BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] (416 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 822 0.0 gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens] 108 9e-24 gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens] 107 2e-23 gi|52317156 carcinoembryonic antigen-related cell adhesion molec... 78 2e-14 gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 75 1e-13 gi|156071472 CD2 molecule [Homo sapiens] 74 2e-13 gi|21361429 V-set and immunoglobulin domain containing 2 [Homo s... 69 6e-12 gi|4502687 CD84 molecule [Homo sapiens] 68 1e-11 gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] 67 3e-11 gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 67 4e-11 gi|67188443 CD276 antigen isoform a [Homo sapiens] 65 1e-10 gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 64 2e-10 gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 63 4e-10 gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 63 4e-10 gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 63 6e-10 gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 63 6e-10 gi|13376852 CD276 antigen isoform b [Homo sapiens] 62 7e-10 gi|8393638 F11 receptor precursor [Homo sapiens] 62 1e-09 gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] 62 1e-09 gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 62 1e-09 gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 62 1e-09 gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 61 2e-09 gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [H... 61 2e-09 gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [... 61 2e-09 gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 61 2e-09 gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho... 61 2e-09 gi|5901930 carcinoembryonic antigen-related cell adhesion molecu... 61 2e-09 gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 60 4e-09 gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 60 5e-09 gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 60 5e-09 >gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] Length = 416 Score = 822 bits (2122), Expect = 0.0 Identities = 416/416 (100%), Positives = 416/416 (100%) Query: 1 MKRERGALSRASRALRLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSST 60 MKRERGALSRASRALRLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSST Sbjct: 1 MKRERGALSRASRALRLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSST 60 Query: 61 SSDRPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTY 120 SSDRPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTY Sbjct: 61 SSDRPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTY 120 Query: 121 EVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTW 180 EVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTW Sbjct: 121 EVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTW 180 Query: 181 LKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSS 240 LKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSS Sbjct: 181 LKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSS 240 Query: 241 LYIILSTGGIFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEADTLPRSG 300 LYIILSTGGIFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEADTLPRSG Sbjct: 241 LYIILSTGGIFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEADTLPRSG 300 Query: 301 EQERKNPMALYILKDKDSPETEENPAPEPRSATEPGPPGYSVSPAVPGRSPGLPIRSARR 360 EQERKNPMALYILKDKDSPETEENPAPEPRSATEPGPPGYSVSPAVPGRSPGLPIRSARR Sbjct: 301 EQERKNPMALYILKDKDSPETEENPAPEPRSATEPGPPGYSVSPAVPGRSPGLPIRSARR 360 Query: 361 YPRSPARSPATGRTHSSPPRAPSSPGRSRSASRTLRTAGVHIIREQDEAGPVEISA 416 YPRSPARSPATGRTHSSPPRAPSSPGRSRSASRTLRTAGVHIIREQDEAGPVEISA Sbjct: 361 YPRSPARSPATGRTHSSPPRAPSSPGRSRSASRTLRTAGVHIIREQDEAGPVEISA 416 >gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens] Length = 450 Score = 108 bits (270), Expect = 9e-24 Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 10/227 (4%) Query: 17 LAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYS--STSSDRPVVKWQLKRD 74 L F L T G+ +T P +HG G++ L V Y + +SD ++ W +R Sbjct: 3 LKVFTTFLSFATGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQII-WLFERP 61 Query: 75 K--PVTVVQSIGTEVIGTLRPDYRDRIRLFE-NGSLLLSDLQLADEGTYEVEISITDD-T 130 P ++ S+ V+ L +Y+ + + N SLL++ LQ DEG Y V+++I + T Sbjct: 62 HTMPKYLLGSVNKSVVPDL--EYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGT 119 Query: 131 FTGEKTINLTVDVPISRPQVLVASTT-VLELSEAFTLNCSHENGTKPSYTWLKDGKPLLN 189 + + I +TVD P+++P V + + +E TL C E GT+ +Y WLK+G+P+ Sbjct: 120 LSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHT 179 Query: 190 DSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVY 236 S SP L I V ED YSC+V NP+S+ S + +Y Sbjct: 180 SSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIY 226 >gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens] Length = 462 Score = 107 bits (268), Expect = 2e-23 Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 12/223 (5%) Query: 21 VYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYS--STSSDRPVVKWQLKRDK--P 76 +YLLL G+ +T P +HG G++ L V Y + +SD ++ W +R P Sbjct: 21 