CNOT6 24894

Name: CNOT6	Sequence: fasta or formatted (557aa)		NCBI GI: 28872863
Description: CCR4-NOT transcription complex, subunit 6		Referenced in: RNA Polymerase and General Transcription Factors RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 25 2 C cysteine 1.4 8 1 D aspartate 4.1 23 1 E glutamate 6.8 38 2 F phenylalanine 3.9 22 2 G glycine 5.7 32 2 H histidine 3.2 18 2 I isoleucine 4.8 27 2 K lysine 5.9 33 2 L leucine 13.8 77 3 M methionine 2.7 15 2 N asparagine 6.1 34 3 P proline 5.4 30 3 Q glutamine 3.4 19 1 R arginine 4.7 26 2 S serine 8.3 46 2 T threonine 5.4 30 2 V valine 4.7 26 2 W tryptophan 1.3 7 1 Y tyrosine 3.8 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CCR4-NOT transcription complex, subunit 6 CNOT6L 0.787 CCR4-NOT transcription complex, subunit 6-like [Hom... PDE12 0.102 phosphodiesterase 12 ANGEL1 0.074 angel homolog 1 ANGEL2 0.069 LOC90806 protein CCRN4L 0.059 CCR4 carbon catabolite repression 4-like LRRC58 0.046 leucine rich repeat containing 58 RSU1 0.044 ras suppressor protein 1 isoform 1 RSU1 0.044 ras suppressor protein 1 isoform 2 LRRC1 0.044 leucine rich repeat containing 1 LRRC59 0.042 leucine rich repeat containing 59 LRRC8D 0.042 leucine rich repeat containing 8 family, member D [... LRRC8D 0.042 leucine rich repeat containing 8 family, member D [H... SCRIB 0.042 scribble isoform b SCRIB 0.042 scribble isoform a LRRC8A 0.041 leucine rich repeat containing 8 family, member A [H... LRRC8A 0.041 leucine rich repeat containing 8 family, member A [... LRRC8A 0.041 leucine rich repeat containing 8 family, member A [... LRRC40 0.040 leucine rich repeat containing 40 ERBB2IP 0.040 ERBB2 interacting protein isoform 7 ERBB2IP 0.040 ERBB2 interacting protein isoform 2 SHOC2 0.038 soc-2 suppressor of clear homolog LRSAM1 0.038 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.038 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.038 leucine rich repeat and sterile alpha motif containi... PHLPP2 0.036 PH domain and leucine rich repeat protein phosphatas... LRDD 0.036 leucine rich repeat and death domain containing prot... LRDD 0.036 leucine rich repeat and death domain containing prot... LRDD 0.036 leucine rich repeat and death domain containing prot... LRRC7 0.035 leucine rich repeat containing 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.