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Search of human proteins with 28178845
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28178845 TG-interacting factor isoform b [Homo sapiens]
(286 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 575 e-164
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 541 e-154
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 539 e-154
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 539 e-154
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 196 2e-50
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 128 5e-30
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 113 2e-25
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 82 4e-16
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 80 2e-15
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 79 5e-15
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 75 7e-14
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 75 7e-14
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 75 7e-14
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 75 7e-14
gi|4505151 Meis homeobox 1 [Homo sapiens] 74 1e-13
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 74 1e-13
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 74 1e-13
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 74 1e-13
gi|7705555 iroquois homeobox 4 [Homo sapiens] 61 1e-09
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 61 1e-09
gi|178057337 mohawk homeobox [Homo sapiens] 60 2e-09
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 59 6e-09
gi|226371735 iroquois homeobox 3 [Homo sapiens] 57 1e-08
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 57 2e-08
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 55 7e-08
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 55 9e-08
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 575 bits (1481), Expect = e-164
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MTCSGKSCALARSSLTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKES 60
MTCSGKSCALARSSLTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKES
Sbjct: 1 MTCSGKSCALARSSLTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKES 60
Query: 61 VQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPN 120
VQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPN
Sbjct: 61 VQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPN 120
Query: 121 QFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSV 180
QFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSV
Sbjct: 121 QFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSV 180
Query: 181 LARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPST 240
LARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPST
Sbjct: 181 LARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPST 240
Query: 241 NTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
NTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 241 NTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 541 bits (1393), Expect = e-154
Identities = 269/275 (97%), Positives = 271/275 (98%)
Query: 12 RSSLTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH 71
R L + +GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH
Sbjct: 127 RRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH 186
Query: 72 RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI 131
RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI
Sbjct: 187 RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI 246
Query: 132 SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT 191
SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT
Sbjct: 247 SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT 306
Query: 192 VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP 251
VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP
Sbjct: 307 VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP 366
Query: 252 PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 367 PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 401
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 539 bits (1389), Expect = e-154
Identities = 267/272 (98%), Positives = 269/272 (98%)
Query: 15 LTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 74
+ +GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
Sbjct: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
Query: 75 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 134
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET
Sbjct: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
Query: 135 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 194
SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA
Sbjct: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
Query: 195 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 254
LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP
Sbjct: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
Query: 255 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 539 bits (1389), Expect = e-154
Identities = 267/272 (98%), Positives = 269/272 (98%)
Query: 15 LTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 74
+ +GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
Sbjct: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
Query: 75 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 134
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET
Sbjct: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
Query: 135 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 194
SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA
Sbjct: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
Query: 195 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 254
LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP
Sbjct: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
Query: 255 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 35 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 94
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 95 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 154
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 155 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 214
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 215 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 274
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 275 AAEMELQAKLTA 286
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 35 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 94
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 95 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 154
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 155 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 214
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 215 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 274
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 275 AAEMELQAKLTA 286
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 35 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 94
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 95 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 154
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 155 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 214
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 215 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 274
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 275 AAEMELQAKLTA 286
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 35 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 94
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 95 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 154
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 155 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 214
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 215 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 274
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 275 AAEMELQAKLTA 286
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 196 bits (499), Expect = 2e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 47 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 106
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
Query: 107 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 166
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
Query: 167 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 226
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
Query: 227 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 281
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 128 bits (322), Expect = 5e-30