IYLLLFGA--CSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQII-WLFERPHTMP 77 Query: 77 VTVVQSIGTEVIGTLRPDYRDRIRLFE-NGSLLLSDLQLADEGTYEVEISITDD-TFTGE 134 ++ S+ V+ L +Y+ + + N SLL++ LQ DEG Y V+++I + T + Sbjct: 78 KYLLGSVNKSVVPDL--EYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSAS 135 Query: 135 KTINLTVDVPISRPQVLVASTT-VLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRM 193 + I +TVD P+++P V + + +E TL C E GT+ +Y WLK+G+P+ S Sbjct: 136 QKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTY 195 Query: 194 LLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVY 236 SP L I V ED YSC+V NP+S+ S + +Y Sbjct: 196 SFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIY 238 >gi|52317156 carcinoembryonic antigen-related cell adhesion molecule isoform 2 [Homo sapiens] Length = 292 Score = 77.8 bits (190), Expect = 2e-14 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 6/176 (3%) Query: 88 IGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISR 147 + T P Y R + +G L ++ L D G Y ++++ + + + +L V +++ Sbjct: 88 VRTPGPAYSGRETISPSGDLHFQNVTLEDTGYYNLQVTYRNSQIE-QASHHLRVYESVAQ 146 Query: 148 PQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRV 207 P + +STTV E L C H N T S+ W+ + + L RM LS VLTI + Sbjct: 147 PSIQASSTTVTEKGSV-VLTC-HTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPI 204 Query: 208 LMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACW 263 ED Y C V NP+S RS P+K+TV ++L I++ G+ + LV C+ Sbjct: 205 RQEDAGEYQCEVSNPVSSNRSDPLKLTVKYDNTLGILI---GVLVGSLLVAALVCF 257 >gi|148612793 carcinoembryonic antigen-related cell adhesion molecule isoform 1 [Homo sapiens] Length = 293 Score = 74.7 bits (182), Expect = 1e-13 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 5/176 (2%) Query: 88 IGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISR 147 + T P Y R + +G L ++ L D G Y ++++ + + + +L V +++ Sbjct: 88 VRTPGPAYSGRETISPSGDLHFQNVTLEDTGYYNLQVTYRNSQIE-QASHHLRVYESVAQ 146 Query: 148 PQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRV 207 P + +STTV E L C H N T S+ W+ + + L RM LS VLTI + Sbjct: 147 PSIQASSTTVTEKGSV-VLTC-HTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPI 204 Query: 208 LMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACW 263 ED Y C V NP+S RS P+K+TV + IL G+ + LV C+ Sbjct: 205 RQEDAGEYQCEVSNPVSSNRSDPLKLTVKSDDNTLGILI--GVLVGSLLVAALVCF 258 >gi|156071472 CD2 molecule [Homo sapiens] Length = 351 Score = 74.3 bits (181), Expect = 2e-13 Identities = 81/354 (22%), Positives = 133/354 (37%), Gaps = 43/354 (12%) Query: 45 GTVGKSALLSVQYSSTSSDRPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFEN 104 G +G+ L + S D +KW+ DK E +D +LF+N Sbjct: 35 GALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKE-----KDTYKLFKN 89 Query: 105 GSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAF 164 G+L + L+ D+ Y+V I T EK +L + +S+P++ S T + Sbjct: 90 GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKI---SWTCINT---- 142 Query: 165 TLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPIS 224 TL C NGT P +DGK L R++ L+ + C N +S Sbjct: 143 TLTCEVMNGTDPELNLYQDGKHLKLSQRVITHKWTTSLSAK---------FKCTAGNKVS 193 Query: 225 QGRSLPVKITVYRRSSLYIILS-TGGIFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYMD 283 + S+ + +Y+I+ GG LL+ V + + ++KQ+ Sbjct: 194 KESSVEPVSCPEKGLDIYLIIGICGGGSLLMVFVALLVFYITKRKKQRS----------R 243 Query: 284 QNDDRLKPEADTLPRSGEQERKNPMALYILKDKDSPETEENPAPEPRSATE-----PGPP 338 +ND+ L+ A R +ER +P T ++P P P ++ P PP Sbjct: 244 RNDEELETRAH---RVATEERGRKPHQIPASTPQNPATSQHPPPPPGHRSQAPSHRPPPP 300 Query: 339 GYSVSPAVPGRSPGLPIRSARRYPRSPARSPATGRTHSSPPRAPSSPGRSRSAS 392 G+ V R P + P P R PP + S S++ Sbjct: 301 GHRVQHQPQKRPPAPSGTQVHQQKGPPLPRP---RVQPKPPHGAAENSLSPSSN 351 >gi|21361429 V-set and immunoglobulin domain containing 2 [Homo sapiens] Length = 327 Score = 69.3 bits (168), Expect = 6e-12 Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 15/270 (5%) Query: 34 VNITSPVRLIHGTVGKSALLSVQYSSTSSDRPVVKWQ-LKRDKPVTVVQSIGTEVIGTLR 92 V + P + +GK+A L+ YS++ D ++W ++ KP++ I G L Sbjct: 24 VEVKVPTEPLSTPLGKTAELTCTYSTSVGDSFALEWSFVQPGKPISESHPILYFTNGHLY 83 Query: 93 P--DYRDRIRLFEN------GSLLLSDLQLADEGTYEVEISITDDTFT-GEKTINLTVDV 143 P R+ L +N +L L+D+ +D GTY +++ D +T G INLTV V Sbjct: 84 PTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTVLV 143 Query: 144 PISRPQVLVASTTVLELSEAFTLNCSHENGT-KPSYTWLKDGK-PLLNDSRMLLSPDQKV 201 P S P L + + + + L CS G KP Y W++ G P + M+ Sbjct: 144 PPSNP--LCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGTFPTPSPGSMVQDEVSGQ 201 Query: 202 LTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCA 261 L +T + + Y C+ N + S + ++V S + + G+ L V L++V A Sbjct: 202 LILTNLSLTSSGTYRCVATNQMGSA-SCELTLSVTEPSQGRVAGALIGVLLGVLLLSVAA 260 Query: 262 CWKPSKRKQKKLEKQNSLEYMDQNDDRLKP 291 +K++ + + + D +D + P Sbjct: 261 FCLVRFQKERGKKPKETYGGSDLREDAIAP 290 >gi|4502687 CD84 molecule [Homo sapiens] Length = 328 Score = 68.2 bits (165), Expect = 1e-11 Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 24/273 (8%) Query: 20 FVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSSTSSDRPVVKWQLKRDKP-VT 78 ++ LL +QT P E S + ++G +G+S V + ++ W K VT Sbjct: 7 