Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239787919
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239787919 low density lipoprotein receptor-related protein
11 [Homo sapiens]
(500 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239787919 low density lipoprotein receptor-related protein 11... 1014 0.0
gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... 110 2e-24
gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... 110 2e-24
gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... 106 4e-23
gi|33359221 dyslexia susceptibility 2-like [Homo sapiens] 89 1e-17
gi|134304840 KIAA0319 [Homo sapiens] 78 2e-14
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 46 9e-05
gi|61744471 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|61744467 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|66082554 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|65301119 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|65301164 very low density lipoprotein receptor isoform b [Hom... 45 2e-04
gi|65301167 very low density lipoprotein receptor isoform a [Hom... 45 2e-04
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 44 3e-04
gi|4507157 sortilin-related receptor containing LDLR class A rep... 44 3e-04
gi|157384998 low density lipoprotein receptor-related protein 4 ... 44 3e-04
gi|28557796 low density lipoprotein receptor class A domain cont... 44 3e-04
gi|134031945 SCO-spondin [Homo sapiens] 44 4e-04
gi|223942069 enterokinase precursor [Homo sapiens] 42 0.001
gi|4504975 low density lipoprotein receptor precursor [Homo sapi... 42 0.001
gi|93102379 low density lipoprotein-related protein 1B precursor... 42 0.002
gi|119709832 low density lipoprotein receptor-related protein 5 ... 41 0.002
gi|208973262 low density lipoprotein-related protein 12 isoform ... 41 0.002
gi|7305525 low density lipoprotein-related protein 12 isoform a ... 41 0.002
gi|222831592 transmembrane protease, serine 7 [Homo sapiens] 40 0.005
gi|32490559 low density lipoprotein receptor-related protein 10 ... 40 0.005
gi|148727288 low density lipoprotein receptor-related protein 6 ... 39 0.008
gi|29244926 corin [Homo sapiens] 39 0.011
gi|167555125 low density lipoprotein receptor-related protein 3 ... 39 0.014
gi|227499990 transmembrane protease, serine 2 isoform 1 [Homo sa... 38 0.025
>gi|239787919 low density lipoprotein receptor-related protein 11
[Homo sapiens]
Length = 500
Score = 1014 bits (2623), Expect = 0.0
Identities = 500/500 (100%), Positives = 500/500 (100%)
Query: 1 MASVAQESAGSQRRLPPRHGALRGLLLLCLWLPSGRAALPPAAPLSELHAQLSGVEQLLE 60
MASVAQESAGSQRRLPPRHGALRGLLLLCLWLPSGRAALPPAAPLSELHAQLSGVEQLLE
Sbjct: 1 MASVAQESAGSQRRLPPRHGALRGLLLLCLWLPSGRAALPPAAPLSELHAQLSGVEQLLE 60
Query: 61 EFRRQLQQERPQEELELELRAGGGPQEDCPGPGSGGYSAMPDAIIRTKDSLAAGASFLRA 120
EFRRQLQQERPQEELELELRAGGGPQEDCPGPGSGGYSAMPDAIIRTKDSLAAGASFLRA
Sbjct: 61 EFRRQLQQERPQEELELELRAGGGPQEDCPGPGSGGYSAMPDAIIRTKDSLAAGASFLRA 120
Query: 121 PAAVRGWRQCVAACCSEPRCSVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSG 180
PAAVRGWRQCVAACCSEPRCSVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSG
Sbjct: 121 PAAVRGWRQCVAACCSEPRCSVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSG 180
Query: 181 YSSYSLSRAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAI 240
YSSYSLSRAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAI
Sbjct: 181 YSSYSLSRAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAI 240
Query: 241 VQYEWALLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRAA 300
VQYEWALLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRAA
Sbjct: 241 VQYEWALLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRAA 300
Query: 301 YSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAAS 360
YSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAAS
Sbjct: 301 YSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAAS 360
Query: 361 PALPRTTGPSEDAGGDSLVEKSQKATAPNKPPALSNTEKRNHSAFWGPESQIIPVMPDSS 420
PALPRTTGPSEDAGGDSLVEKSQKATAPNKPPALSNTEKRNHSAFWGPESQIIPVMPDSS
Sbjct: 361 PALPRTTGPSEDAGGDSLVEKSQKATAPNKPPALSNTEKRNHSAFWGPESQIIPVMPDSS 420
Query: 421 SSGKNRKEESYIFESKGDGGGGEHPAPETGAVLPLALGLAITALLLLMVACRLRLVKQKL 480
SSGKNRKEESYIFESKGDGGGGEHPAPETGAVLPLALGLAITALLLLMVACRLRLVKQKL
Sbjct: 421 SSGKNRKEESYIFESKGDGGGGEHPAPETGAVLPLALGLAITALLLLMVACRLRLVKQKL 480
Query: 481 KKARPITSEESDYLINGMYL 500
KKARPITSEESDYLINGMYL
Sbjct: 481 KKARPITSEESDYLINGMYL 500
>gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 110 bits (276), Expect = 2e-24
Identities = 98/335 (29%), Positives = 136/335 (40%), Gaps = 89/335 (26%)
Query: 84 GPQEDCPGPGSGG------YSAMPDAIIRTKDSLAAGASFLRAPAAVRGWRQCVAACCSE 137
GP PG +G + +P ++ T S++ GA+FL +P RGW CV ACC+
Sbjct: 36 GPPPAPPGLPAGADCLNSFTAGVPGFVLDTNASVSNGATFLESPTVRRGW-DCVRACCTT 94
Query: 138 PRCSVAVVEL-PRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLSRAPDGAALA 196
C++A+VEL P R A+ C+L NC VCKFA G+ +Y L+R
Sbjct: 95 QNCNLALVELQPDRGED--AIAACFLINCLYEQNFVCKFAPREGFINY-LTRE----VYR 147
Query: 197 TARASPRQEKDAPPLSKAGQDVVLHL-PTDGVVLDGRESTDDHAIVQYEWALLQGDPSVD 255
+ R Q + KA + L + P + +VL E+TD W LL+GD V
Sbjct: 148 SYRQLRTQGFGGSGIPKAWAGIDLKVQPQEPLVLKDVENTD--------WRLLRGDTDVR 199
Query: 256 MKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRA---------------- 299
++ ++L L+EGTY FQLTVT + + NV+VTVL
Sbjct: 200 VERKDPNQVELWGLKEGTYLFQLTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRC 259
Query: 300 -----------------AYSTGGCLHTCSRY---------------------HFFCDDGC 321
++ GGCL + Y H C C
Sbjct: 260 RGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGVQGPSMERRHPVCSGTC 319
Query: 322 -----------CIDITLACDGVQQCPDGSDEDFCQ 345
CID L CD CPD SDE C+
Sbjct: 320 QPTQFRCSNGCCIDSFLECDDTPNCPDASDEAACE 354
>gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 110 bits (276), Expect = 2e-24
Identities = 98/335 (29%), Positives = 136/335 (40%), Gaps = 89/335 (26%)
Query: 84 GPQEDCPGPGSGG------YSAMPDAIIRTKDSLAAGASFLRAPAAVRGWRQCVAACCSE 137
GP PG +G + +P ++ T S++ GA+FL +P RGW CV ACC+
Sbjct: 36 GPPPAPPGLPAGADCLNSFTAGVPGFVLDTNASVSNGATFLESPTVRRGW-DCVRACCTT 94
Query: 138 PRCSVAVVEL-PRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLSRAPDGAALA 196
C++A+VEL P R A+ C+L NC VCKFA G+ +Y L+R
Sbjct: 95 QNCNLALVELQPDRGED--AIAACFLINCLYEQNFVCKFAPREGFINY-LTRE----VYR 147
Query: 197 TARASPRQEKDAPPLSKAGQDVVLHL-PTDGVVLDGRESTDDHAIVQYEWALLQGDPSVD 255
+ R Q + KA + L + P + +VL E+TD W LL+GD V
Sbjct: 148 SYRQLRTQGFGGSGIPKAWAGIDLKVQPQEPLVLKDVENTD--------WRLLRGDTDVR 199
Query: 256 MKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRA---------------- 299
++ ++L L+EGTY FQLTVT + + NV+VTVL
Sbjct: 200 VERKDPNQVELWGLKEGTYLFQLTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRC 259
