT 480
Query: 481 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG 540
YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG
Sbjct: 481 YKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGG 540
Query: 541 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP 600
GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP
Sbjct: 541 GKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSP 600
Query: 601 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG 660
TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG
Sbjct: 601 TWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNG 660
Query: 661 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG 720
TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG
Sbjct: 661 TLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGG 720
Query: 721 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT 780
VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT
Sbjct: 721 VLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWIT 780
Query: 781 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD 840
PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD
Sbjct: 781 PCPEEKAQYVLISPEASSRFGSSLITVRSKAKNQVVIAAGRSSLGARLSGALHVYSLGSD 840
>gi|29171719 glycosylphosphatidylinositol specific phospholipase D1
isoform 2 precursor [Homo sapiens]
Length = 176
Score = 352 bits (903), Expect = 8e-97
Identities = 166/173 (95%), Positives = 166/173 (95%)
Query: 1 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 60
MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY
Sbjct: 1 MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNGRVNYRELLLEHQDAY 60
Query: 61 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 120
QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF
Sbjct: 61 QAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLF 120
Query: 121 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEF 173
GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFG L F
Sbjct: 121 GITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDFGTVYLHLLNF 173
>gi|56237029 integrin alpha 5 precursor [Homo sapiens]
Length = 1049
Score = 74.3 bits (181), Expect = 4e-13
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 381 LGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRI 440
LG+++ + + D D V G P G++ G V ++ G+D+ +
Sbjct: 272 LGYSVAVGEFSGDDTEDFVAGVP----KGNLTYGYVTILNGSDI-----------RSLYN 316
Query: 441 LEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSV------GSEQLTYKGAVYVYFGSKQG 494
G Q + FG A+A D N DG+ DL VGAP + G Q G VYVY
Sbjct: 317 FSGEQMASYFGYAVAATDVNGDGLDDLLVGAPLLMDRTPDGRPQEV--GRVYVYL-QHPA 373
Query: 495 GMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSG 553
G+ +P +T++ D + G +L D++ D D+ IG+PF GG Q+G+V F G
Sbjct: 374 GIEPTPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIGAPF--GGETQQGVVFVFPGG 431
Query: 554 PSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG 586
P + V W DF FG +L G
Sbjct: 432 PGGLGSKPSQVLQPLWAASHTPDF--FGSALRG 462
Score = 69.7 bits (169), Expect = 1e-11
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 37/180 (20%)
Query: 369 LASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGY------SRPGHIHIGRVYLIYGN 422
+ASYF G+A+ + D+N DG DL+VGAP RP + GRVY+ +
Sbjct: 322 MASYF--------GYAVAATDVNGDGLDDLLVGAPLLMDRTPDGRPQEV--GRVYVYLQH 371
Query: 423 DLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTY 481
G+ P L G GRFGS+L L D + DG D+A+GAP G Q
Sbjct: 372 PAGIEPTPT-------LTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIGAPFGGETQ--- 421
Query: 482 KGAVYVYFGSKQGGMSSSPNITISCQDIYCN------LGWTLLAA-DVNGDSEPDLVIGS 534
+G V+V+ G GG+ S P+ + Q ++ G L D++G+ PDL++GS
Sbjct: 422 QGVVFVFPGGP-GGLGSKPSQVL--QPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGS 478
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 706 LSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVY 761
L FSG++ S FG + +D++ DGLD++++ APL + D T E GRVYVY
Sbjct: 314 LYNFSGEQMASYFGYAVAATDVNGDGLDDLLVGAPL-LMDRTPDGRPQEVGRVYVY 368
Score = 38.9 bits (89), Expect = 0.020
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 625 YGYFPP-NG---QSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVA 680
YGY NG +S + SG++ G ++++ V NG LLVGAP D +
Sbjct: 300 YGYVTILNGSDIRSLYNFSGEQMASYFGYAVAATDV--NGDGLDDLLVGAPLLMDRTPDG 357
Query: 681 FLTVTLHQGGATRMYAL-TSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDGLDEIIMA 738
+ G +Y + +P T +G F RFG L L DLD DG +++ +
Sbjct: 358 ----RPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIG 413
Query: 739 APLRIADVTSGLIGGE--DGRVYVYNGKETTLG 769
AP GGE G V+V+ G LG
Sbjct: 414 AP----------FGGETQQGVVFVFPGGPGGLG 436
>gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens]
Length = 1044
Score = 71.2 bits (173), Expect = 4e-12
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY---GNDLGLPPVDLDLDKEAH 438
G+++ ADLN DG DL+VGAP + G VY+ G+ G+ P+ L
Sbjct: 228 GYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRL------- 280
Query: 439 RILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMS 497
P FG +LAVL D N DG PD+AVGAP G G V++Y GS G ++
Sbjct: 281 ----CGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGD------GKVFIYHGSSLGVVA 330
Query: 498 SSPNITISCQDIYCNLGWTLLAA-DVNGDSEPDLVIGS 534
+ + G++L + D++G+ PDL++GS
Sbjct: 331 KPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 368
Score = 65.1 bits (157), Expect = 3e-10
Identities = 59/164 (35%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 440 ILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSS 499
+L G + + FG +LAV D N DG PDL VGAP Q GAVYVY S
Sbjct: 217 MLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGIS 276
Query: 500 PNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDK 559
P D + +L D+N D PD+ +G+PF G GK Y G SL
Sbjct: 277 PLRLCGSPDSMFGISLAVL-GDLNQDGFPDIAVGAPF-DGDGK-----VFIYHGSSLG-- 327
Query: 560 EKLNVEAANWTVRGEE-DFSWFGYSLHG-VTVDNRTL--LLVGS 599
V + + GE FGYSL G + +D LLVGS
Sbjct: 328 ---VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 368
Score = 41.6 bits (96), Expect = 0.003
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 475 GSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGS 534
G+ + +KGAV + K P + +S + + G++L AD+N D PDL++G+
Sbjct: 191 GAPRANHKGAVVIL--RKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGA 248
Query: 535 PF 536
P+
Sbjct: 249 PY 250
Score = 31.2 bits (69), Expect = 4.2
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 572 RGEEDFSWFGYSLHGVTVDNRTLLLVGSP---TWKNASRL-------GHLLHIRD----- 616
+G E F + + LL G+P WK +R+ L H+ D
Sbjct: 92 QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEA 151
Query: 617 --EKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYD 674
EK+ R+ P S+F G S+ SG L+ + + GAP +
Sbjct: 152 GGEKEQDPRL---IPVPANSYF-----------GFSIDSGKGLVRAE-ELSFVAGAPRAN 196
Query: 675 DVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDE 734
V V L + A+R+ P ++ SG+R S FG L ++DL+ DG +
Sbjct: 197 HKGAV----VILRKDSASRLV-------PEVM--LSGERLTSGFGYSLAVADLNSDGWPD 243
Query: 735 IIMAAP 740
+I+ AP
Sbjct: 244 LIVGAP 249
>gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]
Length = 1141
Score = 71.2 bits (173), Expect = 4e-12
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY---GNDLGLPPVDLDLDKEAH 438
G+++ ADLN DG DL+VGAP + G VY+ G+ G+ P+ L
Sbjct: 325 GYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRL------- 377
Query: 439 RILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMS 497
P FG +LAVL D N DG PD+AVGAP G G V++Y GS G ++
Sbjct: 378 ----CGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGD------GKVFIYHGSSLGVVA 427
Query: 498 SSPNITISCQDIYCNLGWTLLAA-DVNGDSEPDLVIGS 534
+ + G++L + D++G+ PDL++GS
Sbjct: 428 KPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 465
Score = 65.1 bits (157), Expect = 3e-10
Identities = 59/164 (35%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 440 ILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSS 499
+L G + + FG +LAV D N DG PDL VGAP Q GAVYVY S
Sbjct: 314 MLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGIS 373
