Guide to the Human Genome
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Name: NUDT16 Sequence: fasta or formatted (162aa) NCBI GI: 24308370
Description:

nudix-type motif 16

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         14           4
 C cysteine            0.0          0           0
 D aspartate           4.9          8           1
 E glutamate           8.0         13           2
 F phenylalanine       4.9          8           1
 G glycine            11.7         19           2
 H histidine           3.1          5           2
 I isoleucine          3.1          5           1
 K lysine              1.9          3           1
 L leucine            16.0         26           2
 M methionine          1.9          3           1
 N asparagine          1.2          2           1
 P proline             3.7          6           1
 Q glutamine           3.1          5           1
 R arginine            9.9         16           1
 S serine              5.6          9           2
 T threonine           3.7          6           1
 V valine              6.2         10           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 16 
NUDT16L1              0.500   syndesmos 
NUDT8                 0.017   nudix-type motif 8 
PCF11                 0.010   pre-mRNA cleavage complex II protein Pcf11 
LOC729774             0.010   PREDICTED: hypothetical protein, partial 
LOC729774             0.010   PREDICTED: hypothetical protein 
CHD9                  0.010   chromodomain helicase DNA binding protein 9 
GRID2IP               0.007   glutamate receptor, ionotropic, delta 2 (Grid2) int...
ZGPAT                 0.007   zinc finger, CCCH-type with G patch domain isoform ...
ZGPAT                 0.007   zinc finger, CCCH-type with G patch domain isoform ...
ZGPAT                 0.007   zinc finger, CCCH-type with G patch domain isoform ...
CDH23                 0.007   cadherin-like 23 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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