Query: 300 -----------------AYSTGGCLHTCSRY---------------------HFFCDDGC 321
++ GGCL + Y H C C
Sbjct: 260 RGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGVQGPSMERRHPVCSGTC 319
Query: 322 -----------CIDITLACDGVQQCPDGSDEDFCQ 345
CID L CD CPD SDE C+
Sbjct: 320 QPTQFRCSNGCCIDSFLECDDTPNCPDASDEAACE 354
>gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1
precursor [Homo sapiens]
Length = 529
Score = 106 bits (265), Expect = 4e-23
Identities = 95/308 (30%), Positives = 139/308 (45%), Gaps = 55/308 (17%)
Query: 84 GPQEDCPGPGSGG------YSAMPDAIIRTKDSLAAGASFLRAPAAVRGWRQCVAACCSE 137
GP PG +G + +P ++ T S++ GA+FL +P RGW CV ACC+
Sbjct: 36 GPPPAPPGLPAGADCLNSFTAGVPGFVLDTNASVSNGATFLESPTVRRGW-DCVRACCTT 94
Query: 138 PRCSVAVVEL-PRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLSRAPDGAALA 196
C++A+VEL P R A+ C+L NC VCKFA G+ +Y L+R
Sbjct: 95 QNCNLALVELQPDRGED--AIAACFLINCLYEQNFVCKFAPREGFINY-LTRE----VYR 147
Query: 197 TARASPRQEKDAPPLSKAGQDVVLHL-PTDGVVLDGRESTDDHAIVQYEWALLQGDPSVD 255
+ R Q + KA + L + P + +VL E+TD W LL+GD V
Sbjct: 148 SYRQLRTQGFGGSGIPKAWAGIDLKVQPQEPLVLKDVENTD--------WRLLRGDTDVR 199
Query: 256 MKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLR---------AAYSTGGC 306
++ ++L L+EGTY FQLTVT + + NV+VTVL A+ G C
Sbjct: 200 VERKDPNQVELWGLKEGTYLFQLTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRC 259
Query: 307 LHTCSRYHF---------FCDDGCC---------IDITLACDGVQQCP----DGSDEDFC 344
+ R+++ F GC + LAC GVQ P G+ F
Sbjct: 260 RGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGVQGGPLRGSSGAQATFP 319
Query: 345 QNLGLDRK 352
Q ++R+
Sbjct: 320 QGPSMERR 327
Score = 50.1 bits (118), Expect = 5e-06
Identities = 20/40 (50%), Positives = 22/40 (55%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
C TC F C +GCCID L CD CPD SDE C+
Sbjct: 331 CSGTCQPTQFRCSNGCCIDSFLECDDTPNCPDASDEAACE 370
>gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]
Length = 1049
Score = 88.6 bits (218), Expect = 1e-17
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 191 DGAALAT-ARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQ 249
DGA +T A + + D PP++ AG + V+ LP + + L G +STDDH I YEW+L
Sbjct: 483 DGATNSTTANLTVNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSP 542
Query: 250 GDPS--VDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTV 296
V+M+ ++ TL+LS +QEG YT+QLTVTDT GQ+++ V+V V
Sbjct: 543 SSKGKVVEMQGVRTPTLQLSAMQEGDYTYQLTVTDTIGQQATAQVTVIV 591
Score = 74.3 bits (181), Expect = 2e-13
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 176 ALHSGYSSYSLSRAPDGAALATARASP--RQEKDAPPLSKAGQDVVLHLPTDGVVLDGRE 233
A+ G +Y L+ ATA+ + + E + PP + AG D L LP D LDG +
Sbjct: 563 AMQEGDYTYQLTVTDTIGQQATAQVTVIVQPENNKPPQADAGPDKELTLPVDSTTLDGSK 622
Query: 234 STDDHAIVQYEWALLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVS 293
S+DD I+ Y W QG V ++ S ++ LQ GTY F LTV D +S +V+
Sbjct: 623 SSDDQKIISYLWEKTQGPDGVQLENANSSVATVTGLQVGTYVFTLTVKDERNLQSQSSVN 682
Query: 294 VTV 296
V V
Sbjct: 683 VIV 685
Score = 72.4 bits (176), Expect = 9e-13
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 203 RQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQGDPSVDMKVPQSG 262
++E + PP++K +VV+ LPT LDG +S+DD IV Y W +G P+ + S
Sbjct: 686 KEEINKPPIAKITGNVVITLPTSTAELDGSKSSDDKGIVSYLWTRDEGSPAAGEVLNHSD 745
Query: 263 ---TLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTV 296
L LS+L EGTYTF L VTD G+ +D +V V
Sbjct: 746 HHPILFLSNLVEGTYTFHLKVTDAKGESDTDRTTVEV 782
Score = 72.0 bits (175), Expect = 1e-12
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 192 GAALATARASPRQEKDAPPLSKAG-QDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQG 250
G P K+ PP++ Q + LPT V+DG +STDD IVQY W L+G
Sbjct: 390 GEGYVNVTVKPEPRKNRPPIAIVSPQFQEISLPTTSTVIDGSQSTDDDKIVQYHWEELKG 449
Query: 251 DPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRA 299
+ + LKLS L G YTF LTV D+ G +S ++TV +A
Sbjct: 450 PLREEKISEDTAILKLSKLVPGNYTFSLTVVDSDGATNSTTANLTVNKA 498
Score = 30.4 bits (67), Expect = 3.9
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 214 AGQDVVLHLPTDGVVLDGR--ESTDDHAIVQYEWALLQG--DPSVDMKVPQSGTLKLSHL 269
AG+ V + LP + V L+ + Y+W L+ D S +M+ S LKLS L
Sbjct: 313 AGESVQITLPKNEVQLNAYVLQEPPKGETYTYDWQLITHPRDYSGEMEGKHSQILKLSKL 372
Query: 270 QEGTYTFQLTVTDTAGQRSSDNVSVTV 296
G Y F++ + + V+VTV
Sbjct: 373 TPGLYEFKV-IVEGQNAHGEGYVNVTV 398
>gi|134304840 KIAA0319 [Homo sapiens]
Length = 1072
Score = 78.2 bits (191), Expect = 2e-14
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 191 DGAALATARAS-PRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQ 249
DGA +T A D PP++ AG + + LP + + L+G +S+DDH IV YEW+L
Sbjct: 509 DGATNSTTAALIVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGP 568
Query: 250 GDPS--VDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTV 296
G V M+ Q+ L LS +QEG YTFQL VTD++ Q+S+ V+V V
Sbjct: 569 GSEGKHVVMQGVQTPYLHLSAMQEGDYTFQLKVTDSSRQQSTAVVTVIV 617
Score = 72.0 bits (175), Expect = 1e-12
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 187 SRAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWA 246
S A+ T P E + PP++ AG D L P + LDG S+DDH IV Y W
Sbjct: 604 SSRQQSTAVVTVIVQP--ENNRPPVAVAGPDKELIFPVESATLDGSSSSDDHGIVFYHWE 661
Query: 247 LLQGDPSVDMKVPQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTV 296
++G +V+M+ ++ LQ GTY F+LTV D G S+ ++V V
Sbjct: 662 HVRGPSAVEMENIDKAIATVTGLQVGTYHFRLTVKDQQGLSSTSTLTVAV 711
Score = 69.7 bits (169), Expect = 6e-12
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 193 AALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWALLQGDP 252
++ +T + ++E ++PP ++AG VL LP + + LDG STDD IV Y W P
Sbjct: 702 SSTSTLTVAVKKENNSPPRARAGGRHVLVLPNNSITLDGSRSTDDQRIVSYLWIRDGQSP 761
Query: 253 SVDMKV---PQSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTV 296
+ + S L+L++L EG YTF L VTD+ G +D +V V
Sbjct: 762 AAGDVIDGSDHSVALQLTNLVEGVYTFHLRVTDSQGASDTDTATVEV 808
Score = 62.4 bits (150), Expect = 9e-10
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 192 GAALATARASPRQEKDAPPLSKAGQDVV-LHLPTDGVVLDGRESTDDHAIVQYEWALLQG 250
G P + + PP++ + L LP ++DG +STDD IV Y W + G
Sbjct: 416 GEGFVNVTVKPARRVNLPPVAVVSPQLQELTLPLTSALIDGSQSTDDTEIVSYHWEEING 475
Query: 251 DPSVDMKVP-QSGTLKLSHLQEGTYTFQLTVTDTAGQRSSDNVSVTVLRA 299
P ++ K S L+LS+L G Y+F+LTVTD+ G +S ++ V A
Sbjct: 476 -PFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSDGATNSTTAALIVNNA 524
>gi|126012573 low density lipoprotein-related protein 2 [Homo
sapiens]
Length = 4655
Score = 45.8 bits (107), Expect = 9e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
TCS + C +G CI CD V+ CPDG+DE+ CQ
Sbjct: 107 TCSSHQITCSNGQCIPSEYRCDHVRDCPDGADENDCQ 143
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
TC Y F C G CI CDG C D DED C++
