EDF1 28581

Name: EDF1	Sequence: fasta or formatted (148aa)		NCBI GI: 4503453
Description: endothelial differentiation-related factor 1 isoform alpha		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [139aa] endothelial differentiation-related factor 1 isoform beta
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 15 2 C cysteine 0.0 0 0 D aspartate 5.4 8 1 E glutamate 7.4 11 2 F phenylalanine 0.0 0 0 G glycine 8.1 12 1 H histidine 2.0 3 2 I isoleucine 6.8 10 1 K lysine 13.5 20 2 L leucine 6.8 10 1 M methionine 0.7 1 1 N asparagine 3.4 5 2 P proline 3.4 5 1 Q glutamine 7.4 11 2 R arginine 6.8 10 2 S serine 4.1 6 1 T threonine 6.8 10 1 V valine 5.4 8 1 W tryptophan 1.4 2 1 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 endothelial differentiation-related factor 1 isoform ... EDF1 0.858 endothelial differentiation-related factor 1 isoform... KIF5B 0.026 kinesin family member 5B LOC643677 0.015 hypothetical protein LOC643677 KRT71 0.015 keratin 71 LOC643677 0.015 PREDICTED: hypothetical protein LOC643677 LOC643677 0.015 PREDICTED: hypothetical protein LOC643677 LOC643677 0.015 PREDICTED: hypothetical protein LOC643677 ABCB9 0.015 ATP-binding cassette, sub-family B (MDR/TAP), member ... ABCB9 0.015 ATP-binding cassette, sub-family B (MDR/TAP), member ... ABCB9 0.015 ATP-binding cassette, sub-family B (MDR/TAP), member... CCDC22 0.015 coiled-coil domain containing 22 RAD50 0.011 RAD50 homolog isoform 2 RAD50 0.011 RAD50 homolog isoform 1 MED10 0.011 mediator complex subunit 10 KRT73 0.011 keratin 73 ACSL3 0.011 acyl-CoA synthetase long-chain family member 3 [Homo... ACSL3 0.011 acyl-CoA synthetase long-chain family member 3 [Homo... PRPF4B 0.011 serine/threonine-protein kinase PRP4K SLMAP 0.011 sarcolemma associated protein AP3B1 0.011 adaptor-related protein complex 3, beta 1 subunit [H... DEK 0.011 DEK oncogene isoform 2 DEK 0.011 DEK oncogene isoform 1 VPS25 0.011 vacuolar protein sorting 25 PSIP1 0.007 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.007 PC4 and SFRS1 interacting protein 1 isoform 2 HSD17B8 0.007 estradiol 17 beta-dehydrogenase 8 HOOK1 0.007 hook homolog 1 CENPF 0.007 centromere protein F ARGLU1 0.007 arginine and glutamate rich 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.