PDE12 10310

Name: PDE12	Sequence: fasta or formatted (609aa)		NCBI GI: 189027129
Description: phosphodiesterase 12		Referenced in: Interferon RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 57 4 C cysteine 2.6 16 1 D aspartate 4.6 28 1 E glutamate 7.4 45 3 F phenylalanine 3.6 22 2 G glycine 6.1 37 2 H histidine 3.4 21 1 I isoleucine 3.8 23 1 K lysine 5.1 31 2 L leucine 9.7 59 2 M methionine 1.1 7 1 N asparagine 2.6 16 1 P proline 6.2 38 2 Q glutamine 3.3 20 1 R arginine 5.3 32 1 S serine 8.7 53 3 T threonine 4.3 26 2 V valine 7.7 47 2 W tryptophan 1.1 7 1 Y tyrosine 3.9 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphodiesterase 12 CNOT6 0.093 CCR4-NOT transcription complex, subunit 6 CNOT6L 0.092 CCR4-NOT transcription complex, subunit 6-like [Hom... CCRN4L 0.064 CCR4 carbon catabolite repression 4-like ANGEL2 0.063 LOC90806 protein ANGEL1 0.061 angel homolog 1 SMARCA2 0.006 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.006 SWI/SNF-related matrix-associated actin-dependent re... CCDC71 0.006 coiled-coil domain containing 71 CSE1L 0.006 CSE1 chromosome segregation 1-like protein WNK2 0.005 WNK lysine deficient protein kinase 2 SEMA4D 0.005 semaphorin 4D isoform 2 SEMA4D 0.005 semaphorin 4D isoform 1 CNTNAP3 0.005 cell recognition molecule CASPR3 FLJ37512 0.004 PREDICTED: novel protein similar to contactin assoc... ERF 0.004 Ets2 repressor factor CERK 0.004 ceramide kinase PRODH 0.004 proline dehydrogenase 1 LOC389722 0.004 PREDICTED: hypothetical protein LOC389722 isoform 2... LOC389722 0.004 PREDICTED: hypothetical protein LOC389722 isoform 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.