Sbjct: 221 TCGGYQFTCPSGRCIYQNWVCDGEDDCKDNGDEDGCES 258
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 30/104 (28%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAASPALPRTTG 368
TC F C + CID++ CDG + C DGSDE C L T
Sbjct: 1148 TCQPSQFNCPNHRCIDLSFVCDGDKDCVDGSDEVGC-----------------VLNCTAS 1190
Query: 369 PSEDAGGDSLV-------------EKSQKATAPNKPPALSNTEK 399
+ A GD + + S +A P +PP + ++++
Sbjct: 1191 QFKCASGDKCIGVTNRCDGVFDCSDNSDEAGCPTRPPGMCHSDE 1234
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
LHTCS F C +G C+ + CD C DGSDE C
Sbjct: 2738 LHTCSPTAFTCANGRCVQYSYRCDYYNDCGDGSDEAGC 2775
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 305 GCLH-TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
GCL+ TC + F C +G CI T CD C DGSDE
Sbjct: 3026 GCLYQTCQQNQFTCQNGRCISKTFVCDEDNDCGDGSDE 3063
Score = 39.7 bits (91), Expect = 0.006
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNL 347
C + F C +G C+ CDGV C D SDE C L
Sbjct: 1026 CGLFSFPCKNGRCVPNYYLCDGVDDCHDNSDEQLCGTL 1063
Score = 39.7 bits (91), Expect = 0.006
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDED--FCQN 346
C F C DG C C+ Q CPDGSDED C+N
Sbjct: 3553 CRLGQFQCSDGNCTSPQTLCNAHQNCPDGSDEDRLLCEN 3591
Score = 38.9 bits (89), Expect = 0.011
Identities = 22/48 (45%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 302 STGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDED---FCQN 346
S G TC F CD G CI CDG C D SDED CQN
Sbjct: 2898 SCGHSERTCLADEFKCDGGRCIPSEWICDGDNDCGDMSDEDKRHQCQN 2945
Score = 38.5 bits (88), Expect = 0.014
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TC + F CD+G CI++ C+ + C D SDE C
Sbjct: 3074 TCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEKGC 3109
Score = 38.1 bits (87), Expect = 0.019
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+ TC +F C G C+ L CDG C D SDE C
Sbjct: 3795 MRTCHPEYFQCTSGHCVHSELKCDGSADCLDASDEADC 3832
Score = 37.7 bits (86), Expect = 0.025
Identities = 16/39 (41%), Positives = 17/39 (43%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C C F C +G CI CD C DGSDE C
Sbjct: 179 CTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHAC 217
Score = 37.4 bits (85), Expect = 0.032
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C HF C G CI CDG + C D +DE C
Sbjct: 28 CDSAHFRCGSGHCIPADWRCDGTKDCSDDADEIGC 62
Score = 37.0 bits (84), Expect = 0.042
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 306 CLHTCSRYHFFC-DDGCCIDITLACDGVQQCPDGSDE 341
C+ CS F C ++ CI I CDG + C DGSDE
Sbjct: 3508 CMPMCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDE 3544
Score = 36.2 bits (82), Expect = 0.071
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+TCS F C G CI CD C DGSDE C
Sbjct: 1065 NTCSSSAFTCGHGECIPAHWRCDKRNDCVDGSDEHNC 1101
Score = 36.2 bits (82), Expect = 0.071
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TC +F CD+G CI CD C D SDE C
Sbjct: 1270 TCPSSYFHCDNGNCIHRAWLCDRDNDCGDMSDEKDC 1305
Score = 35.0 bits (79), Expect = 0.16
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDR 351
C+ Y + C +G CI CD C D SDE C N G +R
Sbjct: 3928 CTEYEYKCGNGHCIPHDNVCDDADDCGDWSDELGC-NKGKER 3968
Score = 34.7 bits (78), Expect = 0.21
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 305 GC-LHTCSRYHFFCD-DGCCIDITLACDGVQQCPDGSDE 341
GC + TC + +F C +G CI + CD Q C DGSDE
Sbjct: 61 GCAVVTCQQGYFKCQSEGQCIPNSWVCDQDQDCDDGSDE 99
Score = 34.7 bits (78), Expect = 0.21
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 307 LHTCSRYHFFC-DDGCCIDITLACDGVQQCPDGSDED 342
+H CS + C + G CI I CDG+ CP DE+
Sbjct: 263 VHKCSPREWSCPESGRCISIYKVCDGILDCPGREDEN 299
Score = 33.9 bits (76), Expect = 0.35
Identities = 16/36 (44%), Positives = 16/36 (44%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TCS F C G CI CD C D SDE C
Sbjct: 2992 TCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGC 3027
Score = 33.5 bits (75), Expect = 0.46
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
HTCS F C G CI CD C D SDE
Sbjct: 2862 HTCSSSEFQCASGRCIPQHWYCDQETDCFDASDE 2895
Score = 33.1 bits (74), Expect = 0.60
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
+C + CD+ CI CD C DGSDE C +
Sbjct: 1108 SCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCNS 1145
Score = 33.1 bits (74), Expect = 0.60
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 310 CSRYHFFC-DDGCCIDITLACDGVQQCPDGSDE 341
C + + C C+++++ CDG+ CP+G+DE
Sbjct: 1312 CPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDE 1344
Score = 33.1 bits (74), Expect = 0.60
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C F C +G CI CD C DGSDE
Sbjct: 2700 CGASSFTCSNGRCISEEWKCDNDNDCGDGSDE 2731
Score = 32.7 bits (73), Expect = 0.79
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 307 LHTC------SRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
LH C S F CD+ CI C+GV C DG+DE
Sbjct: 3875 LHLCLDVPCNSPNRFRCDNNRCIYSHEVCNGVDDCGDGTDE 3915
Score = 32.3 bits (72), Expect = 1.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
F C + CI + CDG C D SDE+ C
Sbjct: 3725 FRCKNHHCIPLRWQCDGQNDCGDNSDEENC 3754
Score = 32.0 bits (71), Expect = 1.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDED 342
C F C + CI CDG C DGSDE+
Sbjct: 3842 CQATMFECKNHVCIPPYWKCDGDDDCGDGSDEE 3874
Score = 31.6 bits (70), Expect = 1.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 317 CDDGCCIDITLACDGVQQCPDGSDEDFCQNLGL 349
CD+G C + + CD C D SDE C + L
Sbjct: 152 CDNGACYNTSQKCDWKVDCRDSSDEINCTEICL 184
Score = 30.4 bits (67), Expect = 3.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDED 342
H C + C + CI + CD C D SDED
Sbjct: 3592 HHCDSNEWQCANKRCIPESWQCDTFNDCEDNSDED 3626
Score = 30.0 bits (66), Expect = 5.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 308 HTCSRY-HFFCDDGC-CIDITLACDGVQQCPDGSDEDFCQ 345
H C + F C CI C+GV C D SDE C+
Sbjct: 3676 HLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDEQGCE 3715
Score = 29.6 bits (65), Expect = 6.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
C+ F C + CI CD C D SDE C+
Sbjct: 3759 CTESEFRCVNQQCIPSRWICDHYNDCGDNSDERDCE 3794
>gi|61744471 low density lipoprotein receptor-related protein 8
isoform 1 precursor [Homo sapiens]
Length = 963
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F CD+G CI CDG ++CPDGSDE
Sbjct: 85 TCADSDFTCDNGHCIHERWKCDGEEECPDGSDE 117
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 305 GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAASPAL- 363
GC C+ + F C + C+ CDG C DGSDE C A PA
Sbjct: 162 GCATLCAPHEFQCGNRSCLAAVFVCDGDDDCGDGSDERGC--------------ADPACG 207
Query: 364 PRTTGPSEDAGGDSLVEK 381
PR D GG + E+
Sbjct: 208 PREFRCGGDGGGACIPER 225
Score = 40.0 bits (92), Expect = 0.005
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
L TC F C DG C+ C+ Q CPDGSDE C
Sbjct: 296 LGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDGSDEAGC 333
