CLCN5 10404

Name: CLCN5	Sequence: fasta or formatted (816aa)		NCBI GI: 189217921
Description: chloride channel 5 isoform a		Referenced in: Chloride Channels Kidney
Other entries for this name: alt mRNA [816aa] chloride channel 5 isoform a alt prot [746aa] chloride channel 5 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 58 5 C cysteine 2.1 17 3 D aspartate 4.8 39 2 E glutamate 5.4 44 2 F phenylalanine 5.6 46 2 G glycine 7.8 64 3 H histidine 2.0 16 1 I isoleucine 7.1 58 2 K lysine 4.0 33 2 L leucine 10.9 89 2 M methionine 3.1 25 1 N asparagine 3.4 28 1 P proline 4.3 35 2 Q glutamine 2.0 16 2 R arginine 4.7 38 2 S serine 7.4 60 3 T threonine 6.0 49 2 V valine 7.1 58 3 W tryptophan 2.3 19 1 Y tyrosine 2.9 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chloride channel 5 isoform a CLCN5 1.000 chloride channel 5 isoform a CLCN5 0.913 chloride channel 5 isoform b CLCN3 0.753 chloride channel 3 isoform b CLCN4 0.743 chloride channel 4 CLCN3 0.737 chloride channel 3 isoform e CLCN7 0.145 chloride channel 7 isoform b CLCN7 0.145 chloride channel 7 isoform a CLCN2 0.122 chloride channel 2 CLCN6 0.120 chloride channel 6 isoform ClC-6a CLCN1 0.113 chloride channel 1, skeletal muscle CLCNKA 0.099 chloride channel Ka isoform 1 CLCNKA 0.099 chloride channel Ka isoform 2 CLCNKB 0.099 chloride channel Kb CLCN6 0.051 chloride channel 6 isoform ClC-6c CLCN6 0.022 chloride channel 6 isoform ClC-6d CLCN6 0.022 chloride channel 6 isoform ClC-6b RBM6 0.006 RNA binding motif protein 6 TSPAN3 0.004 transmembrane 4 superfamily member 8 isoform 2 [Homo... TSPAN3 0.004 transmembrane 4 superfamily member 8 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.