Query: 500 PNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDK 559
P D + +L D+N D PD+ +G+PF G GK Y G SL
Sbjct: 374 PLRLCGSPDSMFGISLAVL-GDLNQDGFPDIAVGAPF-DGDGK-----VFIYHGSSLG-- 424
Query: 560 EKLNVEAANWTVRGEE-DFSWFGYSLHG-VTVDNRTL--LLVGS 599
V + + GE FGYSL G + +D LLVGS
Sbjct: 425 ---VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 465
Score = 41.6 bits (96), Expect = 0.003
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 475 GSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGS 534
G+ + +KGAV + K P + +S + + G++L AD+N D PDL++G+
Sbjct: 288 GAPRANHKGAVVIL--RKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGA 345
Query: 535 PF 536
P+
Sbjct: 346 PY 347
Score = 31.2 bits (69), Expect = 4.2
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 572 RGEEDFSWFGYSLHGVTVDNRTLLLVGSP---TWKNASRL-------GHLLHIRD----- 616
+G E F + + LL G+P WK +R+ L H+ D
Sbjct: 189 QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEA 248
Query: 617 --EKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYD 674
EK+ R+ P S+F G S+ SG L+ + + GAP +
Sbjct: 249 GGEKEQDPRL---IPVPANSYF-----------GFSIDSGKGLVRAE-ELSFVAGAPRAN 293
Query: 675 DVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDE 734
V V L + A+R+ P ++ SG+R S FG L ++DL+ DG +
Sbjct: 294 HKGAV----VILRKDSASRLV-------PEVM--LSGERLTSGFGYSLAVADLNSDGWPD 340
Query: 735 IIMAAP 740
+I+ AP
Sbjct: 341 LIVGAP 346
>gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]
Length = 1137
Score = 71.2 bits (173), Expect = 4e-12
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY---GNDLGLPPVDLDLDKEAH 438
G+++ ADLN DG DL+VGAP + G VY+ G+ G+ P+ L
Sbjct: 321 GYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRL------- 373
Query: 439 RILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMS 497
P FG +LAVL D N DG PD+AVGAP G G V++Y GS G ++
Sbjct: 374 ----CGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGD------GKVFIYHGSSLGVVA 423
Query: 498 SSPNITISCQDIYCNLGWTLLAA-DVNGDSEPDLVIGS 534
+ + G++L + D++G+ PDL++GS
Sbjct: 424 KPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 461
Score = 65.1 bits (157), Expect = 3e-10
Identities = 59/164 (35%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 440 ILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSS 499
+L G + + FG +LAV D N DG PDL VGAP Q GAVYVY S
Sbjct: 310 MLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGIS 369
Query: 500 PNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDK 559
P D + +L D+N D PD+ +G+PF G GK Y G SL
Sbjct: 370 PLRLCGSPDSMFGISLAVL-GDLNQDGFPDIAVGAPF-DGDGK-----VFIYHGSSLG-- 420
Query: 560 EKLNVEAANWTVRGEE-DFSWFGYSLHG-VTVDNRTL--LLVGS 599
V + + GE FGYSL G + +D LLVGS
Sbjct: 421 ---VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGS 461
Score = 41.6 bits (96), Expect = 0.003
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 475 GSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGS 534
G+ + +KGAV + K P + +S + + G++L AD+N D PDL++G+
Sbjct: 284 GAPRANHKGAVVIL--RKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGA 341
Query: 535 PF 536
P+
Sbjct: 342 PY 343
Score = 33.5 bits (75), Expect = 0.84
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 639 SGDKAMGK-LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYAL 697
+GD A+ LG S+ SG L+ + + GAP + V V L + A+R+
Sbjct: 254 AGDLALNSYLGFSIDSGKGLVRAE-ELSFVAGAPRANHKGAV----VILRKDSASRLV-- 306
Query: 698 TSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAP 740
P ++ SG+R S FG L ++DL+ DG ++I+ AP
Sbjct: 307 -----PEVM--LSGERLTSGFGYSLAVADLNSDGWPDLIVGAP 342
>gi|167466217 integrin alpha L isoform b precursor [Homo sapiens]
Length = 1086
Score = 64.7 bits (156), Expect = 3e-10
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 356 GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGHGDLV-VGAPGYSRPGHIH 412
GG SQ + + SYF G + D++QDG +L+ +GAP + G
Sbjct: 358 GGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGETELLLIGAPLFY--GEQR 407
Query: 413 IGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGA 471
GRV++ LG V +L + G+ P GRFG A+ L D N DG+ D+AVGA
Sbjct: 408 GGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAITALTDINGDGLVDVAVGA 460
Query: 472 PSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLA----ADVNGDSE 527
P L +GAVY+ F + GG+S P+ I + + W + D+ GD
Sbjct: 461 P------LEEQGAVYI-FNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGL 513
Query: 528 PDLVIGS 534
D+ +G+
Sbjct: 514 ADVAVGA 520
Score = 47.0 bits (110), Expect = 7e-05
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 376 FPYARLGWAMTS-ADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLD 434
+P R G A+T+ D+N DG D+ VGAP + G VY+ G GL P
Sbjct: 433 YPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ------GAVYIFNGRHGGLSPQPSQRI 486
Query: 435 KEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPS 473
E ++L G Q GR S V D DG+ D+AVGA S
Sbjct: 487 -EGTQVLSGIQWFGR--SIHGVKDLEGDGLADVAVGAES 522
Score = 40.0 bits (92), Expect = 0.009
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 37/198 (18%)
Query: 398 LVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL 457
L GAP Y H+GRV L G + + + G Q FG L +
Sbjct: 337 LASGAPRYQ-----HMGRVLLFQEPQGGGHWSQV-------QTIHGTQIGSYFGGELCGV 384
Query: 458 DFNVDGVPDLA-VGAPSVGSEQLTYKGAVYVYFGSKQG-----GMSSSPNITISCQDIYC 511
D + DG +L +GAP EQ G V++Y + G + P +
Sbjct: 385 DVDQDGETELLLIGAPLFYGEQRG--GRVFIYQRRQLGFEEVSELQGDPGYPLG------ 436
Query: 512 NLGWTLLA-ADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYS-GPSLSDKEKLNVEAANW 569
G + A D+NGD D+ +G+P +++G V F LS + +E
Sbjct: 437 RFGEAITALTDINGDGLVDVAVGAPL-----EEQGAVYIFNGRHGGLSPQPSQRIEGTQV 491
Query: 570 TVRGEEDFSWFGYSLHGV 587
WFG S+HGV
Sbjct: 492 L----SGIQWFGRSIHGV 505
Score = 35.4 bits (80), Expect = 0.22
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 45/193 (23%)
Query: 579 WFGYSLHGVTVDNRTLLLV-GSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWF- 636
+ GY++ + +T LL G+P +++ +G +L ++ P G W
Sbjct: 320 YLGYTVTWLPSRQKTSLLASGAPRYQH---MGRVLLFQE------------PQGGGHWSQ 364
Query: 637 --TISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRM 694
TI G + G L V +G ++LL+GAP + + GG +
Sbjct: 365 VQTIHGTQIGSYFGGELCGVDVDQDGET-ELLLIGAPLFYGEQR----------GGRVFI 413
Query: 695 YALTSDAQPLLLSTFSGDRRF--SRFG-GVLHLSDLDDDGLDEIIMAAPLRIADVTSGLI 751
Y + S GD + RFG + L+D++ DGL ++ + APL
Sbjct: 414 YQRRQLGFEEV-SELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLE--------- 463
Query: 752 GGEDGRVYVYNGK 764
E G VY++NG+
Sbjct: 464 --EQGAVYIFNGR 474
>gi|167466215 integrin alpha L isoform a precursor [Homo sapiens]
Length = 1170
Score = 64.7 bits (156), Expect = 3e-10
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 356 GGSQLSQKHV--SSPLASYFLSFPYARLGWAMTSADLNQDGHGDLV-VGAPGYSRPGHIH 412
GG SQ + + SYF G + D++QDG +L+ +GAP + G
Sbjct: 441 GGGHWSQVQTIHGTQIGSYF--------GGELCGVDVDQDGETELLLIGAPLFY--GEQR 490
Query: 413 IGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGA 471
GRV++ LG V +L + G+ P GRFG A+ L D N DG+ D+AVGA
Sbjct: 491 GGRVFIYQRRQLGFEEVS-ELQGDP-----GY-PLGRFGEAITALTDINGDGLVDVAVGA 543
Query: 472 PSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLA----ADVNGDSE 527
P L +GAVY+ F + GG+S P+ I + + W + D+ GD
Sbjct: 544 P------LEEQGAVYI-FNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGL 596
Query: 528 PDLVIGS 534
D+ +G+
Sbjct: 597 ADVAVGA 603
Score = 47.0 bits (110), Expect = 7e-05
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 376 FPYARLGWAMTS-ADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLD 434
+P R G A+T+ D+N DG D+ VGAP + G VY+ G GL P
Sbjct: 516 YPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ------GAVYIFNGRHGGLSPQPSQRI 569
Query: 435 KEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPS 473
E ++L G Q GR S V D DG+ D+AVGA S
Sbjct: 570 -EGTQVLSGIQWFGR--SIHGVKDLEGDGLADVAVGAES 605
Score = 40.0 bits (92), Expect = 0.009
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 37/198 (18%)
Query: 398 LVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL 457
L GAP Y H+GRV L G + + + G Q FG L +
Sbjct: 420 LASGAPRYQ-----HMGRVLLFQEPQGGGHWSQV-------QTIHGTQIGSYFGGELCGV 467