Score = 32.0 bits (71), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
F C G C+ + CDG + C D SDE C
Sbjct: 265 FACRSGECVHLGWRCDGDRDCKDKSDEADC 294
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + F C + CI CD C D SDED C
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 81
>gi|61744467 low density lipoprotein receptor-related protein 8
isoform 3 precursor [Homo sapiens]
Length = 700
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F CD+G CI CDG ++CPDGSDE
Sbjct: 85 TCADSDFTCDNGHCIHERWKCDGEEECPDGSDE 117
Score = 40.4 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 305 GC---LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
GC L TC F C DG C+ C+ Q CPDGSDE C
Sbjct: 162 GCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDGSDEAGC 204
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + F C + CI CD C D SDED C
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 81
>gi|66082554 low density lipoprotein receptor-related protein 8
isoform 2 precursor [Homo sapiens]
Length = 793
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F CD+G CI CDG ++CPDGSDE
Sbjct: 85 TCADSDFTCDNGHCIHERWKCDGEEECPDGSDE 117
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + F C + CI CD C D SDED C
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 81
>gi|65301119 low density lipoprotein receptor-related protein 8
isoform 4 precursor [Homo sapiens]
Length = 904
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F CD+G CI CDG ++CPDGSDE
Sbjct: 85 TCADSDFTCDNGHCIHERWKCDGEEECPDGSDE 117
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 305 GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAASPAL- 363
GC C+ + F C + C+ CDG C DGSDE C A PA
Sbjct: 162 GCATLCAPHEFQCGNRSCLAAVFVCDGDDDCGDGSDERGC--------------ADPACG 207
Query: 364 PRTTGPSEDAGGDSLVEK 381
PR D GG + E+
Sbjct: 208 PREFRCGGDGGGACIPER 225
Score = 40.0 bits (92), Expect = 0.005
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
L TC F C DG C+ C+ Q CPDGSDE C
Sbjct: 296 LGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDGSDEAGC 333
Score = 32.0 bits (71), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
F C G C+ + CDG + C D SDE C
Sbjct: 265 FACRSGECVHLGWRCDGDRDCKDKSDEADC 294
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + F C + CI CD C D SDED C
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 81
>gi|65301164 very low density lipoprotein receptor isoform b [Homo
sapiens]
Length = 845
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNL 347
TC F C+DG CI + C+G++ C DGSDE C+N+
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNV 315
Score = 39.3 bits (90), Expect = 0.008
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TCS F C G CI C+G C DGSDE C
Sbjct: 153 TCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDC 188
Score = 38.9 bits (89), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C F C +G CI + CDG + C DGSDE C
Sbjct: 33 CEPSQFQCTNGRCITLLWKCDGDEDCVDGSDEKNC 67
Score = 38.5 bits (88), Expect = 0.014
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F C++G C+ CDG C DGSDE
Sbjct: 71 TCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDE 103
Score = 36.2 bits (82), Expect = 0.071
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHT 357
TC + F C CI I+ CD C D SDE Q R+ V HT
Sbjct: 192 TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQ---CGRQPVIHT 237
Score = 33.5 bits (75), Expect = 0.46
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 307 LHT-CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+HT C C G CI CDG C DGSDE C
Sbjct: 235 IHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC 273
Score = 32.7 bits (73), Expect = 0.79
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 307 LHTCSRYHFFCDDGC--CIDITLACDGVQQCPDGSDEDFCQNL 347
+ TC + C CI ++ CDG C G DE+ C N+
Sbjct: 110 MRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNI 152
Score = 32.0 bits (71), Expect = 1.3
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDE 341
F C G CIDI+ C+ Q C D SDE
Sbjct: 324 FKCRSGECIDISKVCNQEQDCRDWSDE 350
>gi|65301167 very low density lipoprotein receptor isoform a [Homo
sapiens]
Length = 873
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNL 347
TC F C+DG CI + C+G++ C DGSDE C+N+
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNV 315
Score = 39.3 bits (90), Expect = 0.008
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TCS F C G CI C+G C DGSDE C
Sbjct: 153 TCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDC 188
Score = 38.9 bits (89), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C F C +G CI + CDG + C DGSDE C
Sbjct: 33 CEPSQFQCTNGRCITLLWKCDGDEDCVDGSDEKNC 67
Score = 38.5 bits (88), Expect = 0.014
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC+ F C++G C+ CDG C DGSDE
Sbjct: 71 TCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDE 103
Score = 36.2 bits (82), Expect = 0.071
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHT 357
TC + F C CI I+ CD C D SDE Q R+ V HT
Sbjct: 192 TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQ---CGRQPVIHT 237
Score = 33.5 bits (75), Expect = 0.46
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 307 LHT-CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+HT C C G CI CDG C DGSDE C
Sbjct: 235 IHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC 273
Score = 32.7 bits (73), Expect = 0.79
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 307 LHTCSRYHFFCDDGC--CIDITLACDGVQQCPDGSDEDFCQNL 347
+ TC + C CI ++ CDG C G DE+ C N+
Sbjct: 110 MRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNI 152
Score = 32.0 bits (71), Expect = 1.3
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDE 341
F C G CIDI+ C+ Q C D SDE
Sbjct: 324 FKCRSGECIDISKVCNQEQDCRDWSDE 350
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 44.3 bits (103), Expect = 3e-04
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC----QNLGLDRKMVTHTAASP 361
C C F C G CI + CD C DGSDE+ C + LD +T P
Sbjct: 3609 CTPRCDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKP 3668
Query: 362 ALPRTTGPSEDAGGDSLVEKSQKAT----APNKP 391
+ G ED GD+ E ++ PN+P
Sbjct: 3669 LAWKCDG--EDDCGDNSDENPEECARFVCPPNRP 3700
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 305 GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
GC H+CS F C+ G CI CDG C D SDE
Sbjct: 1010 GCSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDE 1046
Score = 38.1 bits (87), Expect = 0.019
Identities = 17/35 (48%), Positives = 18/35 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
CS F C +G CI CDG C DGSDE C
Sbjct: 3575 CSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDC 3609
Score = 37.0 bits (84), Expect = 0.042