WILLLCLQTWP-EAAGKDSEIFTVNGILGESVTFPVNIQEPRQVK-IIAWTSKTSVAYVT 64 Query: 79 VVQSIGTEVIGTLRPDYRDRIR-LFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTI 137 S V+ +Y +RI L N +L++SDL++ D G Y+ +I+ D +T K Sbjct: 65 PGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRY 124 Query: 138 NLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTK-PSYTWLKDGKPLLNDSRMLLS 196 NL + + +P++ + + + TL CS E K +Y W L Sbjct: 125 NLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSP------------LG 172 Query: 197 PDQKVLTITRVLMEDDDLYSCMVENPIS------QGRSLPVKITV-YRRSSLYIILSTGG 249 + VL I + + + Y+C +NP+S R L I + +R ++ Sbjct: 173 EEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAM 232 Query: 250 IFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYM 282 FLLV +++ ++ KR+Q K+ Y+ Sbjct: 233 FFLLVLILSSVFLFRLFKRRQDAASKKTIYTYI 265 >gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] Length = 319 Score = 67.0 bits (162), Expect = 3e-11 Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 35/309 (11%) Query: 16 RLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQY-SSTSSDRPVVKWQ---- 70 ++ P ++ L ++ +++ +P ++ + GKS L Y +STSS +++W Sbjct: 4 KMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLL 63 Query: 71 LKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENG-----SLLLSDLQLADEGTYEVEIS 125 ++ V S + G L Y++R+ + N S+ + L +AD GTYE +S Sbjct: 64 THTERVVIWPFSNKNYIHGEL---YKNRVSISNNAEQSDASITIDQLTMADNGTYECSVS 120 Query: 126 ITDDTFTGEKT-INLTVDVPISRPQVLVASTTVLELSEAFTLNC-SHENGTKPSYTWLKD 183 + D K+ + L V VP S+P+ + T+ + L C S E P Y+W + Sbjct: 121 LMSDLEGNTKSRVRLLVLVPPSKPECGIEGETI--IGNNIQLTCQSKEGSPTPQYSWKRY 178 Query: 184 GKPLLNDSRMLLSP-DQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRS--- 239 +LN + L P + +++ + + Y C N +G ITV RS Sbjct: 179 N--ILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSN--EEGTQF-CNITVAVRSPSM 233 Query: 240 --SLYIILSTGGIFLLV---TLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEAD 294 +LY+ ++ G + L+ ++ C C + K + + + E ++ ++L+ Sbjct: 234 NVALYVGIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLR---- 289 Query: 295 TLPRSGEQE 303 L R E+E Sbjct: 290 ELSREREEE 298 >gi|32699028 V-set and immunoglobulin domain containing 1 [Homo sapiens] Length = 387 Score = 66.6 bits (161), Expect = 4e-11 Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 25/322 (7%) Query: 34 VNITSPVRLIHGTVGKSALLSVQYSSTSSDRPV--VKWQL---KRDKPVTVVQSIGTEVI 88 V +T P ++ TVG + L Y++T + R ++W K +P+++ S G + + Sbjct: 22 VQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFFHKKEMEPISIYFSQGGQAV 81 Query: 89 GTLRPDYRDRIRLFE---NGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPI 145 ++DRI N S+ +S +Q AD G Y +++ D F G+ L V V + Sbjct: 82 AI--GQFKDRITGSNDPGNASITISHMQPADSGIYICDVNNPPD-FLGQNQGILNVSVLV 138 Query: 146 SRPQVLVASTTVLELSEAFTLNCSHENGT-KPSYTWLK-DGKPLLNDSRMLLSPDQKVLT 203 + L + E +L+C GT P Y W K +G+ ++ + +P +L Sbjct: 139 KPSKPLCSVQGRPETGHTISLSCLSALGTPSPVYYWHKLEGRDIV-PVKENFNPTTGILV 197 Query: 204 ITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACW 263 I + + Y C N + S + +T I+ + G + ++ C+ Sbjct: 198 IGNLTNFEQGYYQCTAINRLGNS-SCEIDLTSSHPEVGIIVGALIGSLVGAAIIISVVCF 256 Query: 264 KPSKRKQKKLEKQNS----LEYMDQNDDRLKPEADTLPRSGEQERKNPMALY------IL 313 +K K K E+ + LE M + + R + EA + + E P +++ I Sbjct: 257 ARNKAKAKAKERNSKTIAELEPMTKINPRGESEAMPREDATQLEVTLPSSIHETGPDTIQ 316 Query: 314 KDKDSPETEENPAPEPRSATEP 335 + P+ + PAPEP +EP Sbjct: 317 EPDYEPKPTQEPAPEPAPGSEP 338 >gi|67188443 CD276 antigen isoform a [Homo sapiens] Length = 534 Score = 64.7 bits (156), Expect = 1e-10 Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 29/297 (9%) Query: 27 QTDPLEGVNITSPVRLIHGTVGKSALLSVQYSST---SSDRPVVKWQLKRDKPVTVVQSI 83 Q P V + P + VG A L +S S + + WQL K + + Sbjct: 240 QRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTE 299 Query: 84 GTEVIGTLRPDYRDRIRLFE------NGSLLLSDLQLADEGTYEVEISITDDTFTGEKTI 137 G + Y +R LF N SL L +++ADEG++ +SI D G + Sbjct: 300 GRDQGSA----YANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRD---FGSAAV 352 Query: 138 NLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGK--PLL-NDSRML 194 +L V P S+P + + L + T+ CS G + + +DG+ PL N + Sbjct: 353 SLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQ 412 Query: 195 LSPDQ---KVLTITRVLMEDDDLYSCMVENPI-SQGRSLPVKIT----VYRRSSLYIILS 246 ++ +Q V ++ RV++ + YSC+V NP+ Q V IT + +L++ + Sbjct: 413 MANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTFPPEALWVTVG 472 Query: 247 TGGIFLLVTLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEADTLPRSGEQE 303 + + + CW+ K KQ E+ E D + K L S +E Sbjct: 473 LSVCLIALLVALAFVCWR--KIKQSCEEENAGAEDQDGEGEGSKTALQPLKHSDSKE 527 Score = 56.6 bits (135), Expect = 4e-08 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 15/143 (10%) Query: 95 YRDRIRLFE------NGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRP 148 Y +R LF N SL L +++ADEG++ +SI D G ++L V P S+P Sbjct: 89 YANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRD---FGSAAVSLQVAAPYSKP 145 Query: 149 QVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGK--PLL-NDSRMLLSPDQ---KVL 202 + + L + T+ CS G + + +DG+ PL N + ++ +Q V Sbjct: 146 