PSMD7 24130

Name: PSMD7	Sequence: fasta or formatted (324aa)		NCBI GI: 25777615
Description: proteasome 26S non-ATPase subunit 7		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 13 1 C cysteine 0.3 1 1 D aspartate 8.0 26 2 E glutamate 8.6 28 2 F phenylalanine 2.8 9 1 G glycine 4.9 16 1 H histidine 3.4 11 1 I isoleucine 5.2 17 2 K lysine 12.0 39 2 L leucine 9.9 32 2 M methionine 1.5 5 1 N asparagine 5.2 17 2 P proline 3.1 10 1 Q glutamine 3.4 11 1 R arginine 3.4 11 1 S serine 5.2 17 1 T threonine 3.7 12 2 V valine 11.4 37 3 W tryptophan 0.9 3 1 Y tyrosine 2.8 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 7 LOC100132108 0.431 PREDICTED: similar to hCG1644176 LOC100132108 0.427 PREDICTED: hypothetical protein LOC100132108 EIF3F 0.148 eukaryotic translation initiation factor 3, subunit 5... COPS6 0.132 COP9 signalosome subunit 6 COPS5 0.032 COP9 signalosome subunit 5 PSMD14 0.032 proteasome 26S subunit, non-ATPase 14 CNGA1 0.031 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.031 cyclic nucleotide gated channel alpha 1 isoform 2 [H... EIF3H 0.031 eukaryotic translation initiation factor 3, subunit 3... LOC100133698 0.031 PREDICTED: hypothetical protein CYLC2 0.027 cylicin 2 LOC100294088 0.027 PREDICTED: hypothetical protein, partial BRD3 0.027 bromodomain containing protein 3 LOC100294364 0.027 PREDICTED: hypothetical protein TAF3 0.027 RNA polymerase II transcription factor TAFII140 [Ho... CHAF1A 0.027 chromatin assembly factor 1, subunit A (p150) NCOR1 0.026 nuclear receptor co-repressor 1 LOC100131202 0.024 PREDICTED: hypothetical protein MAP1A 0.024 microtubule-associated protein 1A WDR87 0.024 NYD-SP11 protein LOC100131202 0.024 PREDICTED: hypothetical protein PSIP1 0.023 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.023 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... PSIP1 0.023 PC4 and SFRS1 interacting protein 1 isoform 2 LOC728792 0.023 PREDICTED: hypothetical protein SFRS12 0.023 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.023 splicing factor, arginine/serine-rich 12 isoform b [... LOC100133599 0.023 PREDICTED: hypothetical protein MAP1B 0.023 microtubule-associated protein 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.