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 309 TCSRYHFFCDDGC-CIDITLACDGVQQCPDGSDE 341
TCS F C D CI CDG + CPDGSDE
Sbjct: 26 TCSPKQFACRDQITCISKGWRCDGERDCPDGSDE 59
Score = 36.6 bits (83), Expect = 0.055
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDE 341
F C +G CI+ +L CDGV C D SDE
Sbjct: 2530 FECANGECINFSLTCDGVPHCKDKSDE 2556
Score = 36.2 bits (82), Expect = 0.071
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 282 DTAGQRSSDNVSVTVLRAAYSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
D G RS ++ S AY T C F C++G CI+I CD C D SDE
Sbjct: 959 DDCGDRSDESAS-----CAYPT--CFPLTQ---FTCNNGRCININWRCDNDNDCGDNSDE 1008
Query: 342 DFCQN 346
C +
Sbjct: 1009 AGCSH 1013
Score = 36.2 bits (82), Expect = 0.071
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 302 STGGCLHTCS-RYHFFCDDGC-CIDITLACDGVQQCPDGSDEDFCQNL 347
S G H C F C D CI CDG C D SDE+ C++L
Sbjct: 1096 SCEGVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCEDNSDEENCESL 1143
Score = 36.2 bits (82), Expect = 0.071
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 305 GCLH--TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
GCL+ TC F C + CI CD + C DGSDE
Sbjct: 2811 GCLYNSTCDDREFMCQNRQCIPKHFVCDHDRDCADGSDE 2849
Score = 35.8 bits (81), Expect = 0.093
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C CS F C + CI CDG C DGSDE
Sbjct: 2730 CNKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDE 2765
Score = 35.8 bits (81), Expect = 0.093
Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ---NLGLDRKMVTHTAASPALPRT 366
C F C G C + CDG C D SDE C L K P + R
Sbjct: 3374 CRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRC 3433
Query: 367 TGPSEDAGGDSLVEKSQKATAPNK 390
G G+ + + APN+
Sbjct: 3434 NGQDNCGDGEDERDCPEVTCAPNQ 3457
Score = 35.4 bits (80), Expect = 0.12
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 285 GQRSSDNVSVTVLRAAYSTGGCLHTCSRYHFFCD-DGCCIDITLACDGVQQCPDGSDEDF 343
G S + + +A GGC HT F C DG CI + CDG C D SDE
Sbjct: 1041 GDYSDETHANCTNQATRPPGGC-HTDE---FQCRLDGLCIPLRWRCDGDTDCMDSSDEKS 1096
Query: 344 CQNL 347
C+ +
Sbjct: 1097 CEGV 1100
Score = 35.4 bits (80), Expect = 0.12
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 308 HTCSRY-HFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ-NLGLDRKM 353
H C+ F C G C+ L C+G C D SDE C N L RK+
Sbjct: 2902 HKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKL 2949
Score = 34.3 bits (77), Expect = 0.27
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 309 TCSRYHFFC-DDGCCIDITLACDGVQQCPDGSDE 341
TC F C D G CI CDG C DGSDE
Sbjct: 3493 TCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526
Score = 34.3 bits (77), Expect = 0.27
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TC Y F C + C+ CD C D SDE+ C
Sbjct: 3535 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESC 3570
Score = 33.9 bits (76), Expect = 0.35
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + C +G C+ L C+G C DGSDE C
Sbjct: 2566 CKKTFRQCSNGRCVSNMLWCNGADDCGDGSDEIPC 2600
Score = 33.5 bits (75), Expect = 0.46
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C +F C G CI ++ CD C G DE C
Sbjct: 2696 CPLNYFACPSGRCIPMSWTCDKEDDCEHGEDETHC 2730
Score = 33.5 bits (75), Expect = 0.46
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 303 TGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
T H + F C + C+ +L C+ C DGSDE+ C
Sbjct: 3735 TAHTTHCKDKKEFLCRNQRCLSSSLRCNMFDDCGDGSDEEDC 3776
Score = 32.7 bits (73), Expect = 0.79
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 304 GGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDED 342
G + TC F C++ C + CDG C D SDE+
Sbjct: 3648 GTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDEN 3686
Score = 32.3 bits (72), Expect = 1.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC F C G CI I+ CD C D SDE
Sbjct: 935 TCPPNQFSCASGRCIPISWTCDLDDDCGDRSDE 967
Score = 32.3 bits (72), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 318 DDGCCIDITLACDGVQQCPDGSDEDFCQ 345
+D C+ I CDG C DG+DE+ C+
Sbjct: 3705 NDRVCLWIGRQCDGTDNCGDGTDEEDCE 3732
Score = 32.0 bits (71), Expect = 1.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
HTC F C++ CI CDG C + DE
Sbjct: 893 HTCPSDRFKCENNRCIPNRWLCDGDNDCGNSEDE 926
Score = 31.6 bits (70), Expect = 1.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C+ C+ F C + CI CD C D SDE
Sbjct: 3330 CVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDE 3365
Score = 31.2 bits (69), Expect = 2.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 322 CIDITLACDGVQQCPDGSDE 341
C+ ++ C+GVQ C DGSDE
Sbjct: 85 CVPMSRLCNGVQDCMDGSDE 104
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C F C DG CI + C+ C D SDE C
Sbjct: 2605 CGVGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNC 2639
Score = 29.3 bits (64), Expect = 8.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C F C + CI CDG C D SDE
Sbjct: 854 CQPGEFACANSRCIQERWKCDGDNDCLDNSDE 885
>gi|4507157 sortilin-related receptor containing LDLR class A repeats
preproprotein [Homo sapiens]
Length = 2214
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDED 342
HTC +F C +G CI ACDG C DGSDED
Sbjct: 1197 HTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDED 1231
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
C + F C +G CI + CDG+ C D SDE C+N
Sbjct: 1325 CDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCEN 1361
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TC ++ C G C+ T CDG + C DGSDE+ C
Sbjct: 1418 TCLPNYYRCSSGTCVMDTWVCDGYRDCADGSDEEAC 1453
Score = 40.8 bits (94), Expect = 0.003
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDEDFCQNL 347
F C +G CI + CDG++ C DGSDE C+ L
Sbjct: 1242 FRCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPL 1274
Score = 37.4 bits (85), Expect = 0.032
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 309 TCSRYHFFCDDG-CCIDITLACDGVQQCPDGSDEDFCQN 346
TC F C+DG CI ++ CDG C D SDE C +
Sbjct: 1513 TCMSREFQCEDGEACIVLSERCDGFLDCSDESDEKACSD 1551
Score = 36.6 bits (83), Expect = 0.055
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+H C + C G CI + CDG C D SDE C
Sbjct: 1155 MHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANC 1192
Score = 35.0 bits (79), Expect = 0.16
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 300 AYSTGGCLHTCSRYHFFCDDG-CCIDITLACDGVQQCPDGSDEDFC 344
A ST L C R+ F C CI CDG Q C DG DE C
Sbjct: 1461 AASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANC 1506
Score = 34.7 bits (78), Expect = 0.21
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 310 CSRY-HFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
CSRY F C++G CI CD C D SDE C
Sbjct: 1368 CSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDC 1403
Score = 33.1 bits (74), Expect = 0.60
