EDF1 23943

Name: EDF1	Sequence: fasta or formatted (139aa)		NCBI GI: 24497601
Description: endothelial differentiation-related factor 1 isoform beta		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [148aa] endothelial differentiation-related factor 1 isoform alpha
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 14 2 C cysteine 0.7 1 1 D aspartate 5.0 7 1 E glutamate 7.9 11 2 F phenylalanine 0.0 0 0 G glycine 6.5 9 1 H histidine 2.2 3 2 I isoleucine 5.8 8 1 K lysine 10.8 15 2 L leucine 6.5 9 1 M methionine 0.7 1 1 N asparagine 3.6 5 2 P proline 2.9 4 1 Q glutamine 7.9 11 2 R arginine 7.9 11 2 S serine 5.0 7 1 T threonine 7.9 11 1 V valine 6.5 9 1 W tryptophan 1.4 2 1 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 endothelial differentiation-related factor 1 isoform... EDF1 0.920 endothelial differentiation-related factor 1 isoform ... KIF5B 0.028 kinesin family member 5B KIF20A 0.020 kinesin family member 20A LOC643677 0.016 hypothetical protein LOC643677 LOC643677 0.016 PREDICTED: hypothetical protein LOC643677 LOC643677 0.016 PREDICTED: hypothetical protein LOC643677 LOC643677 0.016 PREDICTED: hypothetical protein LOC643677 ABCB9 0.016 ATP-binding cassette, sub-family B (MDR/TAP), member ... ABCB9 0.016 ATP-binding cassette, sub-family B (MDR/TAP), member ... ABCB9 0.016 ATP-binding cassette, sub-family B (MDR/TAP), member... CCDC22 0.016 coiled-coil domain containing 22 KRT71 0.012 keratin 71 AP3B1 0.012 adaptor-related protein complex 3, beta 1 subunit [H... RAD50 0.012 RAD50 homolog isoform 2 RAD50 0.012 RAD50 homolog isoform 1 MED10 0.012 mediator complex subunit 10 HIVEP1 0.012 human immunodeficiency virus type I enhancer bindin... SLMAP 0.012 sarcolemma associated protein DEK 0.012 DEK oncogene isoform 2 DEK 0.012 DEK oncogene isoform 1 VPS25 0.012 vacuolar protein sorting 25 KRT73 0.008 keratin 73 PSIP1 0.008 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.008 PC4 and SFRS1 interacting protein 1 isoform 2 HSD17B8 0.008 estradiol 17 beta-dehydrogenase 8 HOOK1 0.008 hook homolog 1 CENPF 0.008 centromere protein F ARGLU1 0.008 arginine and glutamate rich 1 BMS1 0.008 BMS1-like, ribosome assembly protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.