RNF39 24156

Name: RNF39	Sequence: fasta or formatted (354aa)		NCBI GI: 25777716
Description: ring finger protein 39 isoform 2		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [420aa] ring finger protein 39 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 40 2 C cysteine 4.2 15 2 D aspartate 5.1 18 2 E glutamate 7.3 26 2 F phenylalanine 2.0 7 1 G glycine 9.6 34 2 H histidine 1.4 5 1 I isoleucine 2.0 7 1 K lysine 3.4 12 2 L leucine 9.3 33 2 M methionine 1.4 5 1 N asparagine 1.1 4 1 P proline 9.3 33 2 Q glutamine 1.4 5 1 R arginine 11.0 39 3 S serine 7.1 25 2 T threonine 4.8 17 1 V valine 5.4 19 2 W tryptophan 2.0 7 2 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 39 isoform 2 RNF39 0.914 ring finger protein 39 isoform 1 TRIM39 0.090 tripartite motif-containing 39 isoform 2 TRIM39 0.090 tripartite motif-containing 39 isoform 1 TRIM11 0.068 tripartite motif-containing 11 TRIML1 0.068 tripartite motif family-like 1 TRIM15 0.065 tripartite motif protein 15 TRIM41 0.063 tripartite motif-containing 41 isoform 1 TRIM58 0.063 tripartite motif-containing 58 TRIM7 0.062 tripartite motif-containing 7 isoform 1 TRIM7 0.062 tripartite motif-containing 7 isoform 4 BTN2A2 0.062 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.062 butyrophilin, subfamily 2, member A2 isoform a TRIM21 0.061 tripartite motif protein 21 BTN1A1 0.061 butyrophilin, subfamily 1, member A1 TRIM62 0.061 tripartite motif-containing 62 BTN2A1 0.061 butyrophilin, subfamily 2, member A1 isoform 1 precur... TRIM27 0.059 ret finger protein TRIM72 0.059 tripartite motif-containing 72 BTN3A1 0.058 butyrophilin, subfamily 3, member A1 isoform c [Hom... BTN3A1 0.058 butyrophilin, subfamily 3, member A1 isoform a [Homo... TRIM41 0.055 tripartite motif-containing 41 isoform 2 TRIM75 0.055 tripartite motif-containing 75 TRIM60 0.054 ring finger protein 129 TRIM68 0.054 ring finger protein 137 ERMAP 0.054 erythroblast membrane-associated protein precursor [... ERMAP 0.054 erythroblast membrane-associated protein precursor [... BTN3A3 0.052 butyrophilin, subfamily 3, member A3 isoform a BTN3A3 0.052 butyrophilin, subfamily 3, member A3 isoform b [Homo... TRIM7 0.051 tripartite motif-containing 7 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.