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 322 CIDITLACDGVQQCPDGSDED 342
C+ ++ CDG+ QC DGSDED
Sbjct: 1289 CLFHSMVCDGIIQCRDGSDED 1309
Score = 32.7 bits (73), Expect = 0.79
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+TC R + C +G CI+ CD C D SDE C
Sbjct: 1076 NTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDERNC 1112
Score = 30.4 bits (67), Expect = 3.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 318 DDGCCIDITLACDGVQQCPDGSDEDFCQ 345
+ G CI ++ CD C D SDE C+
Sbjct: 1127 ESGTCIPLSYKCDLEDDCGDNSDESHCE 1154
>gi|157384998 low density lipoprotein receptor-related protein 4
[Homo sapiens]
Length = 1905
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 305 GC-LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
GC L TCS F CD+G CI + CDG C D SDE C
Sbjct: 65 GCILPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDC 105
Score = 43.1 bits (100), Expect = 6e-04
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLG 348
C+ F C G C+ ++ CDG C D SDE+ C+N G
Sbjct: 270 CTAEQFRCHSGRCVRLSWRCDGEDDCADNSDEENCENTG 308
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 307 LHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+ CS F C DG CI CDG C DGSDE+ C
Sbjct: 145 MRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEENC 182
Score = 37.7 bits (86), Expect = 0.025
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C F CD G CI+ CDG C D SDE C
Sbjct: 231 CRSGEFMCDSGLCINAGWRCDGDADCDDQSDERNC 265
Score = 34.3 bits (77), Expect = 0.27
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 310 CSRYHFFC-----DDGCCIDITLACDGVQQCPDGSDEDFC 344
C R HF C + CI CDG C D SDED C
Sbjct: 27 CGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGC 66
Score = 34.3 bits (77), Expect = 0.27
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
C+ F C +G CI C+GV C D SDE QN
Sbjct: 312 CALDQFLCWNGRCIGQRKLCNGVNDCGDNSDESPQQN 348
Score = 32.3 bits (72), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C F C +G CI CDG C D SDE
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDE 141
Score = 31.2 bits (69), Expect = 2.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
C+ F C G CI CDG C D SDE C +
Sbjct: 191 CNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSS 227
>gi|28557796 low density lipoprotein receptor class A domain
containing 3 [Homo sapiens]
Length = 345
Score = 43.9 bits (102), Expect = 3e-04
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
CS + C +G CID + CDG C D SDE+ C++
Sbjct: 113 CSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESCES 149
Score = 34.7 bits (78), Expect = 0.21
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 310 CSRYHFFCDDGC-CIDITLACDGVQQCPDGSDEDFC 344
C F C G CI C+G + CPDGSDE+ C
Sbjct: 71 CGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENC 106
Score = 33.5 bits (75), Expect = 0.46
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 314 HFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+F C +G CI CDG+ C D SDE C
Sbjct: 34 NFMCSNGRCIPGAWQCDGLPDCFDKSDEKEC 64
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 305 GCLHTCSRYHFFCDDGC-CIDITLACDGVQQCPDGSDE--DFCQNLGLDRKMVTHTAASP 361
GC C+ +H C G C+ CDGV+QCPDGSDE D C GL + P
Sbjct: 1598 GCGGPCAPHHAPCARGPHCVSPEQLCDGVRQCPDGSDEGPDACG--GLPALGGPNRTGLP 1655
Query: 362 ALPRTTGPSEDAGGDSLVEKSQKATAPNKPPALSNTEKRNHSAFWGPESQIIPVMPDSSS 421
P T P+ G LV Q +P + + + WGP S P
Sbjct: 1656 C-PEYTCPNGTCIGFQLVCDGQPDC--GRPGQVGPSPEEQGCGAWGPWSPWGPCSRTCGP 1712
Query: 422 SGKNR 426
G+ R
Sbjct: 1713 WGQGR 1717
Score = 38.9 bits (89), Expect = 0.011
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC C DG C+ CDGV CPDG+DE
Sbjct: 1491 TCVPGEVSCVDGTCLGAIQLCDGVWDCPDGADE 1523
Score = 34.7 bits (78), Expect = 0.21
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+ C + C DG C+ L CDG C D +DE+ C
Sbjct: 1450 YPCPQGLLACADGRCLPPALLCDGHPDCLDAADEESC 1486
Score = 34.3 bits (77), Expect = 0.27
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
CS C G C+ CD C DGSDED C
Sbjct: 2464 CSPSQLSCGSGECLSAERRCDLRPDCQDGSDEDGC 2498
Score = 33.1 bits (74), Expect = 0.60
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C + F C G C CD + C DGSDE C
Sbjct: 1565 CGPFEFRCGSGECTPRGWRCDQEEDCADGSDERGC 1599
Score = 32.7 bits (73), Expect = 0.79
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C C G C+ + L CD C DG+DE
Sbjct: 1416 CGEGQMTCSSGHCLPLALLCDRQDDCGDGTDE 1447
Score = 32.7 bits (73), Expect = 0.79
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 CDDGCCIDITLACDGVQQCPDGSDEDFC 344
C G C+ CDGV C DGSDE+ C
Sbjct: 2241 CASGECVLRGGPCDGVLDCEDGSDEEGC 2268
Score = 31.2 bits (69), Expect = 2.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 317 CDDGCCIDITLACDGVQQCPDGSDEDFC 344
C+ C++ CDG + C DGSDE C
Sbjct: 2398 CEVLGCVEQAQVCDGREDCLDGSDERHC 2425
Score = 30.8 bits (68), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 310 CSRYHFFC-DDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVT 355
C+ C ++G C+ CD C DGSDE+ C G +T
Sbjct: 1376 CAEGEALCQENGHCVPHGWLCDNQDDCGDGSDEEGCAAPGCGEGQMT 1422
>gi|223942069 enterokinase precursor [Homo sapiens]
Length = 1019
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 298 RAAYSTG---GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC--------QN 346
+A ++TG G C HF C +G C+ + CDG C DGSDE C N
Sbjct: 628 KANFTTGYHLGIPEPCKADHFQCKNGECVPLVNLCDGHLHCEDGSDEADCVRFFNGTTNN 687
Query: 347 LGLDR---KMVTHTAAS 360
GL R + + HTA +
Sbjct: 688 NGLVRFRIQSIWHTACA 704
Score = 37.4 bits (85), Expect = 0.032
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 317 CDDGC-CIDITLACDGVQQCPDGSDED--FCQNLGLDRKMVTHTAASPALPRTTGPSE 371
C D CI L CDG CPDGSDED C + R ++T ++ S PSE
Sbjct: 191 CTDALTCIKADLFCDGEVNCPDGSDEDNKMCATVCDGRFLLTGSSGSFQATHYPKPSE 248
>gi|4504975 low density lipoprotein receptor precursor [Homo
sapiens]
Length = 860
Score = 42.0 bits (97), Expect = 0.001
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C R F C DG CI CDG +C DGSDE
Sbjct: 27 CERNEFQCQDGKCISYKWVCDGSAECQDGSDE 58
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TCS+ F C DG CI CD + C DGSDE C
Sbjct: 108 TCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 143
Score = 39.7 bits (91), Expect = 0.006
Identities = 19/47 (40%), Positives = 22/47 (46%)
Query: 298 RAAYSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
R Y G CS + F C G CI + CDG C D SDE+ C
Sbjct: 185 RGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 231
Score = 35.8 bits (81), Expect = 0.093
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGL 349
TC F C DG CI + CD C D SDE C N+ L
Sbjct: 235 TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTL 275
Score = 34.3 bits (77), Expect = 0.27
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC F C+ CI ACD C DGSDE