SMTLEPNKDLRPGDTVTITCSSYQGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFDVH 205 Query: 203 TITRVLMEDDDLYSCMVENPISQ 225 +I RV++ + YSC+V NP+ Q Sbjct: 206 SILRVVLGANGTYSCLVRNPVLQ 228 >gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1 [Homo sapiens] Length = 1093 Score = 64.3 bits (155), Expect = 2e-10 Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 43/316 (13%) Query: 46 TVGKSALLSVQYSSTSSDRPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIR--LFE 103 T+ + + ++ ++T P + WQ GT P R+R + + Sbjct: 609 TIRTTTMARLECAATGHPNPQIAWQKDG---------------GTDFPAARERRMHVMPD 653 Query: 104 NGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEA 163 + ++D+++ D G Y S T G + N T+ V + V+ V+ + E Sbjct: 654 DDVFFITDVKIDDAGVY----SCTAQNSAGSISANATLTVLETPSLVVPLEDRVVSVGET 709 Query: 164 FTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPI 223 L C P TW K +PL R L+PD ++L + V+ ED Y+C + N + Sbjct: 710 VALQCKATGNPPPRITWFKGDRPLSLTERHHLTPDNQLLVVQNVVAEDAGRYTCEMSNTL 769 Query: 224 SQGRSLPVKITVYRRSSLYIILSTGGIF--------LLVTLVTVCACWKPSKRKQKKLEK 275 R+ +++V + +T GIF +L +LV VC ++ K+ + Sbjct: 770 GTERA-HSQLSVLPAAGCRKDGTTVGIFTIAVVSSIVLTSLVWVCIIYQTRKKSE----- 823 Query: 276 QNSLEYMDQNDDRLKPEADTLPRSGEQERKNPMALYILKDKDSPETE---ENPAPEPRSA 332 EY N D D Q + +++ + P+ E+ PR A Sbjct: 824 ----EYSVTNTDETVVPPDVPSYLSSQGTLSDRQETVVRTEGGPQANGHIESNGVCPRDA 879 Query: 333 TE-PGPPGYSVSPAVP 347 + P P +SV+ P Sbjct: 880 SHFPEPDTHSVACRQP 895 >gi|40255013 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) [Homo sapiens] Length = 344 Score = 63.2 bits (152), Expect = 4e-10 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 6/153 (3%) Query: 87 VIGTLR----PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVD 142 VIGT + P Y R ++ N SLL+ ++ D G Y +++ I D E T V Sbjct: 83 VIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFYTLQV-IKSDLVNEEATGQFHVY 141 Query: 143 VPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVL 202 + +P + ++ +E +A C E +Y W +G+ L R+ LS L Sbjct: 142 PELPKPSISSNNSNPVEDKDAVAFTCEPEV-QNTTYLWWVNGQSLPVSPRLQLSNGNMTL 200 Query: 203 TITRVLMEDDDLYSCMVENPISQGRSLPVKITV 235 T+ V D Y C ++NP S RS PV + V Sbjct: 201 TLLSVKRNDAGSYECEIQNPASANRSDPVTLNV 233 >gi|85861202 carcinoembryonic antigen-related cell adhesion molecule 16 [Homo sapiens] Length = 484 Score = 63.2 bits (152), Expect = 4e-10 Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 17/222 (7%) Query: 15 LRLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSSTSSDRPVVKWQLKRD 74 L + + + L P EG N+T ++HG G+ S T S +V Sbjct: 75 LNVGAEISITLEPAQPSEGDNVTL---VVHGLSGELLAYSWYAGPTLSVSYLV------- 124 Query: 75 KPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGE 134 + + S G E G P + R + +GSL + + GTY ++ + T Sbjct: 125 --ASYIVSTGDETPG---PAHTGREAVRPDGSLDIQGILPRHSGTYILQ-TFNRQLQTEV 178 Query: 135 KTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRML 194 ++ V +++P VL ST ++E + L CS + T W +G L R+ Sbjct: 179 GYGHVQVHEILAQPTVLANSTALVERRDTLRLMCSSPSPTA-EVRWFFNGGALPVALRLG 237 Query: 195 LSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVY 236 LSPD +VL + E+ Y C V NP+S RS P+ +TVY Sbjct: 238 LSPDGRVLARHGIRREEAGAYQCEVWNPVSVSRSEPINLTVY 279 >gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b [Homo sapiens] Length = 419 Score = 62.8 bits (151), Expect = 6e-10 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R ++ N SLL+ ++ D G+Y + I + D TG T L ++ P +P Sbjct: 93 PAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETP--KPS 150 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + + E EA +L C E SY W +G+ L R+ LS + L + V Sbjct: 151 ISSSKLNPREAMEAVSLTCDPET-PDASYLWWMNGQSLPMSHRLQLSETNRTLFLLGVTK 209 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS P + + Sbjct: 210 YTAGPYECEIRNPVSASRSDPFTLNL 235 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L + + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 288 RPIENRILILPSVTRNETGPYQCEIR---DQYGGIRSYPVTLNV-LYGPDLPRIYPSFTY 343 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+CS ++ Y+W +GK L+ + L I ++ + LY+C Sbjct: 344 YRSGEVLYLSCSADSNPPAQYSWTINGKFQLSGQK---------LFIPQITTKHSGLYAC 394 Query: 218 MVENPIS---QGRSLPVKIT 234 V N + +S+ VK++ Sbjct: 395 SVRNSATGKESSKSMTVKVS 414 Score = 35.4 bits (80), Expect = 0.096 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 98 RIRLFE-NGSLLLSDLQLADEGTYEVEISITDDTFTGEK-TINLTVDVPISRPQVLVAST 155 R++L E N +L L + G YE EI + T+NL +P +P + + + Sbjct: 192 RLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP--KPYITINNL 249 Query: 156 TVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLY 215 E + C ++ +Y W +G+ L R+ + ++L + V + Y Sbjct: 250 KPRENKDVLNFTCEPKSENY-TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPY 308 Query: 216 SCMVENPISQGRSLPVKITV 235 C + + RS PV + V Sbjct: 309 QCEIRDQYGGIRSYPVTLNV 328 >gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [Homo sapiens] Length = 426 Score = 62.8 bits (151), Expect = 6e-10 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R ++ N SLL+ ++ D G+Y + I + D TG T L ++ P +P Sbjct: 93 PAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETP--KPS 150 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + + E EA +L C E SY W +G+ L R+ LS + L + V Sbjct: 151 ISSSKLNPREAMEAVSLTCDPET-PDASYLWWMNGQSLPMSHRLQLSETNRTLFLLGVTK 209 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS P + + Sbjct: 210 YTAGPYECEIRNPVSASRSDPFTLNL 235 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L + + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 288 RPIENRILILPSVTRNETGPYQCEIR---DQYGGIRSYPVTLNV-LYGPDLPRIYPSFTY 343 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+CS ++ Y+W +GK L+ + L I ++ + LY+C Sbjct: 344 YRSGEVLYLSCSADSNPPAQYSWTINGKFQLSGQK---------LFIPQITTKHSGLYAC 394 Query: 218 MVENPIS---QGRSLPVKIT 234 V N + +S+ VK++ Sbjct: 395 SVRNSATGKESSKSMTVKVS 414 Score = 35.4 bits (80), Expect = 0.096 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 98 RIRLFE-NGSLLLSDLQLADEGTYEVEISITDDTFTGEK-TINLTVDVPISRPQVLVAST 155 R++L E N +L L + G YE EI + T+NL +P +P + + + Sbjct: 192 RLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP--KPYITINNL 249 Query: 156 TVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLY 215 E + C ++ +Y W +G+ L R+ + ++L + V + Y Sbjct: 250 KPRENKDVLNFTCEPKSENY-TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPY 308 Query: 216 SCMVENPISQGRSLPVKITV 235 C + + RS PV + V Sbjct: 309 QCEIRDQYGGIRSYPVTLNV 328 >gi|13376852 CD276 antigen isoform b [Homo sapiens] Length = 316 Score = 62.4 bits (150), Expect = 7e-10 Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 22/226 (9%) Query: 95 YRDRIRLFE------NGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRP 148 Y +R LF N SL L +++ADEG++ +SI D G ++L V P S+P Sbjct: 89 YANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRD---FGSAAVSLQVAAPYSKP 145 Query: 149 QVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGK--PLL-NDSRMLLSPDQ---KVL 202 + + L + T+ CS G + + +DG+ PL N + ++ +Q V Sbjct: 146 SMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFDVH 205 Query: 203 TITRVLMEDDDLYSCMVENPI-SQGRSLPVKIT----VYRRSSLYIILSTGGIFLLVTLV 257 ++ RV++ + YSC+V NP+ Q V IT + +L++ + + + + Sbjct: 206 SVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVA 265 Query: 258 TVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEADTLPRSGEQE 303 CW+ K KQ E+ E D + K L S +E Sbjct: 266 LAFVCWR--KIKQSCEEENAGAEDQDGEGEGSKTALQPLKHSDSKE 309 >gi|8393638 F11 receptor precursor [Homo sapiens] Length = 299 Score = 62.0 bits (149), Expect = 1e-09 Identities = 66/262 (25%), Positives = 103/262 (39%), Gaps = 25/262 (9%) Query: 6 GALSRASRALRLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSSTSSDRP 65 G ++ R L L F+ +L+ + L V + S + LS YS SS R Sbjct: 2 GTKAQVERKL-LCLFILAILLCSLALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPR- 59 Query: 66 VVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEIS 125 V+W+ + +V + Y DR+ G + + D GTY +S Sbjct: 60 -VEWKFDQGDTTRLVC-----YNNKITASYEDRVTFLPTG-ITFKSVTREDTGTYTCMVS 112 Query: 126 ITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPS-YTWLKDG 184 GE + L V VP S+P V + S+ + L CS ++G+ PS YTW KDG Sbjct: 113 EEGGNSYGEVKVKLIVLVPPSKPTVNIPSSAT--IGNRAVLTCSEQDGSPPSEYTWFKDG 170 Query: 185 KPL---------LNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITV 235 + ++S +L+P L + D YSC N G P+ Sbjct: 171 IVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARN----GYGTPMTSNA 226 Query: 236 YRRSSLYIILSTGGIFLLVTLV 257 R ++ + +LVTL+ Sbjct: 227 VRMEAVERNVGVIVAAVLVTLI 248 >gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] Length = 426 Score = 62.0 bits (149), Expect = 1e-09 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R + N SLL+ ++ D G+Y + I DD TG T L ++ P +P Sbjct: 93 PAYSGRETAYSNASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLETP--KPS 150 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + ++ E EA +L C E SY W +G+ L + LS + L + V Sbjct: 151 ISSSNLNPRETMEAVSLTCDPET-PDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTK 209 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS PV + + Sbjct: 210 YTAGPYECEIRNPVSASRSDPVTLNL 235 Score = 35.4 bits (80), Expect = 0.096 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L + + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 288 RPIENRILILPSVTRNETGPYQCEIR---DRYGGIRSDPVTLNV-LYGPDLPRIYPSFTY 343 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+CS ++ Y+W +N+ L P QK L I + + LY C Sbjct: 344 YRSGEVLYLSCSADSNPPAQYSW------TINEKFQL--PGQK-LFIRHITTKHSGLYVC 394 Query: 218 MVENPIS---QGRSLPVKIT 234 V N + +S+ V+++ Sbjct: 395 SVRNSATGKESSKSMTVEVS 414 Score = 33.5 bits (75), Expect = 0.37 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Query: 104 NGSLLLSDLQLADEGTYEVEI-SITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSE 162 N +L L + G YE EI + + + T+NL +P +P + + + E + Sbjct: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP--KPYITINNLNPRENKD 256 Query: 163 AFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENP 222 C ++ +Y W +G+ L R+ + ++L + V + Y C + + Sbjct: 257 VLNFTCEPKSENY-TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315 Query: 223 ISQGRSLPVKITV 235 RS PV + V Sbjct: 316 YGGIRSDPVTLNV 328 >gi|19923195 carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1 precursor [Homo sapiens] Length = 526 Score = 61.6 bits (148), Expect = 1e-09 