Guide to the Human Genome
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Name: GPLD1 Sequence: fasta or formatted (176aa) NCBI GI: 29171719
Description:

glycosylphosphatidylinositol specific phospholipase D1 isoform 2 precursor

Referenced in:

GPI Anchoring
Lipid Metabolism

Other entries for this name:
alt prot [840aa] glycosylphosphatidylinositol specific phospholipase D1 isoform 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         11           2
 C cysteine            2.3          4           1
 D aspartate           4.0          7           1
 E glutamate           5.7         10           1
 F phenylalanine       6.8         12           1
 G glycine             9.1         16           2
 H histidine           7.4         13           1
 I isoleucine          4.0          7           1
 K lysine              2.3          4           1
 L leucine            13.1         23           3
 M methionine          2.3          4           1
 N asparagine          2.8          5           1
 P proline             4.0          7           1
 Q glutamine           2.3          4           1
 R arginine            4.0          7           1
 S serine              8.0         14           1
 T threonine           4.0          7           1
 V valine              5.7         10           2
 W tryptophan          2.3          4           1
 Y tyrosine            4.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycosylphosphatidylinositol specific phospholipase ... 
GPLD1                 0.934   glycosylphosphatidylinositol specific phospholipase ...
IL2RG                 0.009   interleukin 2 receptor, gamma precursor 
RBBP5                 0.009   retinoblastoma binding protein 5 
C10orf28              0.009   growth inhibition and differentiation related prote...
ESRP1                 0.006   RNA binding motif protein 35A isoform 5 
ESRP1                 0.006   RNA binding motif protein 35A isoform 3 
ESRP1                 0.006   RNA binding motif protein 35A isoform 4 
ESRP1                 0.006   RNA binding motif protein 35A isoform 2 
ESRP1                 0.006   RNA binding motif protein 35A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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