Sbjct: 147 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDE 179
Score = 30.4 bits (67), Expect = 3.9
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 302 STGGCLHTCSR----YHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNL 347
+ GGC H C+ Y C DG + C+ + +C D D C L
Sbjct: 321 NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDEC---QDPDTCSQL 367
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 309 TCSRY-HFFCDDGCCIDITLACDGVQQCPDGSDED--FCQN 346
+C+ Y F C +G CID L CDG+ C D SDE +C+N
Sbjct: 2509 SCNAYSEFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCEN 2549
Score = 41.2 bits (95), Expect = 0.002
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
H C +F C G CI T CDG + C DG DE C +
Sbjct: 2680 HKCEENYFSCPSGRCILNTWICDGQKDCEDGRDEFHCDS 2718
Score = 40.8 bits (94), Expect = 0.003
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 305 GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
GC+H+C F C G CI ACDG C D SDE
Sbjct: 1001 GCVHSCFDNQFRCSSGRCIPGHWACDGDNDCGDFSDE 1037
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 306 CLHTCSRYHFFCDDGC-CIDITLACDGVQQCPDGSDEDFCQNLG 348
C+ C F C + CI I CDG+ C DGSDE+ C+ G
Sbjct: 3628 CVTECKEDQFRCKNKAHCIPIRWLCDGIHDCVDGSDEENCERGG 3671
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ-NLGLDRKMVTHTAASPALPRTT 367
TC+ F C +G C+ CDG C DGSDE C+ + D+ ++ PA +
Sbjct: 3514 TCTLKDFLCANGDCVSSRFWCDGDFDCADGSDERNCETSCSKDQFRCSNGQCIPAKWKCD 3573
Query: 368 GPSEDAGGDSLVEKSQKATAP 388
G + G+ EKS + +P
Sbjct: 3574 GHEDCKYGED--EKSCEPASP 3592
Score = 39.3 bits (90), Expect = 0.008
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
C +CS+ F C +G CI CDG + C G DE C+
Sbjct: 3549 CETSCSKDQFRCSNGQCIPAKWKCDGHEDCKYGEDEKSCE 3588
Score = 38.5 bits (88), Expect = 0.014
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
TCS + C CI +L C+G C DGSDE C
Sbjct: 3593 TCSSREYICASDGCISASLKCNGEYDCADGSDEMDC 3628
Score = 38.1 bits (87), Expect = 0.019
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
C + F C + CI + L CD + C DGSDE C+
Sbjct: 3762 CKKDEFACSNKKCIPMDLQCDRLDDCGDGSDEQGCR 3797
Score = 37.4 bits (85), Expect = 0.032
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 302 STGGCL--HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
ST GC +TC F C + CI CD C DGSDE
Sbjct: 2795 STAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDE 2836
Score = 37.0 bits (84), Expect = 0.042
Identities = 16/35 (45%), Positives = 17/35 (48%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDED 342
H C F C + CI CDG C DGSDED
Sbjct: 843 HICKAGEFRCKNRHCIQARWKCDGDDDCLDGSDED 877
Score = 37.0 bits (84), Expect = 0.042
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
TC+ F C DG CI + C+ C D SDE C N
Sbjct: 2590 TCATVEFRCADGTCIPRSARCNQNIDCADASDEKNCNN 2627
Score = 36.6 bits (83), Expect = 0.055
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
CL C+ F C CI CD V C DGSDE
Sbjct: 3313 CLSNCTASQFRCKTDKCIPFWWKCDTVDDCGDGSDE 3348
Score = 35.0 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+C+ F C +G CI CD C DGSDE C
Sbjct: 2890 SCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNC 2925
Score = 34.7 bits (78), Expect = 0.21
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 310 CSRYHFFCD-DGCCIDITLACDGVQQCPDGSDEDFC 344
C+ F C DG C+ CDG + C DGSDE C
Sbjct: 1053 CNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDEKGC 1088
Score = 34.7 bits (78), Expect = 0.21
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQ 345
TC + F C + CI CD C D SDE+ C+
Sbjct: 3475 TCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCK 3511
Score = 33.5 bits (75), Expect = 0.46
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 309 TCSRYHFFCDDG-CCIDITLACDGVQQCPDGSDE 341
TC+ F C C+ CDG + CPDGSDE
Sbjct: 2760 TCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 2793
Score = 32.7 bits (73), Expect = 0.79
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 310 CSRYHFFCDDG-CCIDITLACDGVQQCPDGSDE 341
C F C DG C ++ CDG CPD SDE
Sbjct: 2845 CGTEEFSCADGRCLLNTQWQCDGDFDCPDHSDE 2877
Score = 32.3 bits (72), Expect = 1.0
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 310 CSRYHFFC-DDGCCIDITLACDGVQQCPDGSDED-FCQNL 347
C H C C+ ++ C+GV CPDG DE CQ L
Sbjct: 77 CPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQEL 116
Score = 32.3 bits (72), Expect = 1.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 315 FFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRK 352
F C G CI CD C DGSDE C + D +
Sbjct: 973 FVCKSGRCISSKWHCDSDDDCGDGSDEVGCVHSCFDNQ 1010
Score = 32.0 bits (71), Expect = 1.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
C +CS F C CI CDG C DG DE
Sbjct: 2716 CDSSCSWNQFACSAQKCISKHWICDGEDDCGDGLDE 2751
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDF-CQNLGLD 350
H C+ D C+ C+G + CPDGSDE + C L+
Sbjct: 1141 HPCAN-----DTSVCLQPEKLCNGKKDCPDGSDEGYLCDECSLN 1179
Score = 31.6 bits (70), Expect = 1.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 311 SRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+R H ++ C+ C+G+ +C D SDED C
Sbjct: 3718 TRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHC 3751
Score = 31.2 bits (69), Expect = 2.3
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 310 CSRYHFFCDDGC-CIDITLACDGVQQCPDGSDE 341
C F C D C+ + CDG CPD SDE
Sbjct: 32 CDPGEFLCHDHVTCVSQSWLCDGDPDCPDDSDE 64
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 305 GCLHTCS-RYHFFC-DDGCCIDITLACDGVQQCPDGSDEDFCQN 346
G + C + F C G CI+ CDG C D SDED C +
Sbjct: 1090 GTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCEDQSDEDDCDS 1133
Score = 30.8 bits (68), Expect = 3.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C F C G C CDG C D SDE C
Sbjct: 3357 CQPGRFQCGTGLCALPAFICDGENDCGDNSDELNC 3391
Score = 30.0 bits (66), Expect = 5.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 308 HTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
H+C F C + CI CDG C DE
Sbjct: 884 HSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDE 917
Score = 29.3 bits (64), Expect = 8.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDE 341
TC F C +G CI CD C D +DE
Sbjct: 926 TCQVDQFSCGNGRCIPRAWLCDREDDCGDQTDE 958
Score = 29.3 bits (64), Expect = 8.7
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 308 HTCSRYHFFCDDGC-CIDITLACDGVQQCPDGSDEDFC 344
H C F C CI + L C+G C D DE C
Sbjct: 3394 HVCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDC 3431
Score = 29.3 bits (64), Expect = 8.7
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDE--DFC 344
C F C++ C CDG C D SDE D C
Sbjct: 3674 CRADEFLCNNSLCKLHFWVCDGEDDCGDNSDEAPDMC 3710
>gi|119709832 low density lipoprotein receptor-related protein 5 [Homo
sapiens]
Length = 1615
Score = 41.2 bits (95), Expect = 0.002