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 18/240 (7%) Query: 107 LLLSDLQLADEGTYEVEI--SITDDTFTGEKTINLTVDVPI-SRPQVLVASTTVLELSEA 163 L + ++ + + G+Y S+T T KTI +T P+ ++PQ+ + TTV ++ Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDS 343 Query: 164 FTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPI 223 L CS N T S W + L + RM LS L+I V ED Y C V NPI Sbjct: 344 VNLTCS-TNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPI 402 Query: 224 SQGRSLPVKITV-YRRSSLYIILSTG-------GIFLLVTLVTVC-ACWKPSKRKQKKLE 274 S+ +S P+ + V Y LS G G+ LV L+ V AC+ + + + Sbjct: 403 SKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGVVALVALIAVALACFLHFGKTGRASD 462 Query: 275 KQNSLEYMDQNDDRLKPEADTLPRSGEQERKNPMALYILKDKDSPETEENPAPEPRSATE 334 +++ E+ + + ++ P + N + L + T+ A +ATE Sbjct: 463 QRDLTEHKPSVSNHTQDHSNDPP-----NKMNEVTYSTLNFEAQQPTQPTSASPSLTATE 517 Score = 61.2 bits (147), Expect = 2e-09 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%) Query: 82 SIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTV 141 +IGT+ T P R ++ N SLL+ ++ D G Y +++ I D E T V Sbjct: 83 AIGTQQ-ATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQV-IKSDLVNEEATGQFHV 140 Query: 142 DVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKV 201 + +P + ++ +E +A C E +Y W + + L R+ LS + Sbjct: 141 YPELPKPSISSNNSNPVEDKDAVAFTCEPET-QDTTYLWWINNQSLPVSPRLQLSNGNRT 199 Query: 202 LTITRVLMEDDDLYSCMVENPISQGRSLPVKITV 235 LT+ V D Y C ++NP+S RS PV + V Sbjct: 200 LTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNV 233 >gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [Homo sapiens] Length = 419 Score = 61.6 bits (148), Expect = 1e-09 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 6/151 (3%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R R++ N SLL+ ++ D G+Y + I D TG T L ++ P +P Sbjct: 93 PAYSGRERVYSNASLLIQNVTQEDAGSYTLHIIKRRDGTGGVTGHFTFTLHLETP--KPS 150 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + ++ E EA L C SY W +G+ L R+ LS + L I V Sbjct: 151 ISSSNLNPREAMEAVILTCDPATPAA-SYQWWMNGQSLPMTHRLQLSKTNRTLFIFGVTK 209 Query: 210 EDDDLYSCMVENPISQGRSLPVKITVYRRSS 240 Y C + NP+S RS PV + + + S Sbjct: 210 YIAGPYECEIRNPVSASRSDPVTLNLLPKLS 240 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L ++ + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 288 RPIENRILILPNVTRNETGPYQCEIR---DRYGGIRSDPVTLNV-LYGPDLPSIYPSFTY 343 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+C E+ + Y+W +GK L+ + L+I ++ + LY+C Sbjct: 344 YRSGENLYLSCFAESNPRAQYSWTINGKFQLSGQK---------LSIPQITTKHSGLYAC 394 Query: 218 MVENPIS---QGRSLPVKIT 234 V N + +S+ VK++ Sbjct: 395 SVRNSATGKESSKSITVKVS 414 Score = 33.9 bits (76), Expect = 0.28 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 2/118 (1%) Query: 118 GTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPS 177 G YE EI + + + L + +S+P + + + E + T C ++ + Sbjct: 213 GPYECEIR-NPVSASRSDPVTLNLLPKLSKPYITINNLNPRENKDVLTFTCEPKSKNY-T 270 Query: 178 YTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITV 235 Y W +G+ L R+ + ++L + V + Y C + + RS PV + V Sbjct: 271 YIWWLNGQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYGGIRSDPVTLNV 328 >gi|68161541 carcinoembryonic antigen-related cell adhesion molecule 1 isoform 2 precursor [Homo sapiens] Length = 464 Score = 61.2 bits (147), Expect = 2e-09 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%) Query: 82 SIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTV 141 +IGT+ T P R ++ N SLL+ ++ D G Y +++ I D E T V Sbjct: 83 AIGTQQ-ATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQV-IKSDLVNEEATGQFHV 140 Query: 142 DVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKV 201 + +P + ++ +E +A C E +Y W + + L R+ LS + Sbjct: 141 YPELPKPSISSNNSNPVEDKDAVAFTCEPET-QDTTYLWWINNQSLPVSPRLQLSNGNRT 199 Query: 202 LTITRVLMEDDDLYSCMVENPISQGRSLPVKITV 235 LT+ V D Y C ++NP+S RS PV + V Sbjct: 200 LTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNV 233 Score = 60.5 bits (145), Expect = 3e-09 Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Query: 107 LLLSDLQLADEGTYEVEI--SITDDTFTGEKTINLTVDVPI-SRPQVLVASTTVLELSEA 163 L + ++ + + G+Y S+T T KTI +T P+ ++PQ+ + TTV ++ Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDS 343 Query: 164 FTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPI 223 L CS N T S W + L + RM LS L+I V ED Y C V NPI Sbjct: 344 VNLTCS-TNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPI 402 Query: 224 SQGRSLPVKITV-YRRSSLYIILSTG-------GIFLLVTLVTVC-ACW 263 S+ +S P+ + V Y LS G G+ LV L+ V AC+ Sbjct: 403 SKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGVVALVALIAVALACF 451 >gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [Homo sapiens] Length = 435 Score = 61.2 bits (147), Expect = 2e-09 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R ++ N SLL+ ++ D G+Y + I D TG T+ L + P +P Sbjct: 92 PAYSGRETVYSNASLLIQNVTQEDAGSYTLHIIKRGDGTGGVTGYFTVTLYSETP--KPS 149 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + ++ E+ EA L C E SY WL +G+ L R+ LS + L + V Sbjct: 150 ISSSNLNPREVMEAVRLICDPET-PDASYLWLLNGQNLPMTHRLQLSKTNRTLYLFGVTK 208 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS PV + + Sbjct: 209 