Query: 458 DFNVDGVPDLA-VGAPSVGSEQLTYKGAVYVYFGSKQG-----GMSSSPNITISCQDIYC 511
D + DG +L +GAP EQ G V++Y + G + P +
Sbjct: 468 DVDQDGETELLLIGAPLFYGEQRG--GRVFIYQRRQLGFEEVSELQGDPGYPLG------ 519
Query: 512 NLGWTLLA-ADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYS-GPSLSDKEKLNVEAANW 569
G + A D+NGD D+ +G+P +++G V F LS + +E
Sbjct: 520 RFGEAITALTDINGDGLVDVAVGAPL-----EEQGAVYIFNGRHGGLSPQPSQRIEGTQV 574
Query: 570 TVRGEEDFSWFGYSLHGV 587
WFG S+HGV
Sbjct: 575 L----SGIQWFGRSIHGV 588
Score = 35.4 bits (80), Expect = 0.22
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 45/193 (23%)
Query: 579 WFGYSLHGVTVDNRTLLLV-GSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWF- 636
+ GY++ + +T LL G+P +++ +G +L ++ P G W
Sbjct: 403 YLGYTVTWLPSRQKTSLLASGAPRYQH---MGRVLLFQE------------PQGGGHWSQ 447
Query: 637 --TISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRM 694
TI G + G L V +G ++LL+GAP + + GG +
Sbjct: 448 VQTIHGTQIGSYFGGELCGVDVDQDGET-ELLLIGAPLFYGEQR----------GGRVFI 496
Query: 695 YALTSDAQPLLLSTFSGDRRF--SRFG-GVLHLSDLDDDGLDEIIMAAPLRIADVTSGLI 751
Y + S GD + RFG + L+D++ DGL ++ + APL
Sbjct: 497 YQRRQLGFEEV-SELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLE--------- 546
Query: 752 GGEDGRVYVYNGK 764
E G VY++NG+
Sbjct: 547 --EQGAVYIFNGR 557
>gi|4504747 integrin alpha 3 isoform a precursor [Homo sapiens]
Length = 1051
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 408 PGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDL 467
P H H+G V+L+ G D ++LEG Q FGSA+A+ D N DG DL
Sbjct: 273 PRHRHMGAVFLLSQEAGG--------DLRRRQVLEGSQVGAYFGSAIALADLNNDGWQDL 324
Query: 468 AVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSE 527
VGAP + GA+YV+ + P++ + D+N D
Sbjct: 325 LVGAPYYFERKEEVGGAIYVFMNQAGTSFPAHPSLLLHGPSGSAFGLSVASIGDINQDGF 384
Query: 528 PDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG- 586
D+ +G+PF +G+ + S + + + G + FGYSL G
Sbjct: 385 QDIAVGAPF-------EGLGKVYIYHSSSKGLLRQPQQVIHGEKLGLPGLATFGYSLSGQ 437
Query: 587 VTVDNRTL--LLVGS 599
+ VD LLVGS
Sbjct: 438 MDVDENFYPDLLVGS 452
Score = 62.0 bits (149), Expect = 2e-09
Identities = 82/293 (27%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 258 STNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVD 317
++N +L + M + GTS +N ++ G N S M + S + D
Sbjct: 186 NSNTDYLETGMCQLGTSG-GFTQNTVYFGAPGAYNWKGNSYMIQRKEWDLSEYSYKDPED 244
Query: 318 RNINYTERGVFFSVNSWT--PDSMSFIYKA-LERNIRTMFI----GGSQLSQKHV--SSP 368
+ Y G V S+ P +++ + A R++ +F+ G L ++ V S
Sbjct: 245 QGNLYI--GYTMQVGSFILHPKNITIVTGAPRHRHMGAVFLLSQEAGGDLRRRQVLEGSQ 302
Query: 369 LASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPP 428
+ +YF G A+ ADLN DG DL+VGAP Y +G ++ N G
Sbjct: 303 VGAYF--------GSAIALADLNNDGWQDLLVGAPYYFERKE-EVGGAIYVFMNQAG--- 350
Query: 429 VDLDLDKEAHRILEGFQPSG-RFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVY 486
AH L PSG FG ++A + D N DG D+AVGAP G G VY
Sbjct: 351 ----TSFPAHPSLLLHGPSGSAFGLSVASIGDINQDGFQDIAVGAPFEG------LGKVY 400
Query: 487 VYFGSKQGGMSSSPNITISCQDI----YCNLGWTLLA-ADVNGDSEPDLVIGS 534
+Y S + G+ P I + + G++L DV+ + PDL++GS
Sbjct: 401 IYHSSSK-GLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLVGS 452
>gi|6006011 integrin alpha 3 isoform b precursor [Homo sapiens]
Length = 1066
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 408 PGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDL 467
P H H+G V+L+ G D ++LEG Q FGSA+A+ D N DG DL
Sbjct: 273 PRHRHMGAVFLLSQEAGG--------DLRRRQVLEGSQVGAYFGSAIALADLNNDGWQDL 324
Query: 468 AVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSE 527
VGAP + GA+YV+ + P++ + D+N D
Sbjct: 325 LVGAPYYFERKEEVGGAIYVFMNQAGTSFPAHPSLLLHGPSGSAFGLSVASIGDINQDGF 384
Query: 528 PDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG- 586
D+ +G+PF +G+ + S + + + G + FGYSL G
Sbjct: 385 QDIAVGAPF-------EGLGKVYIYHSSSKGLLRQPQQVIHGEKLGLPGLATFGYSLSGQ 437
Query: 587 VTVDNRTL--LLVGS 599
+ VD LLVGS
Sbjct: 438 MDVDENFYPDLLVGS 452
Score = 62.0 bits (149), Expect = 2e-09
Identities = 82/293 (27%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 258 STNIYHLTSFMLENGTSDCNLPENPLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVD 317
++N +L + M + GTS +N ++ G N S M + S + D
Sbjct: 186 NSNTDYLETGMCQLGTSG-GFTQNTVYFGAPGAYNWKGNSYMIQRKEWDLSEYSYKDPED 244
Query: 318 RNINYTERGVFFSVNSWT--PDSMSFIYKA-LERNIRTMFI----GGSQLSQKHV--SSP 368
+ Y G V S+ P +++ + A R++ +F+ G L ++ V S
Sbjct: 245 QGNLYI--GYTMQVGSFILHPKNITIVTGAPRHRHMGAVFLLSQEAGGDLRRRQVLEGSQ 302
Query: 369 LASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPP 428
+ +YF G A+ ADLN DG DL+VGAP Y +G ++ N G
Sbjct: 303 VGAYF--------GSAIALADLNNDGWQDLLVGAPYYFERKE-EVGGAIYVFMNQAG--- 350
Query: 429 VDLDLDKEAHRILEGFQPSG-RFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVY 486
AH L PSG FG ++A + D N DG D+AVGAP G G VY
Sbjct: 351 ----TSFPAHPSLLLHGPSGSAFGLSVASIGDINQDGFQDIAVGAPFEG------LGKVY 400
Query: 487 VYFGSKQGGMSSSPNITISCQDI----YCNLGWTLLA-ADVNGDSEPDLVIGS 534
+Y S + G+ P I + + G++L DV+ + PDL++GS
Sbjct: 401 IYHSSSK-GLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLVGS 452
>gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens]
Length = 1012
Score = 61.6 bits (148), Expect = 3e-09
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 326 GVFFSVNSWTPDSMSFIYKALERNIRTM----FIGGSQLSQKH--VSSPLASYFLSFPYA 379
G +V + D + + R RT+ G +S + +A+YF
Sbjct: 217 GYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYF------ 270
Query: 380 RLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHR 439
G+++ + D+N D + D+ +GAP + G G++ + + L D
Sbjct: 271 --GFSVAATDINGDDYADVFIGAPLFMDRG--SDGKLQEVGQVSVSLQRASGDFQTTK-- 324
Query: 440 ILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSS 498
L GF+ RFGSA+A L D + DG D+A+ AP G ++ KG VY+ F + G+++
Sbjct: 325 -LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDK---KGIVYI-FNGRSTGLNA 379
Query: 499 SPNITI----SCQDIYCNLGWTLL-AADVNGDSEPDLVIGS 534
P+ + + + + + G+++ A D++ + PDL++G+
Sbjct: 380 VPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGA 420
Score = 55.1 bits (131), Expect = 3e-07
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 376 FPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDK 435
F + LG+++ D N DG D V G P +R +G VY+ G ++
Sbjct: 211 FDDSYLGYSVAVGDFNGDGIDDFVSGVPRAART----LGMVYIYDGKNM----------- 255
Query: 436 EAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAP---SVGSE-QLTYKGAVYVYFGS 491
+ G Q + FG ++A D N D D+ +GAP GS+ +L G V V
Sbjct: 256 SSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQR 315
Query: 492 KQGGMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAAF 550
G ++ ++ +++ G + D++ D D+ I +P+ GG +KGIV F
Sbjct: 316 ASGDFQTT---KLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPY--GGEDKKGIVYIF 370
Query: 551 YSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVT 588
+ + + W R FGYS+ G T
Sbjct: 371 NGRSTGLNAVPSQILEGQWAARSMPPS--FGYSMKGAT 406
Score = 55.1 bits (131), Expect = 3e-07
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 32/159 (20%)
Query: 619 KSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDD--- 675
++LG VY Y N S + +G++ G S+++ + NG + +GAP + D
Sbjct: 242 RTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDI--NGDDYADVFIGAPLFMDRGS 299
Query: 676 ---VSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDG 731
+ +V ++V+L + + D Q L+ F F+RFG + L DLD DG
Sbjct: 300 DGKLQEVGQVSVSLQRA--------SGDFQTTKLNGFEV---FARFGSAIAPLGDLDQDG 348
Query: 732 LDEIIMAAPLRIADVTSGLIGGED--GRVYVYNGKETTL 768
++I +AAP GGED G VY++NG+ T L
Sbjct: 349 FNDIAIAAP----------YGGEDKKGIVYIFNGRSTGL 377
Score = 48.9 bits (115), Expect = 2e-05
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 437 AHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGM 496
A R + G ++AV DFN DG+ D G P G VY+Y G M
Sbjct: 203 ATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTL----GMVYIYDGKN---M 255
Query: 497 SSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSP 535
SS N T Y G+++ A D+NGD D+ IG+P
Sbjct: 256 SSLYNFTGEQMAAY--FGFSVAATDINGDDYADVFIGAP 292
>gi|223468595 integrin alpha-V isoform 2 [Homo sapiens]
Length = 1002