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 305 GCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTHTAASPALP 364
GC CS F C G C+D+ L CDG C D SDE C + L + + +
Sbjct: 1294 GC-PVCSAAQFPCARGQCVDLRLRCDGEADCQDRSDEADCDAICLPNQFRCASGQCVLIK 1352
Query: 365 RTTGPSEDA--GGDSLVEKSQKATAPNKPPALSNTEKRNHSAFWGPESQII 413
+ D G D L+ + K + + P HS+ GP II
Sbjct: 1353 QQCDSFPDCIDGSDELMCEITKPPSDDSPA---------HSSAIGPVIGII 1394
Score = 33.1 bits (74), Expect = 0.60
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 309 TCSRYHFFCDDG--CCIDITLACDGVQQCPDGSDEDFC 344
TCS F C G CI CDG +C D SDE+ C
Sbjct: 1258 TCSPDQFACATGEIDCIPGAWRCDGFPECDDQSDEEGC 1295
>gi|208973262 low density lipoprotein-related protein 12 isoform b
precursor [Homo sapiens]
Length = 840
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 288 SSDNVSVTVLRAAYSTGGCLH-TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
S DN+S R AY +G C+ F C +G CI C+ + +C D SDE+ C
Sbjct: 124 SDDNISRKGFRLAYFSGKSEEPNCACDQFRCGNGKCIPEAWKCNNMDECGDSSDEEIC 181
Score = 33.9 bits (76), Expect = 0.35
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C +F C + C+ + CD C DGSDE+ C
Sbjct: 432 CQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEENC 466
>gi|7305525 low density lipoprotein-related protein 12 isoform a
precursor [Homo sapiens]
Length = 859
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 288 SSDNVSVTVLRAAYSTGGCLH-TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
S DN+S R AY +G C+ F C +G CI C+ + +C D SDE+ C
Sbjct: 143 SDDNISRKGFRLAYFSGKSEEPNCACDQFRCGNGKCIPEAWKCNNMDECGDSSDEEIC 200
Score = 33.9 bits (76), Expect = 0.35
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
C +F C + C+ + CD C DGSDE+ C
Sbjct: 451 CQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEENC 485
>gi|222831592 transmembrane protease, serine 7 [Homo sapiens]
Length = 717
Score = 40.0 bits (92), Expect = 0.005
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 289 SDNVSVTVLRAAYSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
S +S L A Y + C F C G C+ CDGV C D SDE FC
Sbjct: 337 SSRLSDKPLLAEYGSYNISQPCPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFC 392
Score = 35.8 bits (81), Expect = 0.093
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 310 CSRYHFFCDDGCCIDITLA-CDGVQQCPDGSDEDFCQNLGLDRKMVTHTAASPALPRTTG 368
C+ F C + C A CDG CPDGSDE+ C T + +S AL R G
Sbjct: 433 CNNRTFKCGNDICFRKQNAKCDGTVDCPDGSDEEGC----------TCSRSSSALHRIIG 482
Query: 369 PSEDAGG 375
++ G
Sbjct: 483 GTDTLEG 489
>gi|32490559 low density lipoprotein receptor-related protein 10
precursor [Homo sapiens]
Length = 713
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 306 CLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVT 355
C H C +F C D C+ T CDG C DGSDE C + L RK++T
Sbjct: 396 CRH-CQPGNFRCRDEKCVYETWVCDGQPDCADGSDEWDCSYV-LPRKVIT 443
Score = 35.8 bits (81), Expect = 0.093
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQN 346
C + F C + C+ CDGV C DGSDE C +
Sbjct: 140 CLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSS 176
>gi|148727288 low density lipoprotein receptor-related protein 6 [Homo
sapiens]
Length = 1613
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGL 349
CS F C G CID L C+G C D SDE C+ L L
Sbjct: 1288 CSESQFQCASGQCIDGALRCNGDANCQDKSDEKNCEVLCL 1327
Score = 33.9 bits (76), Expect = 0.35
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 309 TCSRYHFFCDDG--CCIDITLACDGVQQCPDGSDEDFC 344
TCS F C G CI + CDG +C D SDE C
Sbjct: 1248 TCSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDELNC 1285
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 38.9 bits (89), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
CS F C G C++ +L CDG C D SDE C
Sbjct: 306 CSENLFHCHTGKCLNYSLVCDGYDDCGDLSDEQNC 340
Score = 38.9 bits (89), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
CS HF C G C+ + CDG C D SDE+ C
Sbjct: 580 CSPSHFKCRSGQCVLASRRCDGQADCDDDSDEENC 614
Score = 38.5 bits (88), Expect = 0.014
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 CDDGCCIDITLACDGVQQCPDGSDEDFC 344
C +G CI T CDG + C DGSDE+ C
Sbjct: 387 CRNGQCIPSTFQCDGDEDCKDGSDEENC 414
Score = 36.6 bits (83), Expect = 0.055
Identities = 21/59 (35%), Positives = 23/59 (38%)
Query: 286 QRSSDNVSVTVLRAAYSTGGCLHTCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
Q S NVS G L +F C G CI L C+G C D SDE C
Sbjct: 246 QTESSNVSRICFSPQQENGKQLLCGRGENFLCASGICIPGKLQCNGYNDCDDWSDEAHC 304
Score = 32.7 bits (73), Expect = 0.79
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 317 CDDGCCIDITLACDGVQQCPDGSDEDFC 344
C DG CI + CDG C D SDE C
Sbjct: 350 CGDGRCIAMEWVCDGDHDCVDKSDEVNC 377
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 310 CSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRK----MVTHTAAS 360
C C + C+ L CDG C D SDE C L ++ ++ H AA+
Sbjct: 655 CQDDELECANHACVSRDLWCDGEADCSDSSDEWDCVTLSINVNSSSFLMVHRAAT 709
Score = 30.4 bits (67), Expect = 3.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 322 CIDITLACDGVQQCPDGSDE---DFCQN 346
C+ T+ CDG CPD DE FCQ+
Sbjct: 630 CLKHTVICDGFPDCPDYMDEKNCSFCQD 657
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 38.5 bits (88), Expect = 0.014
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 322 CIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVTH--TAASPAL-PRTTGPSE 371
C+ + CDG+Q C DGSDE C +L R++ + + ASP L GPS+
Sbjct: 227 CLPVERRCDGLQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSD 279
Score = 38.5 bits (88), Expect = 0.014
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFCQNLGLDRKMVT 355
+C F C CI T CDG + C DGSDE C + RK++T
Sbjct: 454 SCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCL-AAVPRKVIT 499
Score = 36.6 bits (83), Expect = 0.055
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 309 TCSRYHFFCDDGCCIDITLACDGVQQCPDGSDEDFC 344
+C F CD+G C+ C+ V +C DGSDE C
Sbjct: 165 SCQADEFRCDNGKCLPGPWQCNTVDECGDGSDEGNC 200
>gi|227499990 transmembrane protease, serine 2 isoform 1 [Homo
sapiens]
Length = 529
Score = 37.7 bits (86), Expect = 0.025
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 310 CSRYHFFCDD-GCCIDITLACDGVQQCPDGSDEDFCQNL 347
CS CD G CI+ + CDGV CP G DE+ C L
Sbjct: 150 CSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRL 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,789,541
Number of Sequences: 37866
Number of extensions: 1204490
Number of successful extensions: 5476
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 5098
Number of HSP's gapped (non-prelim): 399
length of query: 500
length of database: 18,247,518
effective HSP length: 106
effective length of query: 394
effective length of database: 14,233,722
effective search space: 5608086468
effective search space used: 5608086468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.