YIAGPYECEIRNPVSASRSDPVTLNL 234 Score = 35.4 bits (80), Expect = 0.096 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L + + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 287 RPIENRILILPSVTRNETGPYQCEIR---DRYGGIRSNPVTLNV-LYGPDLPRIYPSFTY 342 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+C ++ Y+W +GK L+ + L I ++ LY+C Sbjct: 343 YRSGENLDLSCFADSNPPAEYSWTINGKFQLSGQK---------LFIPQITTNHSGLYAC 393 Query: 218 MVENPISQ---GRSLPVKIT 234 V N + +S+ VK++ Sbjct: 394 SVRNSATGKEISKSMIVKVS 413 Score = 32.7 bits (73), Expect = 0.62 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Query: 104 NGSLLLSDLQLADEGTYEVEI-SITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSE 162 N +L L + G YE EI + + + T+NL +P+ P + + + E + Sbjct: 198 NRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLPM--PYITINNLNPREKKD 255 Query: 163 AFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENP 222 C ++ +Y W +G+ L R+ + ++L + V + Y C + + Sbjct: 256 VLAFTCEPKSRNY-TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 314 Query: 223 ISQGRSLPVKITV 235 RS PV + V Sbjct: 315 YGGIRSNPVTLNV 327 >gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [Homo sapiens] Length = 424 Score = 61.2 bits (147), Expect = 2e-09 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R ++ N SLL+ ++ D G+Y + I D TG T+ L + P +P Sbjct: 92 PAYSGRETVYSNASLLIQNVTQEDAGSYTLHIIKRGDGTGGVTGYFTVTLYSETP--KPS 149 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + ++ E+ EA L C E SY WL +G+ L R+ LS + L + V Sbjct: 150 ISSSNLNPREVMEAVRLICDPET-PDASYLWLLNGQNLPMTHRLQLSKTNRTLYLFGVTK 208 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS PV + + Sbjct: 209 YIAGPYECEIRNPVSASRSDPVTLNL 234 Score = 35.4 bits (80), Expect = 0.096 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 18/140 (12%) Query: 100 RLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV--LVASTTV 157 R EN L+L + + G Y+ EI D + G ++ +T++V + P + + S T Sbjct: 287 RPIENRILILPSVTRNETGPYQCEIR---DRYGGIRSNPVTLNV-LYGPDLPRIYPSFTY 342 Query: 158 LELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSC 217 E L+C ++ Y+W +GK L+ + L I ++ LY+C Sbjct: 343 YRSGENLDLSCFADSNPPAEYSWTINGKFQLSGQK---------LFIPQITTNHSGLYAC 393 Query: 218 MVENPISQ---GRSLPVKIT 234 V N + +S+ VK++ Sbjct: 394 SVRNSATGKEISKSMIVKVS 413 Score = 32.7 bits (73), Expect = 0.62 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Query: 104 NGSLLLSDLQLADEGTYEVEI-SITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSE 162 N +L L + G YE EI + + + T+NL +P+ P + + + E + Sbjct: 198 NRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLPM--PYITINNLNPREKKD 255 Query: 163 AFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENP 222 C ++ +Y W +G+ L R+ + ++L + V + Y C + + Sbjct: 256 VLAFTCEPKSRNY-TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 314 Query: 223 ISQGRSLPVKITV 235 RS PV + V Sbjct: 315 YGGIRSNPVTLNV 327 >gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [Homo sapiens] Length = 326 Score = 61.2 bits (147), Expect = 2e-09 Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 6/146 (4%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDT---FTGEKTINLTVDVPISRPQ 149 P Y R R++ N SLL+ ++ D G+Y + I D TG T L ++ P +P Sbjct: 93 PAYSGRERVYSNASLLIQNVTQEDAGSYTLHIIKRRDGTGGVTGHFTFTLHLETP--KPS 150 Query: 150 VLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLM 209 + ++ E EA L C SY W +G+ L R+ LS + L I V Sbjct: 151 ISSSNLNPREAMEAVILTCDPATPAA-SYQWWMNGQSLPMTHRLQLSKTNRTLFIFGVTK 209 Query: 210 EDDDLYSCMVENPISQGRSLPVKITV 235 Y C + NP+S RS PV + + Sbjct: 210 YIAGPYECEIRNPVSASRSDPVTLNL 235 Score = 33.5 bits (75), Expect = 0.37 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 20/123 (16%) Query: 118 GTYEVEI-SITDDTFTGEKTINLT--VDVPISRPQVLVASTTVLELSEAFTLNCSHENGT 174 G YE EI + + + T+NL D+P P S T E L+C E+ Sbjct: 213 GPYECEIRNPVSASRSDPVTLNLLHGPDLPSIYP-----SFTYYRSGENLYLSCFAESNP 267 Query: 175 KPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPIS---QGRSLPV 231 + Y+W +GK L+ + L+I ++ + LY+C V N + +S+ V Sbjct: 268 RAQYSWTINGKFQLSGQK---------LSIPQITTKHSGLYACSVRNSATGKESSKSITV 318 Query: 232 KIT 234 K++ Sbjct: 319 KVS 321 >gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo sapiens] Length = 365 Score = 60.8 bits (146), Expect = 2e-09 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 20/269 (7%) Query: 23 LLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQYSSTSSDR-PV-VKWQLKRDKPVTVV 80 LL D ++IT+P +I G++A L +++ + D+ P+ ++W + V Sbjct: 9 LLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVD 68 Query: 81 QSI----GTEVIGTLRPDYRDRIRLFEN------GSLLLSDLQLADEGTYEVEISITDDT 130 Q I G ++ PD + R+ N S+ +++LQL+D GTY+ ++ Sbjct: 69 QVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPG- 127 Query: 131 FTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKP-SYTWLKDGKPLLN 189 K I+L V V S + V + E+ F + C + G+ P Y W K Sbjct: 128 -VANKKIHLVVLVKPSGARCYVDGSE--EIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKM 184 Query: 190 DSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTG- 248 + L V+++ E YSC V N + + L +++ V S+ +++ Sbjct: 185 PTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCL-LRLNVVPPSNKAGLIAGAI 