Score = 61.6 bits (148), Expect = 3e-09
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 326 GVFFSVNSWTPDSMSFIYKALERNIRTM----FIGGSQLSQKH--VSSPLASYFLSFPYA 379
G +V + D + + R RT+ G +S + +A+YF
Sbjct: 207 GYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYF------ 260
Query: 380 RLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHR 439
G+++ + D+N D + D+ +GAP + G G++ + + L D
Sbjct: 261 --GFSVAATDINGDDYADVFIGAPLFMDRG--SDGKLQEVGQVSVSLQRASGDFQTTK-- 314
Query: 440 ILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSS 498
L GF+ RFGSA+A L D + DG D+A+ AP G ++ KG VY+ F + G+++
Sbjct: 315 -LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDK---KGIVYI-FNGRSTGLNA 369
Query: 499 SPNITI----SCQDIYCNLGWTLL-AADVNGDSEPDLVIGS 534
P+ + + + + + G+++ A D++ + PDL++G+
Sbjct: 370 VPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGA 410
Score = 55.1 bits (131), Expect = 3e-07
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 376 FPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDK 435
F + LG+++ D N DG D V G P +R +G VY+ G ++
Sbjct: 201 FDDSYLGYSVAVGDFNGDGIDDFVSGVPRAART----LGMVYIYDGKNM----------- 245
Query: 436 EAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAP---SVGSE-QLTYKGAVYVYFGS 491
+ G Q + FG ++A D N D D+ +GAP GS+ +L G V V
Sbjct: 246 SSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQR 305
Query: 492 KQGGMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAAF 550
G ++ ++ +++ G + D++ D D+ I +P+ GG +KGIV F
Sbjct: 306 ASGDFQTT---KLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPY--GGEDKKGIVYIF 360
Query: 551 YSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVT 588
+ + + W R FGYS+ G T
Sbjct: 361 NGRSTGLNAVPSQILEGQWAARSMPPS--FGYSMKGAT 396
Score = 55.1 bits (131), Expect = 3e-07
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 32/159 (20%)
Query: 619 KSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDD--- 675
++LG VY Y N S + +G++ G S+++ + NG + +GAP + D
Sbjct: 232 RTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDI--NGDDYADVFIGAPLFMDRGS 289
Query: 676 ---VSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDG 731
+ +V ++V+L + + D Q L+ F F+RFG + L DLD DG
Sbjct: 290 DGKLQEVGQVSVSLQRA--------SGDFQTTKLNGFEV---FARFGSAIAPLGDLDQDG 338
Query: 732 LDEIIMAAPLRIADVTSGLIGGED--GRVYVYNGKETTL 768
++I +AAP GGED G VY++NG+ T L
Sbjct: 339 FNDIAIAAP----------YGGEDKKGIVYIFNGRSTGL 367
Score = 48.9 bits (115), Expect = 2e-05
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 437 AHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGM 496
A R + G ++AV DFN DG+ D G P G VY+Y G M
Sbjct: 193 ATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTL----GMVYIYDGKN---M 245
Query: 497 SSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSP 535
SS N T Y G+++ A D+NGD D+ IG+P
Sbjct: 246 SSLYNFTGEQMAAY--FGFSVAATDINGDDYADVFIGAP 282
>gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens]
Length = 1048
Score = 61.6 bits (148), Expect = 3e-09
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 326 GVFFSVNSWTPDSMSFIYKALERNIRTM----FIGGSQLSQKH--VSSPLASYFLSFPYA 379
G +V + D + + R RT+ G +S + +A+YF
Sbjct: 253 GYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYF------ 306
Query: 380 RLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHR 439
G+++ + D+N D + D+ +GAP + G G++ + + L D
Sbjct: 307 --GFSVAATDINGDDYADVFIGAPLFMDRG--SDGKLQEVGQVSVSLQRASGDFQTTK-- 360
Query: 440 ILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSS 498
L GF+ RFGSA+A L D + DG D+A+ AP G ++ KG VY+ F + G+++
Sbjct: 361 -LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDK---KGIVYI-FNGRSTGLNA 415
Query: 499 SPNITI----SCQDIYCNLGWTLL-AADVNGDSEPDLVIGS 534
P+ + + + + + G+++ A D++ + PDL++G+
Sbjct: 416 VPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGA 456
Score = 55.1 bits (131), Expect = 3e-07
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 376 FPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDK 435
F + LG+++ D N DG D V G P +R +G VY+ G ++
Sbjct: 247 FDDSYLGYSVAVGDFNGDGIDDFVSGVPRAART----LGMVYIYDGKNM----------- 291
Query: 436 EAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAP---SVGSE-QLTYKGAVYVYFGS 491
+ G Q + FG ++A D N D D+ +GAP GS+ +L G V V
Sbjct: 292 SSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQR 351
Query: 492 KQGGMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAAF 550
G ++ ++ +++ G + D++ D D+ I +P+ GG +KGIV F
Sbjct: 352 ASGDFQTT---KLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPY--GGEDKKGIVYIF 406
Query: 551 YSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHGVT 588
+ + + W R FGYS+ G T
Sbjct: 407 NGRSTGLNAVPSQILEGQWAARSMPPS--FGYSMKGAT 442
Score = 55.1 bits (131), Expect = 3e-07
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 32/159 (20%)
Query: 619 KSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDD--- 675
++LG VY Y N S + +G++ G S+++ + NG + +GAP + D
Sbjct: 278 RTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDI--NGDDYADVFIGAPLFMDRGS 335
Query: 676 ---VSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDG 731
+ +V ++V+L + + D Q L+ F F+RFG + L DLD DG
Sbjct: 336 DGKLQEVGQVSVSLQRA--------SGDFQTTKLNGFEV---FARFGSAIAPLGDLDQDG 384
Query: 732 LDEIIMAAPLRIADVTSGLIGGED--GRVYVYNGKETTL 768
++I +AAP GGED G VY++NG+ T L
Sbjct: 385 FNDIAIAAP----------YGGEDKKGIVYIFNGRSTGL 413
Score = 48.9 bits (115), Expect = 2e-05
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 437 AHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGM 496
A R + G ++AV DFN DG+ D G P G VY+Y G M
Sbjct: 239 ATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTL----GMVYIYDGKN---M 291
Query: 497 SSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSP 535
SS N T Y G+++ A D+NGD D+ IG+P
Sbjct: 292 SSLYNFTGEQMAAY--FGFSVAATDINGDDYADVFIGAP 328
>gi|119395740 integrin alpha chain, alpha 6 isoform a precursor
[Homo sapiens]
Length = 1091
Score = 59.3 bits (142), Expect = 1e-08
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 29/160 (18%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGY-SRPGHIHIGRVYLIYGNDLG----LPPVDLDLDKE 436
G+ + DLN+DG D+V+GAP Y R G + G VY +Y N G + P+ L+ K+
Sbjct: 317 GYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVG-GAVY-VYMNQQGRWNNVKPIRLNGTKD 374
Query: 437 AHRILEGFQPSGRFGSALA-VLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGG 495
+ FG A+ + D N DG PD+AVGAP G V++Y GS G
Sbjct: 375 S-----------MFGIAVKNIGDINQDGYPDIAVGAP------YDDLGKVFIYHGS-ANG 416
Query: 496 MSSSPNITISCQDIYCNLGWTLLA-ADVNGDSEPDLVIGS 534
+++ P + Y G+++ D++ +S PD+ +GS
Sbjct: 417 INTKPTQVLKGISPY--FGYSIAGNMDLDRNSYPDVAVGS 454
Score = 49.7 bits (117), Expect = 1e-05
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 435 KEAH----RILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFG 490
K AH I +G + FG +AV+D N DG D+ +GAP GAVYVY
Sbjct: 297 KSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMN 356
Query: 491 SKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPF 536
+ + P +D + + D+N D PD+ +G+P+
Sbjct: 357 QQGRWNNVKPIRLNGTKDSMFGIAVKNI-GDINQDGYPDIAVGAPY 401
Score = 32.0 bits (71), Expect = 2.5
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 647 LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLL 706
LG SL SG G + D+++ V+ H G + A L
Sbjct: 258 LGFSLDSGK-------------GIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPE 304
Query: 707 STFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKE 765
F G+ S FG + + DL+ DG +I++ AP G +G G VYVY ++
Sbjct: 305 HIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFD--RDGEVG---GAVYVYMNQQ 358
>gi|119395742 integrin alpha chain, alpha 6 isoform b precursor
[Homo sapiens]
Length = 1073
Score = 59.3 bits (142), Expect = 1e-08
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 29/160 (18%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGY-SRPGHIHIGRVYLIYGNDLG----LPPVDLDLDKE 436
G+ + DLN+DG D+V+GAP Y R G + G VY +Y N G + P+ L+ K+
Sbjct: 317 GYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVG-GAVY-VYMNQQGRWNNVKPIRLNGTKD 374
Query: 437 AHRILEGFQPSGRFGSALA-VLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGG 495
