TFEB 23693

Name: TFEB	Sequence: fasta or formatted (476aa)		NCBI GI: 24307933
Description: transcription factor EB		Referenced in: Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 31 2 C cysteine 0.2 1 1 D aspartate 4.8 23 2 E glutamate 7.1 34 2 F phenylalanine 1.7 8 1 G glycine 5.5 26 2 H histidine 3.2 15 2 I isoleucine 2.9 14 1 K lysine 4.0 19 2 L leucine 11.1 53 2 M methionine 4.4 21 1 N asparagine 4.0 19 1 P proline 10.5 50 3 Q glutamine 8.2 39 10 R arginine 5.9 28 4 S serine 10.1 48 3 T threonine 3.2 15 2 V valine 4.4 21 2 W tryptophan 0.4 2 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor EB MITF 0.357 microphthalmia-associated transcription factor isofo... MITF 0.357 microphthalmia-associated transcription factor isofo... MITF 0.357 microphthalmia-associated transcription factor isofo... MITF 0.357 microphthalmia-associated transcription factor isofo... TFE3 0.344 transcription factor E3 MITF 0.305 microphthalmia-associated transcription factor isofo... MITF 0.299 microphthalmia-associated transcription factor isofor... TFEC 0.242 transcription factor EC isoform a TFEC 0.228 transcription factor EC isoform b USF2 0.037 upstream stimulatory factor 2 isoform 2 USF2 0.037 upstream stimulatory factor 2 isoform 1 MAML2 0.030 mastermind-like 2 SREBF2 0.028 sterol regulatory element-binding transcription fact... MED12 0.026 mediator complex subunit 12 MNT 0.025 MAX binding protein SREBF1 0.025 sterol regulatory element binding transcription fact... SREBF1 0.025 sterol regulatory element binding transcription fact... USF1 0.025 upstream stimulatory factor 1 isoform 1 USF1 0.025 upstream stimulatory factor 1 isoform 2 NCOA3 0.024 nuclear receptor coactivator 3 isoform a NCOA3 0.024 nuclear receptor coactivator 3 isoform b ATXN1 0.024 ataxin 1 ATXN1 0.024 ataxin 1 TOX3 0.024 TOX high mobility group box family member 3 isoform... TOX3 0.024 TOX high mobility group box family member 3 isoform... FOXP2 0.023 forkhead box P2 isoform I FOXP2 0.023 forkhead box P2 isoform III FOXP2 0.023 forkhead box P2 isoform II MED15 0.022 mediator complex subunit 15 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.