COPS4 26973

Name: COPS4	Sequence: fasta or formatted (406aa)		NCBI GI: 38373690
Description: COP9 signalosome subunit 4		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 46 3 C cysteine 1.2 5 1 D aspartate 4.2 17 3 E glutamate 9.1 37 2 F phenylalanine 2.7 11 1 G glycine 3.2 13 1 H histidine 2.7 11 1 I isoleucine 7.1 29 2 K lysine 5.4 22 1 L leucine 11.6 47 2 M methionine 2.7 11 1 N asparagine 4.2 17 2 P proline 2.2 9 1 Q glutamine 8.1 33 2 R arginine 5.2 21 2 S serine 5.7 23 2 T threonine 4.4 18 2 V valine 4.2 17 1 W tryptophan 0.7 3 1 Y tyrosine 3.9 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COP9 signalosome subunit 4 PSMD12 0.077 proteasome 26S non-ATPase subunit 12 isoform 1 PSMD12 0.077 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... PSMD11 0.018 proteasome 26S non-ATPase subunit 11 SYNE2 0.017 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.017 spectrin repeat containing, nuclear envelope 2 isof... RAI14 0.012 retinoic acid induced 14 isoform d RAI14 0.012 retinoic acid induced 14 isoform c RAI14 0.012 retinoic acid induced 14 isoform b RAI14 0.012 retinoic acid induced 14 isoform a RAI14 0.012 retinoic acid induced 14 isoform a RAI14 0.012 retinoic acid induced 14 isoform a TTC25 0.009 tetratricopeptide repeat domain 25 COPS3 0.009 COP9 constitutive photomorphogenic homolog subunit 3... DCHS2 0.008 dachsous 2 isoform 1 IFIT5 0.008 interferon-induced protein with tetratricopeptide rep... SPTBN4 0.008 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... KIAA1009 0.008 KIAA1009 protein SPTBN4 0.008 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... STX16 0.008 syntaxin 16 isoform a CEP55 0.008 centrosomal protein 55kDa CEP55 0.008 centrosomal protein 55kDa STX16 0.008 syntaxin 16 isoform d STX16 0.008 syntaxin 16 isoform c STX16 0.008 syntaxin 16 isoform b PSMD13 0.008 proteasome 26S non-ATPase subunit 13 isoform 2 [Hom... PSMD13 0.008 proteasome 26S non-ATPase subunit 13 isoform 1 [Hom... TTC3 0.008 tetratricopeptide repeat domain 3 TTC3 0.008 tetratricopeptide repeat domain 3 LRRC40 0.007 leucine rich repeat containing 40 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.