+ FG A+ + D N DG PD+AVGAP G V++Y GS G
Sbjct: 375 S-----------MFGIAVKNIGDINQDGYPDIAVGAP------YDDLGKVFIYHGS-ANG 416
Query: 496 MSSSPNITISCQDIYCNLGWTLLA-ADVNGDSEPDLVIGS 534
+++ P + Y G+++ D++ +S PD+ +GS
Sbjct: 417 INTKPTQVLKGISPY--FGYSIAGNMDLDRNSYPDVAVGS 454
Score = 49.7 bits (117), Expect = 1e-05
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 435 KEAH----RILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFG 490
K AH I +G + FG +AV+D N DG D+ +GAP GAVYVY
Sbjct: 297 KSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMN 356
Query: 491 SKQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPF 536
+ + P +D + + D+N D PD+ +G+P+
Sbjct: 357 QQGRWNNVKPIRLNGTKDSMFGIAVKNI-GDINQDGYPDIAVGAPY 401
Score = 32.0 bits (71), Expect = 2.5
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 647 LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLL 706
LG SL SG G + D+++ V+ H G + A L
Sbjct: 258 LGFSLDSGK-------------GIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPE 304
Query: 707 STFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKE 765
F G+ S FG + + DL+ DG +I++ AP G +G G VYVY ++
Sbjct: 305 HIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFD--RDGEVG---GAVYVYMNQQ 358
>gi|52485941 integrin, alpha 9 precursor [Homo sapiens]
Length = 1035
Score = 58.5 bits (140), Expect = 2e-08
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRIL 441
G ++ + DLN DG DL+VGAP +S VY+ GN L+++
Sbjct: 305 GSSLCAVDLNGDGLSDLLVGAPMFSEIRDEGQVTVYINRGNGA--------LEEQLALTG 356
Query: 442 EGFQPSGRFGSALAVLD-FNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSP 500
+G + FG ++A LD + DG PD+A+GAP ++ + GAVY+Y G GG+
Sbjct: 357 DGAY-NAHFGESIASLDDLDNDGFPDVAIGAP----KEDDFAGAVYIYHGD-AGGIVPQY 410
Query: 501 NITISCQDIYCNL---GWTLLAA-DVNGDSEPDLVIGS 534
++ +S Q I L G ++ D++G+ PD+ +G+
Sbjct: 411 SMKLSGQKINPVLRMFGQSISGGIDMDGNGYPDVTVGA 448
Score = 57.8 bits (138), Expect = 4e-08
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 378 YARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEA 437
Y LG+A+T+ + D+V GAP G ++I R D+ +
Sbjct: 244 YTYLGYAVTAGHFSHPSTIDVVGGAPQDKGIGKVYIFRA-----------------DRRS 286
Query: 438 HRILEGFQPSGR-----FGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSK 492
+++ FQ SG+ FGS+L +D N DG+ DL VGAP ++ +G V VY
Sbjct: 287 GTLIKIFQASGKKMGSYFGSSLCAVDLNGDGLSDLLVGAPMF--SEIRDEGQVTVYINRG 344
Query: 493 QGGMSSSPNITISCQDIY-CNLGWTLLAA-DVNGDSEPDLVIGSP 535
G + + ++ Y + G ++ + D++ D PD+ IG+P
Sbjct: 345 NGALEE--QLALTGDGAYNAHFGESIASLDDLDNDGFPDVAIGAP 387
Score = 43.1 bits (100), Expect = 0.001
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 617 EKKSLGRVYGYFPPNGQSW-----FTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAP 671
+ K +G+VY F + +S F SG K G+SL + V +NG LLVGAP
Sbjct: 270 QDKGIGKVY-IFRADRRSGTLIKIFQASGKKMGSYFGSSLCA--VDLNGDGLSDLLVGAP 326
Query: 672 TYDDVSKVAFLTVTLHQGGAT--RMYALTSDAQPLLLSTFSGDRRFSRFG-GVLHLSDLD 728
+ ++ +TV +++G ALT D + FG + L DLD
Sbjct: 327 MFSEIRDEGQVTVYINRGNGALEEQLALTGDG-----------AYNAHFGESIASLDDLD 375
Query: 729 DDGLDEIIMAAPLRIADVTSGLIGGED---GRVYVYNG 763
+DG ++ + AP ED G VY+Y+G
Sbjct: 376 NDGFPDVAIGAP------------KEDDFAGAVYIYHG 401
Score = 35.0 bits (79), Expect = 0.29
Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 41/238 (17%)
Query: 510 YCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANW 569
Y LG+ + A + S D+V G+P G GK A SG + +
Sbjct: 244 YTYLGYAVTAGHFSHPSTIDVVGGAPQDKGIGKVYIFRADRRSGTLIK----------IF 293
Query: 570 TVRGEEDFSWFGYSLHGVTV--DNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGY 627
G++ S+FG SL V + D + LLVG+P + IRDE G+V Y
Sbjct: 294 QASGKKMGSYFGSSLCAVDLNGDGLSDLLVGAPMFS---------EIRDE----GQVTVY 340
Query: 628 F-PPNG--QSWFTISGDKAM-GKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLT 683
NG + ++GD A G S++S L N V +GAP DD + ++
Sbjct: 341 INRGNGALEEQLALTGDGAYNAHFGESIASLDDLDNDGFPDV-AIGAPKEDDFAGAVYI- 398
Query: 684 VTLHQGGATRMYALTSDAQPL--LLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAA 739
GG Y++ Q + +L F S GG+ D+D +G ++ + A
Sbjct: 399 YHGDAGGIVPQYSMKLSGQKINPVLRMFGQ----SISGGI----DMDGNGYPDVTVGA 448
Score = 33.1 bits (74), Expect = 1.1
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 647 LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLL 706
LG ++++GH T+ V GAP + KV G +++
Sbjct: 247 LGYAVTAGHFSHPSTIDVV--GGAPQDKGIGKVYIFRADRRSGTLIKIFQA--------- 295
Query: 707 STFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPL 741
SG + S FG L DL+ DGL ++++ AP+
Sbjct: 296 ---SGKKMGSYFGSSLCAVDLNGDGLSDLLVGAPM 327
>gi|62548866 integrin, alpha D precursor [Homo sapiens]
Length = 1161
Score = 56.6 bits (135), Expect = 9e-08
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 27/164 (16%)
Query: 382 GWAMTSADLNQDGHGDLV-VGAPGY---SRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEA 437
G ++ S D++ DG DL+ +GAP Y +R G + + LP + +A
Sbjct: 458 GASLCSVDVDSDGSTDLILIGAPHYYEQTRGGQVSV----------CPLPRGRVQWQCDA 507
Query: 438 HRILEGFQ--PSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQG 494
+L G Q P GRFG+AL VL D N D + D+A+GAP + +GAVY++ G+ +
Sbjct: 508 --VLRGEQGHPWGRFGAALTVLGDVNEDKLIDVAIGAPG----EQENRGAVYLFHGASES 561
Query: 495 GMSSSPNITISCQDIYCNLGWTLLA----ADVNGDSEPDLVIGS 534
G+S S + I+ + L + A D+ D DL +G+
Sbjct: 562 GISPSHSQRIASSQLSPRLQYFGQALSGGQDLTQDGLMDLAVGA 605
>gi|116295258 integrin alpha 2 precursor [Homo sapiens]
Length = 1181
Score = 55.1 bits (131), Expect = 3e-07
Identities = 66/193 (34%), Positives = 86/193 (44%), Gaps = 40/193 (20%)
Query: 356 GGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGD-LVVGAPGYSRPGHIHIG 414
G + Q H + SYF G + S D+++D D L+VGAP Y G
Sbjct: 474 GNITVIQAHRGDQIGSYF--------GSVLCSVDVDKDTITDVLLVGAPMYMSDLKKEEG 525
Query: 415 RVYL--IYGNDLGLPPVDLDLDKEAHRILEGFQPSG----RFGSALAVL-DFNVDGVPDL 467
RVYL I LG H+ LEG P G RFGSA+A L D N+DG D+
Sbjct: 526 RVYLFTIKEGILG-----------QHQFLEG--PEGIENTRFGSAIAALSDINMDGFNDV 572
Query: 468 AVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCN-----LGWTLLA-AD 521
VG+P GAVY+Y G QG + + + I D G +L D
Sbjct: 573 IVGSPLENQN----SGAVYIYNG-HQGTIRTKYSQKILGSDGAFRSHLQYFGRSLDGYGD 627
Query: 522 VNGDSEPDLVIGS 534
+NGDS D+ IG+
Sbjct: 628 LNGDSITDVSIGA 640
Score = 45.4 bits (106), Expect = 2e-04
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 31/153 (20%)
Query: 690 GATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGL-DEIIMAAPLRIADVTS 748
G +Y++ + ++ GD+ S FG VL D+D D + D +++ AP+ ++D+
Sbjct: 463 GQIVLYSVNENGNITVIQAHRGDQIGSYFGSVLCSVDVDKDTITDVLLVGAPMYMSDLKK 522
Query: 749 GLIGGEDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEA--SSRFGS---S 803
E+GRVY++ KE LG L PE ++RFGS +
Sbjct: 523 -----EEGRVYLFTIKEGILGQ-----------------HQFLEGPEGIENTRFGSAIAA 560
Query: 804 LITVRSKAKNQVVIAAGRSSLGARLSGALHVYS 836
L + N V++ S L + SGA+++Y+
Sbjct: 561 LSDINMDGFNDVIVG---SPLENQNSGAVYIYN 590
Score = 43.1 bits (100), Expect = 0.001
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 37/195 (18%)
Query: 578 SWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFT 637
S+ GYS+ ++ T + G+P ++ +L+ +E ++ + +
Sbjct: 435 SYLGYSVAAISTGESTHFVAGAPRANYTGQI--VLYSVNENGNITVIQAH---------- 482
Query: 638 ISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTY-DDVSKVAFLTVTLHQGGATRMYA 696
GD+ G+ L S V + T+ VLLVGAP Y D+ K + G ++
Sbjct: 483 -RGDQIGSYFGSVLCSVDVDKD-TITDVLLVGAPMYMSDLKK---------EEGRVYLFT 531
Query: 697 LTSD--AQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDGLDEIIMAAPLRIADVTSGLIGG 753
+ Q L G +RFG + LSD++ DG +++I+ +PL
Sbjct: 532 IKEGILGQHQFLEGPEGIEN-TRFGSAIAALSDINMDGFNDVIVGSPLE---------NQ 581
Query: 754 EDGRVYVYNGKETTL 768
G VY+YNG + T+
Sbjct: 582 NSGAVYIYNGHQGTI 596
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 381 LGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRI 440
LG+++ + + H V GAP + + G++ L N+ G V +AHR
Sbjct: 437 LGYSVAAISTGESTH--FVAGAPRAN-----YTGQIVLYSVNENGNITVI-----QAHR- 483
Query: 441 LEGFQPSGRFGSALAVLDFNVDGVPD-LAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSS 499
G Q FGS L +D + D + D L VGAP S+ +G VY+ F K+G +