243 Query: 249 -GIFLLVTLVTVCACWKPSKRKQKKLEKQ 276 G L + L+ + KR+++K EK+ Sbjct: 244 IGTLLALALIGLIIFCCRKKRREEKYEKE 272 >gi|5901930 carcinoembryonic antigen-related cell adhesion molecule 7 [Homo sapiens] Length = 265 Score = 60.8 bits (146), Expect = 2e-09 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLV 152 P + R ++ NG+LL+ ++ D G Y + + I ++ E T V +P + Sbjct: 94 PAHNGRETIYPNGTLLIQNVTHNDAGFYTLHV-IKENLVNEEVTRQFYVFSEPPKPSITS 152 Query: 153 ASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDD 212 + +E + L C E +Y W + + LL R+LLS D + L + D Sbjct: 153 NNFNPVENKDIVVLTCQPET-QNTTYLWWVNNQSLLVSPRLLLSTDNRTLVLLSATKNDI 211 Query: 213 DLYSCMVENPISQGRSLPVKITV 235 Y C ++NP+ RS PV + V Sbjct: 212 GPYECEIQNPVGASRSDPVTLNV 234 >gi|21314600 carcinoembryonic antigen-related cell adhesion molecule 8 [Homo sapiens] Length = 349 Score = 60.1 bits (144), Expect = 4e-09 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%) Query: 93 PDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLV 152 P Y +R ++ N SLL+ ++ D G+Y +++ I + + E T +V +P + Sbjct: 93 PAYSNRETIYPNASLLMRNVTRNDTGSYTLQV-IKLNLMSEEVTGQFSVHPETPKPSISS 151 Query: 153 ASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDD 212 ++ +E +A C E +Y W +G+ L R+ LS + LT+ V D Sbjct: 152 NNSNPVEDKDAVAFTCEPET-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDV 210 Query: 213 DLYSCMVENPISQGRSLPVKITV 235 Y C ++NP S S PV + V Sbjct: 211 GPYECEIQNPASANFSDPVTLNV 233 >gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapiens] Length = 848 Score = 59.7 bits (143), Expect = 5e-09 Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%) Query: 76 PVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEK 135 P + + G +VI L+ D R + N L + ++ DEGTY E I K Sbjct: 147 PTIIWKHKGRDVI--LKKDVR--FIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFK 202 Query: 136 TINLTVDVP--ISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLL---ND 190 I + V+VP I Q +V +T L ++ TL C E +P+ +W KDG+ + +D Sbjct: 203 DIQVIVNVPPTIQARQNIVNATA--NLGQSVTLVCDAEGFPEPTMSWTKDGEQIEQEEDD 260 Query: 191 SRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGI 250 + + S D LTI +V D+ Y C+ EN + + + + V+ + + + + + Sbjct: 261 EKYIFSDDSSQLTIKKVDKNDEAEYICIAENKAGE-QDATIHLKVFAKPKITYVENQTAM 319 Query: 251 FLLVTLVTVCAC---------WKPSKRKQKKLEK 275 L + C W+ S R EK Sbjct: 320 ELEEQVTLTCEASGDPIPSITWRTSTRNISSEEK 353 Score = 36.6 bits (83), Expect = 0.043 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%) Query: 103 ENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVL-VASTTVLELS 161 ++ L + + DE Y I I ++ GE+ + + V ++P++ V + T +EL Sbjct: 268 DSSQLTIKKVDKNDEAEY---ICIAENK-AGEQDATIHLKV-FAKPKITYVENQTAMELE 322 Query: 162 EAFTLNCSHENGTKPSYTWLKDGKPLLN-----DSRMLLSPDQKV--LTITRVLMEDDDL 214 E TL C PS TW + + + D M++ +V LT+ + D Sbjct: 323 EQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGE 382 Query: 215 YSCMVENPISQ 225 Y C N I Q Sbjct: 383 YICTASNTIGQ 393 >gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sapiens] Length = 858 Score = 59.7 bits (143), Expect = 5e-09 Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%) Query: 76 PVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEK 135 P + + G +VI L+ D R + N L + ++ DEGTY E I K Sbjct: 147 PTIIWKHKGRDVI--LKKDVR--FIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFK 202 Query: 136 TINLTVDVP--ISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLL---ND 190 I + V+VP I Q +V +T L ++ TL C E +P+ +W KDG+ + +D Sbjct: 203 DIQVIVNVPPTIQARQNIVNATA--NLGQSVTLVCDAEGFPEPTMSWTKDGEQIEQEEDD 260 Query: 191 SRMLLSPDQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRSSLYIILSTGGI 250 + + S D LTI +V D+ Y C+ EN + + + + V+ + + + + + Sbjct: 261 EKYIFSDDSSQLTIKKVDKNDEAEYICIAENKAGE-QDATIHLKVFAKPKITYVENQTAM 319 Query: 251 FLLVTLVTVCAC---------WKPSKRKQKKLEK 275 L + C W+ S R EK Sbjct: 320 ELEEQVTLTCEASGDPIPSITWRTSTRNISSEEK 353 Score = 32.7 bits (73), Expect = 0.62 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 23/141 (16%) Query: 103 ENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVL-VASTTVLELS 161 ++ L + + DE Y I I ++ GE+ + + V ++P++ V + T +EL Sbjct: 268 DSSQLTIKKVDKNDEAEY---ICIAENK-AGEQDATIHLKV-FAKPKITYVENQTAMELE 322 Query: 162 EAFTLNCSHENGTKPSYTWLKDGKPLLN---------------DSRMLLSPDQKV--LTI 204 E TL C PS TW + + + D M++ +V LT+ Sbjct: 323 EQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARVSSLTL 382 Query: 205 TRVLMEDDDLYSCMVENPISQ 225 + D Y C N I Q Sbjct: 383 KSIQYTDAGEYICTASNTIGQ 403 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,591,537 Number of Sequences: 37866 Number of extensions: 998871 Number of successful extensions: 9905 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 233 Number of HSP's successfully gapped in prelim test: 876 Number of HSP's that attempted gapping in prelim test: 6761 Number of HSP's gapped (non-prelim): 3599 length of query: 416 length of database: 18,247,518 effective HSP length: 105 effective length of query: 311 effective length of database: 14,271,588 effective search space: 4438463868 effective search space used: 4438463868 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.