Identities = 85/235 (36%), Positives = 120/235 (51%), Gaps = 48/235 (20%)
Query: 49 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 108
K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS LQ+ NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRIL 109
Query: 109 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR 168
PDML++ DP I + K + + ++S P S +GP+
Sbjct: 110 PDMLQQRRNDP---IIGHKTGKDAHATHLQSTEA---------SVPAKSGPSGPDNVQSL 157
Query: 169 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM 228
PL P P S +P +S + T I Q K S+
Sbjct: 158 PLWPLPKGQMSREKQPDP-----------------ESAPSQKLTGIAQ--PKKKVKVSVT 198
Query: 229 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAK 283
P ++P P+ + DFS F LLVD A++RAAE+EL+ K
Sbjct: 199 SP-----------------SSPELVSPEEHADFSSFLLLVDAAVQRAAELELEKK 236
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 113 bits (282), Expect = 2e-25
Identities = 54/114 (47%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
Query: 49 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 108
K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS L++ NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRIL 109
Query: 109 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGP 162
PDML++ DP + + A + S E+ + K+ + +T + +C GP
Sbjct: 110 PDMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKS--GPVVQTMYKACPCGP 161
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 82.4 bits (202), Expect = 4e-16
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDW 67
SS G+ + SG + D+ D +D + SS G + ++RG PK + I+R W
Sbjct: 204 SSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAW 263
Query: 68 LYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRR 127
L++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S
Sbjct: 264 LFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPE 323
Query: 128 GAKISETSSVESVMGIK 144
G I + + + ++
Sbjct: 324 GQPIGGYTETQPHVAVR 340
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 80.1 bits (196), Expect = 2e-15
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 37 IPLDLSS---SAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLST 93
+ LDL+S + + +RG LPK + I+R WL++H + YP+E EK ++ QT+L+
Sbjct: 273 VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTL 332
Query: 94 LQVCNWFINARRRLLPDMLRKDGKDP 119
LQV NWFINARRR+L ML DP
Sbjct: 333 LQVNNWFINARRRILQPMLDASNPDP 358
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 79.0 bits (193), Expect = 5e-15
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 16 TSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNA 75
T S G + S+ + + + D+ + L GS K +R G LPK + ++R WL++H +
Sbjct: 228 TLSPGTIRIQNSQLQLQLNQDLSI-LHQDDGSSKNKR-GVLPKHATNVMRSWLFQHIGHP 285
Query: 76 YPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDML 112
YP+E EK ++ QT+L+ LQV NWFINARRR+L ML
Sbjct: 286 YPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPML 322
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 75.1 bits (183), Expect = 7e-14
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 148 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 204
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 121
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 205 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 75.1 bits (183), Expect = 7e-14
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 236 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 292
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 121
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 293 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 75.1 bits (183), Expect = 7e-14
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 236 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 292
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 121
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 293 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 75.1 bits (183), Expect = 7e-14
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 223 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 279
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 121
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 280 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 335
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 74.3 bits (181), Expect = 1e-13
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG-------KRRRRGNLPKESVQILRDWL 68
SS G + SG + ++ D +D + S+ + ++RG PK + I+R WL
Sbjct: 232 SSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATNIMRAWL 291
Query: 69 YEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFT 123
++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q T
Sbjct: 292 FQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGT 346
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 74.3 bits (181), Expect = 1e-13
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 223 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 279
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 117
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 280 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 331
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 74.3 bits (181), Expect = 1e-13
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 236 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 292
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 117
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 293 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 74.3 bits (181), Expect = 1e-13
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG----------KRRRRGNLPKESVQILR 65
SS G + SG + ++ D +D + +S G+G ++++RG PK + I+R
Sbjct: 236 SSGGHASQSGDNSSEQGDGLDNSV---ASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMR 292
Query: 66 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 117
WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 293 AWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 61.2 bits (147), Expect = 1e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 38 PLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVC 97
P D + SG RR+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV
Sbjct: 133 PYDRYGTMDSGTRRK--NATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVS 190
Query: 98 NWFINARRRL 107
WF NARRRL
Sbjct: 191 TWFANARRRL 200
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 60.8 bits (146), Expect = 1e-09
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 55/183 (30%)
Query: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDW 67
SS G+ + SG + D+ D +D + SS G + ++RG PK + I+R W
Sbjct: 221 SSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAW 280
Query: 68 LYEHR----------------------------------------------YNAYPSEQE 81
L++H + YPSE++
Sbjct: 281 LFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQ 340
Query: 82 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVM 141
K L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + +
Sbjct: 341 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHV 400
Query: 142 GIK 144
++
Sbjct: 401 AVR 403
>gi|178057337 mohawk homeobox [Homo sapiens]
Length = 352
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 48 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 58.5 bits (140), Expect = 6e-09
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 45 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 104
+G+G+R+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV WF NAR
Sbjct: 145 SGAGRRK---NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 201
Query: 105 RRL 107
RRL
Sbjct: 202 RRL 204
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 48 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 48 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 55.1 bits (131), Expect = 7e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 50 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 109
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
Query: 110 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 164
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 54.7 bits (130), Expect = 9e-08
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 53 RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107
R N +++ L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 117 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,355,240
Number of Sequences: 37866
Number of extensions: 610328
Number of successful extensions: 2476
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2341
Number of HSP's gapped (non-prelim): 205
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.