Sbjct: 484 --GDQIGSYFGSVLCSVDVDKDTITDVLLVGAPMYMSDLKKEEGRVYL-FTIKEGILGQH 540
Query: 500 PNITISCQDIYCNLGWTLLA-ADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSD 558
+ G + A +D+N D D+++GSP Q Y+G +
Sbjct: 541 QFLEGPEGIENTRFGSAIAALSDINMDGFNDVIVGSPLE----NQNSGAVYIYNGHQGTI 596
Query: 559 KEKLNVEAANWTVRGEEDFSWFGYSLHG 586
+ K + + +FG SL G
Sbjct: 597 RTKYSQKILGSDGAFRSHLQYFGRSLDG 624
Score = 32.0 bits (71), Expect = 2.5
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 572 RGEEDFSWFGYSLHGVTVDNRTL---LLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYF 628
RG++ S+FG L V VD T+ LLVG+P +++ D KK GRVY +
Sbjct: 483 RGDQIGSYFGSVLCSVDVDKDTITDVLLVGAP-----------MYMSDLKKEEGRVYLFT 531
Query: 629 PPN---GQSWFTISGDKAM--GKLGTSLSS-GHVLMNGTLKQVLLVGAPTYDDVSKVAFL 682
GQ F + G + + + G+++++ + M+G ++VG+P + S ++
Sbjct: 532 IKEGILGQHQF-LEGPEGIENTRFGSAIAALSDINMDGF--NDVIVGSPLENQNSGAVYI 588
Query: 683 TVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDGLDEIIMAA 739
HQG Y +Q +L S + FG L DL+ D + ++ + A
Sbjct: 589 -YNGHQGTIRTKY-----SQKILGSDGAFRSHLQYFGRSLDGYGDLNGDSITDVSIGA 640
>gi|88501734 integrin alpha M isoform 2 precursor [Homo sapiens]
Length = 1152
Score = 54.7 bits (130), Expect = 4e-07
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 379 ARLGWAMTSADLNQDGHGDLV-VGAPGY---SRPGHIHIGRVYLIYGNDLGLPPVDLDLD 434
A G ++ S D++ +G DLV +GAP Y +R G + + LP
Sbjct: 455 AYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSV----------CPLPRGRARWQ 504
Query: 435 KEAHRILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQ 493
+A E QP GRFG+AL VL D N D + D+A+GAP G E +GAVY++ G+
Sbjct: 505 CDAVLYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAP--GEED--NRGAVYLFHGTSG 560
Query: 494 GGMSSSPNITISCQDIYCNL---GWTLLAA-DVNGDSEPDLVIGS 534
G+S S + I+ + L G +L D+ D DL +G+
Sbjct: 561 SGISPSHSQRIAGSKLSPRLQYFGQSLSGGQDLTMDGLVDLTVGA 605
Score = 45.1 bits (105), Expect = 3e-04
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 63/258 (24%)
Query: 379 ARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAH 438
A LG+A +A + ++ LV+GAP Y HIG V + N G+ E++
Sbjct: 402 AYLGYA--AAIILRNRVQSLVLGAPRYQ-----HIGLVAMFRQNT-GM--------WESN 445
Query: 439 RILEGFQPSGRFGSALAVLDFNVDGVPDLA-VGAPSVGSEQLTYKGAVYVYFGSKQGGMS 497
++G Q FG++L +D + +G DL +GAP + Y ++ G +S
Sbjct: 446 ANVKGTQIGAYFGASLCSVDVDSNGSTDLVLIGAP-------------HYYEQTRGGQVS 492
Query: 498 SSP----NITISCQDI-YCNLG--WTLLAA------DVNGDSEPDLVIGSPFAPGGGKQK 544
P C + Y G W A DVNGD D+ IG APG +
Sbjct: 493 VCPLPRGRARWQCDAVLYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIG---APGEEDNR 549
Query: 545 GIVAAFY--SGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG---VTVDNRTLLLVGS 599
G V F+ SG +S + + + R +FG SL G +T+D L VG+
Sbjct: 550 GAVYLFHGTSGSGISPSHSQRIAGSKLSPR----LQYFGQSLSGGQDLTMDGLVDLTVGA 605
Query: 600 PTWKNASRLGHLLHIRDE 617
GH+L +R +
Sbjct: 606 Q--------GHVLLLRSQ 615
>gi|88758615 integrin alpha 2b preproprotein [Homo sapiens]
Length = 1039
Score = 54.3 bits (129), Expect = 5e-07
Identities = 70/248 (28%), Positives = 103/248 (41%), Gaps = 35/248 (14%)
Query: 364 HVSSPLASYFLSFP-YARLGWAMTSADLNQDGH---GDLVVGAPGYSRPGHIHIGRVYLI 419
HVSS S+ S P Y W + A DG + VVGAP +S
Sbjct: 246 HVSSQSLSFDSSNPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWT----------- 294
Query: 420 YGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAP----SVG 475
LG + + HR L G Q + FG ++AV D N DG DL VGAP S
Sbjct: 295 ----LGAVEILDSYYQRLHR-LRGEQMASYFGHSVAVTDVNGDGRHDLLVGAPLYMESRA 349
Query: 476 SEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGS 534
+L G VY++ + +P++ ++ +Y G + D++ D D+ + +
Sbjct: 350 DRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIAPLGDLDRDGYNDIAVAA 409
Query: 535 PFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG-VTVDNRT 593
P+ GG +G V F L E L + S FG+SL G V +D+
Sbjct: 410 PY--GGPSGRGQVLVF-----LGQSEGLRSRPSQVLDSPFPTGSAFGFSLRGAVDIDDNG 462
Query: 594 L--LLVGS 599
L+VG+
Sbjct: 463 YPDLIVGA 470
Score = 42.4 bits (98), Expect = 0.002
Identities = 105/423 (24%), Positives = 163/423 (38%), Gaps = 86/423 (20%)
Query: 387 SADLNQDGHGD--LVVGAPGYSRPGHIHIGRVYLIYGNDLG--LPPVDLDLDKEAHRI-- 440
S D ++D HG +VVGAP P G V+L G P + DL E +
Sbjct: 53 SLDFHKDSHGRVAIVVGAPRTLGPSQEETGGVFLCPWRAEGGQCPSLLFDLRDETRNVGS 112
Query: 441 --LEGFQPSGRFGSALAVLD-----------FNVDGVPDLAVGAPSVGSEQLTY-KGAVY 486
L+ F+ G+++ +NV + A P VGS L +
Sbjct: 113 QTLQTFKARQGLGASVVSWSDVIVACAPWQHWNVLEKTEEAEKTP-VGSCFLAQPESGRR 171
Query: 487 VYFGSKQGGMSSSPNIT--ISCQDIYCNLGWTLLAADVNGDSEPDLVIGSPFAPGGGKQK 544
+ +G S + S YC G++ + +LV+G APGG
Sbjct: 172 AEYSPCRGNTLSRIYVENDFSWDKRYCEAGFSSVVTQAG-----ELVLG---APGGYYFL 223
Query: 545 GIVAAFYSGPSLSDKEK------LNVEAANWTVRGEEDFS-WFGYSLHGVTVD---NRTL 594
G++A S ++ ++ ++ E F ++GYS+ D N T
Sbjct: 224 GLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGEFDGDLNTTE 283
Query: 595 LLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSG 654
+VG+PTW +L Y+ Q + G++ G S++
Sbjct: 284 YVVGAPTWSWTLGAVEILD------------SYY----QRLHRLRGEQMASYFGHSVAVT 327
Query: 655 HVLMNGTLKQVLLVGAPTYDD------VSKVAFLTVTLHQGGATRMYALTSDAQPLLLST 708
V NG + LLVGAP Y + +++V + + L G + A P LL T
Sbjct: 328 DV--NGDGRHDLLVGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGA------PSLLLT 379
Query: 709 FSGDRRFSRFGGVLH-LSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGR--VYVYNGKE 765
G + + RFG + L DLD DG ++I +AAP GG GR V V+ G+
Sbjct: 380 --GTQLYGRFGSAIAPLGDLDRDGYNDIAVAAP----------YGGPSGRGQVLVFLGQS 427
Query: 766 TTL 768
L
Sbjct: 428 EGL 430
>gi|38569398 integrin, alpha 10 precursor [Homo sapiens]
Length = 1167
Score = 53.5 bits (127), Expect = 8e-07
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 356 GGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGD-LVVGAPGYSRPGHIHIG 414
G +++Q + SYF G + D ++DG D L+V AP + P + G
Sbjct: 469 GAVRVAQSLQGEQIGSYF--------GSELCPLDTDRDGTTDVLLVAAPMFLGPQNKETG 520
Query: 415 RVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVL-DFNVDGVPDLAVGAPS 473
RVY+ L + L E + RFG A+ L D N DG D+AVGAP
Sbjct: 521 RVYVYLVGQQSLLTLQGTLQPEPPQ-------DARFGFAMGALPDLNQDGFADVAVGAPL 573
Query: 474 VGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAA----DVNGDSEPD 529
Q GA+Y+Y G+ Q G+ P I+ + L + + D++GD D
Sbjct: 574 EDGHQ----GALYLYHGT-QSGVRPHPAQRIAAASMPHALSYFGRSVDGRLDLDGDDLVD 628
Query: 530 LVIGS 534
+ +G+
Sbjct: 629 VAVGA 633
Score = 38.9 bits (89), Expect = 0.020
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 441 LEGFQPSGRFGSALAVLDFNVDGVPD-LAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSS 499
L+G Q FGS L LD + DG D L V AP Q G VYVY +Q ++
Sbjct: 477 LQGEQIGSYFGSELCPLDTDRDGTTDVLLVAAPMFLGPQNKETGRVYVYLVGQQSLLTLQ 536
Query: 500 PNITISC-QDIYCNLGWTLLAA-DVNGDSEPDLVIGSPFAPG 539
+ QD G+ + A D+N D D+ +G+P G
Sbjct: 537 GTLQPEPPQD--ARFGFAMGALPDLNQDGFADVAVGAPLEDG 576
Score = 37.7 bits (86), Expect = 0.045
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 647 LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLL 706
LG S+SS +L+ G +++ L GAP + KV + L + GA R+ AQ L
Sbjct: 431 LGYSVSS--MLLRGG-RRLFLSGAPRFRHRGKV--IAFQLKKDGAVRV------AQSL-- 477
Query: 707 STFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKET 766
G++ S FG L D D DG ++++ A A + G E GRVYVY +
Sbjct: 478 ---QGEQIGSYFGSELCPLDTDRDGTTDVLLVA----APMFLGPQNKETGRVYVYLVGQQ 530
Query: 767 TLGDMTGKCKSWITPCPEEKAQY 789
+L + G + P P + A++
Sbjct: 531 SLLTLQGT----LQPEPPQDARF 549
Score = 37.0 bits (84), Expect = 0.076
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 44/229 (19%)
Query: 578 SWFGYSLHGVTV-DNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWF 636
++ GYS+ + + R L L G+P +++ G ++ + +K RV QS
Sbjct: 429 AYLGYSVSSMLLRGGRRLFLSGAPRFRHR---GKVIAFQLKKDGAVRV-------AQS-- 476
Query: 637 TISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYA 696
+ G++ G+ L +GT VLLV AP + V ++ G +
Sbjct: 477 -LQGEQIGSYFGSELCPLDTDRDGTT-DVLLVAAPMFLGPQNKETGRVYVYLVGQQSLLT 534
Query: 697 LTSDAQPLLLSTFSGDRRFSRFGGVLH-LSDLDDDGLDEIIMAAPLRIADVTSGLIGGED 755
L QP + +RFG + L DL+ DG ++ + APL G
Sbjct: 535 LQGTLQP-------EPPQDARFGFAMGALPDLNQDGFADVAVGAPLE---------DGHQ 578
Query: 756 GRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSL 804
G +Y+Y+G + S + P P ++ + P A S FG S+
Sbjct: 579 GALYLYHGTQ-----------SGVRPHPAQRIAAASM-PHALSYFGRSV 615
>gi|224831239 integrin alpha M isoform 1 precursor [Homo sapiens]
Length = 1153
Score = 52.4 bits (124), Expect = 2e-06
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 26/167 (15%)
Query: 379 ARLGWAMTSADLNQDGHGDLV-VGAPGY---SRPGHIHIGRVYLIYGNDLGLPPVDLDLD 434
A G ++ S D++ +G DLV +GAP Y +R G + + + P
Sbjct: 455 AYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSVCPL-----------PRGQRAR 503
Query: 435 KEAHRILEGFQ--PSGRFGSALAVL-DFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGS 491
+ +L G Q P GRFG+AL VL D N D + D+A+GAP G E +GAVY++ G+
Sbjct: 504 WQCDAVLYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAP--GEED--NRGAVYLFHGT 559
Query: 492 KQGGMSSSPNITISCQDIYCNL---GWTLLAA-DVNGDSEPDLVIGS 534
G+S S + I+ + L G +L D+ D DL +G+
Sbjct: 560 SGSGISPSHSQRIAGSKLSPRLQYFGQSLSGGQDLTMDGLVDLTVGA 606
Score = 45.1 bits (105), Expect = 3e-04
Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 66/260 (25%)
Query: 379 ARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAH 438
A LG+A +A + ++ LV+GAP Y HIG V + N G+ E++
Sbjct: 402 AYLGYA--AAIILRNRVQSLVLGAPRYQ-----HIGLVAMFRQNT-GM--------WESN 445
Query: 439 RILEGFQPSGRFGSALAVLDFNVDGVPDLA-VGAPSVGSEQLTYKGAVYVYFGSKQGGMS 497
++G Q FG++L +D + +G DL +GAP Y+ +GG
Sbjct: 446 ANVKGTQIGAYFGASLCSVDVDSNGSTDLVLIGAPH--------------YYEQTRGGQV 491
Query: 498 S------SPNITISCQDI-YCNLG--WTLLAA------DVNGDSEPDLVIGSPFAPGGGK 542
S C + Y G W A DVNGD D+ IG APG
Sbjct: 492 SVCPLPRGQRARWQCDAVLYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIG---APGEED 548
Query: 543 QKGIVAAFY--SGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG---VTVDNRTLLLV 597
+G V F+ SG +S + + + R +FG SL G +T+D L V
Sbjct: 549 NRGAVYLFHGTSGSGISPSHSQRIAGSKLSPR----LQYFGQSLSGGQDLTMDGLVDLTV 604
Query: 598 GSPTWKNASRLGHLLHIRDE 617
G+ GH+L +R +
Sbjct: 605 GAQ--------GHVLLLRSQ 616
>gi|67191027 integrin alpha 4 precursor [Homo sapiens]
Length = 1032
Score = 52.0 bits (123), Expect = 2e-06
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 381 LGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRI 440
LG+++ + ++V GAP H IG+ Y+ + +L++ E
Sbjct: 251 LGYSVGAGHFRSQHTTEVVGGAPQ-----HEQIGKAYIF-----SIDEKELNILHE---- 296
Query: 441 LEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSP 500
++G + FG+++ +D N DG DL VGAP + +G V+VY S G + ++
Sbjct: 297 MKGKKLGSYFGASVCAVDLNADGFSDLLVGAPM--QSTIREEGRVFVYINSGSGAVMNAM 354
Query: 501 NITISCQDIY-CNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSD 558
+ D Y G +++ D++ D D+ IG+P ++ + A Y +D
Sbjct: 355 ETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAP------QEDDLQGAIYIYNGRAD 408
Query: 559 KEKLNVEAANWTVRGEEDFSWFGYSLHG-VTVDN 591
++ + S FG S+ G + DN
Sbjct: 409 GISSTFSQRIEGLQISKSLSMFGQSISGQIDADN 442
Score = 38.5 bits (88), Expect = 0.026
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 48/200 (24%)
Query: 647 LGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPL-L 705
LG S+ +GH T + V GAP ++ + K Y + D + L +
Sbjct: 251 LGYSVGAGHFRSQHTTEVV--GGAPQHEQIGKA---------------YIFSIDEKELNI 293
Query: 706 LSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVY--NG 763
L G + S FG + DL+ DG ++++ AP++ E+GRV+VY +G
Sbjct: 294 LHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTI-------REEGRVFVYINSG 346
Query: 764 KETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLIT---VRSKAKNQVVIAAG 820
+ M ++ S + ++RFG S++ + + V I A
Sbjct: 347 SGAVMNAMETN---------------LVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAP 391
Query: 821 RSSLGARLSGALHVYSLGSD 840
+ L GA+++Y+ +D
Sbjct: 392 QED---DLQGAIYIYNGRAD 408
>gi|31657142 integrin, alpha 1 precursor [Homo sapiens]
Length = 1179
Score = 51.2 bits (121), Expect = 4e-06
Identities = 76/287 (26%), Positives = 114/287 (39%), Gaps = 70/287 (24%)
Query: 329 FSVNSWTPDSMSFIYKALERN--------IRTMFIGGSQLSQKHVSSPLASYFLSFPYAR 380
++VNS T S +Y A + I M G ++ Q + SYF
Sbjct: 438 YTVNSATASSGDVLYIAGQPRYNHTGQVIIYRMEDGNIKILQTLSGEQIGSYF------- 490
Query: 381 LGWAMTSADLNQDGHGD-LVVGAPGYSRPGHIHIGRVYLIYGND------LGLPPVDLDL 433
G +T+ D+++D + D L+VGAP Y G+VY+ N + L P+
Sbjct: 491 -GSILTTTDIDKDSNTDILLVGAPMYMGTEKEEQGKVYVYALNQTRFEYQMSLEPIKQTC 549
Query: 434 -DKEAHRIL---EGFQPSG-RFGSALA-VLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYV 487
H +P G RFG+A+A V D N+DG D+ +GAP + + GAVY+
Sbjct: 550 CSSRQHNSCTTENKNEPCGARFGTAIAAVKDLNLDGFNDIVIGAPL----EDDHGGAVYI 605
Query: 488 YFGS------------KQGGMSSSPNITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSP 535
Y GS GG + Q I+ + D+NGD D+ IG
Sbjct: 606 YHGSGKTIRKEYAQRIPSGG--DGKTLKFFGQSIHGEM-------DLNGDGLTDVTIGG- 655
Query: 536 FAPGGGKQKGIVAAFYSGPSLSDK-------EKLNVEAANWTVRGEE 575
G A F+S K K+N++ N + G+E
Sbjct: 656 --------LGGAALFWSRDVAVVKVTMNFEPNKVNIQKKNCHMEGKE 694
Score = 40.4 bits (93), Expect = 0.007
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 563 NVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLV-GSPTWKNASRLGHLLHIRDEKKSL 621
NVE+ T + E S+ GY+++ T + +L + G P + + ++
Sbjct: 422 NVES---TKKNEPLASYLGYTVNSATASSGDVLYIAGQPRYNHTGQV------------- 465
Query: 622 GRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAF 681
+Y N + T+SG++ G+ L++ + + +LLVGAP Y K
Sbjct: 466 -IIYRMEDGNIKILQTLSGEQIGSYFGSILTTTDIDKDSNT-DILLVGAPMYMGTEKEEQ 523
Query: 682 LTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFS------------RFG-GVLHLSDLD 728
V ++ TR + +P+ + S + S RFG + + DL+
Sbjct: 524 GKVYVYALNQTR-FEYQMSLEPIKQTCCSSRQHNSCTTENKNEPCGARFGTAIAAVKDLN 582
Query: 729 DDGLDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTL 768
DG ++I++ APL G VY+Y+G T+
Sbjct: 583 LDGFNDIVIGAPLE---------DDHGGAVYIYHGSGKTI 613
>gi|52485853 integrin, alpha 11 precursor [Homo sapiens]
Length = 1188
Score = 48.1 bits (113), Expect = 3e-05
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 30/224 (13%)
Query: 371 SYFLSFPY------ARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDL 424
SY FP A LG+ +TS ++ G V GAP ++ H G+V L ++
Sbjct: 409 SYLKEFPEELKNHGAYLGYTVTSVVSSRQGRV-YVAGAPRFN-----HTGKVILFTMHN- 461
Query: 425 GLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLDFNVDGVPD-LAVGAPSVGSEQLTYKG 483
+ H+ + G Q FGS + +D + DGV D L VGAP +E +G
Sbjct: 462 -------NRSLTIHQAMRGQQIGSYFGSEITSVDIDGDGVTDVLLVGAPMYFNEG-RERG 513
Query: 484 AVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTLLAA-DVNGDSEPDLVIGSPFAPGGGK 542
VYVY +Q + + S G ++ + D+N DS D+V+G+P
Sbjct: 514 KVYVY-ELRQNLFVYNGTLKDSHSYQNARFGSSIASVRDLNQDSYNDVVVGAPLEDNHAG 572
Query: 543 QKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG 586
I F + K+++ +FG S+HG
Sbjct: 573 AIYIFHGFRGSILKTPKQRITASEL------ATGLQYFGCSIHG 610
Score = 45.1 bits (105), Expect = 3e-04
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 375 SFPYARLGWAMTSA-DLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYG---NDLGLPPVD 430
S+ AR G ++ S DLNQD + D+VVGAP H G +Y+ +G + L P
Sbjct: 536 SYQNARFGSSIASVRDLNQDSYNDVVVGAPLEDN----HAGAIYIFHGFRGSILKTPKQR 591
Query: 431 LDLDKEAHRILEGFQPSGRFGSAL-AVLDFNVDGVPDLAVGA 471
+ A + G Q FG ++ LD N DG+ DLAVGA
Sbjct: 592 IT----ASELATGLQ---YFGCSIHGQLDLNEDGLIDLAVGA 626
Score = 37.4 bits (85), Expect = 0.058
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 41/176 (23%)
Query: 664 QVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVLH 723
+V + GAP ++ KV + T+H + ++ G + S FG +
Sbjct: 439 RVYVAGAPRFNHTGKV--ILFTMHNNRSLTIH-----------QAMRGQQIGSYFGSEIT 485
Query: 724 LSDLDDDGL-DEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWITPC 782
D+D DG+ D +++ AP+ + G E G+VYVY ++ L G K
Sbjct: 486 SVDIDGDGVTDVLLVGAPMYFNE------GRERGKVYVYELRQ-NLFVYNGTLK------ 532
Query: 783 PEEKAQYVLISPEASSRFGSSLITVR---SKAKNQVVIAAGRSSLGARLSGALHVY 835
+ Y ++RFGSS+ +VR + N VV+ A L +GA++++
Sbjct: 533 --DSHSY------QNARFGSSIASVRDLNQDSYNDVVVGA---PLEDNHAGAIYIF 577
>gi|49170034 integrin, alpha 8 [Homo sapiens]
Length = 1063
Score = 47.8 bits (112), Expect = 4e-05
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 26/217 (11%)
Query: 375 SFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLD 434
S+ + LG+++ + + D +LV G P G + G V +I D+
Sbjct: 261 SYDDSYLGYSVAAGEFTGDSQQELVAGIPR----GAQNFGYVSIINSTDMTFI------- 309
Query: 435 KEAHRILEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYK----GAVYVYFG 490
+ G Q + FG + V D N DG+ D+ VGAP + G +Y+Y
Sbjct: 310 ----QNFTGEQMASYFGYTVVVSDVNSDGLDDVLVGAPLFMEREFESNPREVGQIYLYL- 364
Query: 491 SKQGGMSSSPNITISCQDIYCNLGWTLL-AADVNGDSEPDLVIGSPFAPGGGKQKGIVAA 549
+ P I ++ + + G + D+N D D+ IG PFA G Q+G V
Sbjct: 365 QVSSLLFRDPQI-LTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFA--GKDQRGKVLI 421
Query: 550 FYSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG 586
+ + + V W S FG++L G
Sbjct: 422 YNGNKDGLNTKPSQVLQGVWASHAVP--SGFGFTLRG 456
Score = 42.0 bits (97), Expect = 0.002
Identities = 70/301 (23%), Positives = 110/301 (36%), Gaps = 51/301 (16%)
Query: 510 YCNLGWTLLAADVNGDSEPDLVIGSP--FAPGGGKQKGIVAAFYSGPSLSD-KEKLNVEA 566
YC G++L + DL++G P F G VA + S D KL E
Sbjct: 199 YCQAGFSL-----DFYKNGDLIVGGPGSFYWQGQVITASVADIIANYSFKDILRKLAGEK 253
Query: 567 ANWTVRGEEDFSWFGYSLHG--VTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRV 624
D S+ GYS+ T D++ L+ G P + A G++ I + +
Sbjct: 254 QTEVAPASYDDSYLGYSVAAGEFTGDSQQELVAGIP--RGAQNFGYVSIINSTDMTFIQN 311
Query: 625 YGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTV 684
+ +G++ G ++ V +G +LVGAP + +
Sbjct: 312 F-------------TGEQMASYFGYTVVVSDVNSDGL--DDVLVGAPLFMERE----FES 352
Query: 685 TLHQGGATRMYALTSDAQPLLLSTFSGDRRFSRFGGVL-HLSDLDDDGLDEIIMAAPLRI 743
+ G +Y S +G F RFG + HL DL+ DG ++I + P
Sbjct: 353 NPREVGQIYLYLQVSSLLFRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAG 412
Query: 744 ADVTSGLIGGEDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSS 803
D + G+V +YNG K + P + Q V S S FG +
Sbjct: 413 KD--------QRGKVLIYNGN-----------KDGLNTKPSQVLQGVWASHAVPSGFGFT 453
Query: 804 L 804
L
Sbjct: 454 L 454
Score = 35.4 bits (80), Expect = 0.22
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 10/155 (6%)
Query: 382 GWAMTSADLNQDGHGDLVVGAPG-YSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRI 440
G+ L+ +GDL+VG PG + G + V I N + ++ +
Sbjct: 198 GYCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASVADIIANYSFKDILRKLAGEKQTEV 257
Query: 441 LEGFQPSGRFGSALAVLDFNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSP 500
G ++A +F D +L G P G++ Y + M+
Sbjct: 258 APASYDDSYLGYSVAAGEFTGDSQQELVAGIPR-GAQNFGYVSII------NSTDMTFIQ 310
Query: 501 NITISCQDIYCNLGWTLLAADVNGDSEPDLVIGSP 535
N T Y G+T++ +DVN D D+++G+P
Sbjct: 311 NFTGEQMASY--FGYTVVVSDVNSDGLDDVLVGAP 343
>gi|148728188 integrin, alpha E precursor [Homo sapiens]
Length = 1179
Score = 45.8 bits (107), Expect = 2e-04
Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 378 YARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIY--GNDLGLPPVDLDLDK 435
Y+ LG+A+ A L++ + GAP Y H G V+ + G + PV
Sbjct: 458 YSYLGYAV--AVLHKTCSLSYIAGAPRYK-----HHGAVFELQKEGREASFLPV------ 504
Query: 436 EAHRILEGFQPSGRFGSALAVLDFNVDGVPD-LAVGAP--SVGSEQLTYKGAVYVYFGSK 492
LEG Q FGS L +D ++DG D L V AP V E+ G VYVY S+
Sbjct: 505 -----LEGEQMGSYFGSELCPVDIDMDGSTDFLLVAAPFYHVHGEE----GRVYVYRLSE 555
Query: 493 QGGMSSSPNITISCQDIYCN--LGWTLLA-ADVNGDSEPDLVIGSP---FAPGGGKQKGI 546
Q G S I +S + N G+ + A D++ D D+ IG+P F G G
Sbjct: 556 QDGSFSLARI-LSGHPGFTNARFGFAMAAMGDLSQDKLTDVAIGAPLEGFGADDGASFGS 614
Query: 547 VAAF---YSGPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG 586
V + + G S S +++ +FG S+ G
Sbjct: 615 VYIYNGHWDGLSASPSQRIRASTV------APGLQYFGMSMAG 651
Score = 37.7 bits (86), Expect = 0.045
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 34/207 (16%)
Query: 562 LNVEAANWTVRGEEDFSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSL 621
LN AA +S+ GY++ + + G+P +K+ G + ++ E
Sbjct: 443 LNQTAAAAADAEAAQYSYLGYAVAVLHKTCSLSYIAGAPRYKHH---GAVFELQKE---- 495
Query: 622 GRVYGYFPPNGQSWFTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAF 681
GR + P + G++ G+ L + M+G+ LLV AP Y
Sbjct: 496 GREASFLP-------VLEGEQMGSYFGSELCPVDIDMDGST-DFLLVAAPFYH------- 540
Query: 682 LTVTLH-QGGATRMYALTS-DAQPLLLSTFSGDRRFS--RFG-GVLHLSDLDDDGLDEII 736
+H + G +Y L+ D L SG F+ RFG + + DL D L ++
Sbjct: 541 ----VHGEEGRVYVYRLSEQDGSFSLARILSGHPGFTNARFGFAMAAMGDLSQDKLTDVA 596
Query: 737 MAAPLRIADVTSGLIGGEDGRVYVYNG 763
+ APL G G VY+YNG
Sbjct: 597 IGAPLEGFGADDG---ASFGSVYIYNG 620
Score = 33.5 bits (75), Expect = 0.84
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 657 LMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLSTFSGDRRFS 716
+++ T + GAP Y H G + +A L G++ S
Sbjct: 467 VLHKTCSLSYIAGAPRYK------------HHGAVFELQKEGREAS--FLPVLEGEQMGS 512
Query: 717 RFGGVLHLSDLDDDG-LDEIIMAAPLRIADVTSGLIGGEDGRVYVYNGKE 765
FG L D+D DG D +++AAP + GE+GRVYVY E
Sbjct: 513 YFGSELCPVDIDMDGSTDFLLVAAPFYH-------VHGEEGRVYVYRLSE 555
>gi|34452173 integrin alpha X precursor [Homo sapiens]
Length = 1163
Score = 45.1 bits (105), Expect = 3e-04
Identities = 72/293 (24%), Positives = 111/293 (37%), Gaps = 72/293 (24%)
Query: 327 VFFSVNSWTPDSMSFIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMT 386
V +V S+T +F+Y N+ FI +SQ++V + +L + W
Sbjct: 366 VLGAVGSFTWSGGAFLYPP---NMSPTFIN---MSQENVD--MRDSYLGYSTELALWK-- 415
Query: 387 SADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQP 446
G LV+GAP Y H G+ + + + G Q
Sbjct: 416 -------GVQSLVLGAPRYQ-----HTGKAVIF---------TQVSRQWRMKAEVTGTQI 454
Query: 447 SGRFGSALAVLDFNVDGVPDLA-VGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITIS 505
FG++L +D + DG DL +GAP Y+ +GG S +
Sbjct: 455 GSYFGASLCSVDVDSDGSTDLVLIGAPH--------------YYEQTRGGQVSVCPLPRG 500
Query: 506 CQDIYCNL--------GWTLLAA------DVNGDSEPDLVIGSPFAPGGGKQKGIVAAFY 551
+ +C+ W A DVNGD D+VIG APG + +G V F+
Sbjct: 501 WRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIG---APGEEENRGAVYLFH 557
Query: 552 S--GPSLSDKEKLNVEAANWTVRGEEDFSWFGYSLHG---VTVDNRTLLLVGS 599
GPS+S + + + R +FG +L G +T D L VG+
Sbjct: 558 GVLGPSISPSHSQRIAGSQLSSR----LQYFGQALSGGQDLTQDGLVDLAVGA 606
Score = 30.4 bits (67), Expect = 7.1
Identities = 58/253 (22%), Positives = 83/253 (32%), Gaps = 65/253 (25%)
Query: 588 TVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSWFTISGDKAMGKL 647
T D L VGS TW + L +PPN F + +
Sbjct: 361 TPDGPVLGAVGSFTWSGGAFL-------------------YPPNMSPTFINMSQENVDMR 401
Query: 648 GTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRMYALTSDAQPLLLS 707
+ L L Q L++GAP Y K T Q RM A
Sbjct: 402 DSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQW---RMKA----------- 447
Query: 708 TFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSG------------------ 749
+G + S FG L D+D DG ++++ + T G
Sbjct: 448 EVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCD 507
Query: 750 -LIGGEDGRVY-VYNGKETTLGDMTG-KCKSWITPCPEEK----AQYVL-------ISPE 795
++ GE G + + T LGD+ G K + P E+ A Y+ ISP
Sbjct: 508 AVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPS 567
Query: 796 ASSRFGSSLITVR 808
S R S ++ R
Sbjct: 568 HSQRIAGSQLSSR 580
>gi|21450863 attractin isoform 2 [Homo sapiens]
Length = 1272
Score = 30.0 bits (66), Expect = 9.3
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 757 RVYVYNGKETTLGDMTGKCK-------SWITPCPEEKAQYVLISPEA 796
++Y+Y GK + G++T + + SW+ P+ K QY ++ A
Sbjct: 403 KIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSA 449
>gi|21450861 attractin isoform 1 [Homo sapiens]
Length = 1429
Score = 30.0 bits (66), Expect = 9.3
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 757 RVYVYNGKETTLGDMTGKCK-------SWITPCPEEKAQYVLISPEA 796
++Y+Y GK + G++T + + SW+ P+ K QY ++ A
Sbjct: 403 KIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSA 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,514,791
Number of Sequences: 37866
Number of extensions: 1578154
Number of successful extensions: 2978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2712
Number of HSP's gapped (non-prelim): 120
length of query: 840
length of database: 18,247,518
effective HSP length: 111
effective length of query: 729
effective length of database: 14,044,392
effective search space: 10238361768
effective search space used: 10238361768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.