Guide to the Human Genome
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Name: KIAA0319 Sequence: fasta or formatted (1072aa) NCBI GI: 134304840
Description:

KIAA0319

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         58           2
 C cysteine            1.9         20           3
 D aspartate           5.7         61           2
 E glutamate           6.4         69           2
 F phenylalanine       2.4         26           1
 G glycine             6.1         65           2
 H histidine           2.4         26           1
 I isoleucine          4.0         43           2
 K lysine              4.6         49           2
 L leucine             9.8        105           4
 M methionine          1.6         17           2
 N asparagine          4.0         43           2
 P proline             6.7         72           2
 Q glutamine           4.2         45           2
 R arginine            4.6         49           2
 S serine             10.4        111           4
 T threonine           7.6         81           2
 V valine              8.4         90           2
 W tryptophan          1.3         14           2
 Y tyrosine            2.6         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA0319 
KIAA0319L             0.413   dyslexia susceptibility 2-like 
LRP11                 0.025   low density lipoprotein receptor-related protein 11...
COL7A1                0.012   alpha 1 type VII collagen precursor 
MUC17                 0.012   mucin 17 
PRG4                  0.011   proteoglycan 4 isoform D 
PRG4                  0.011   proteoglycan 4 isoform C 
PRG4                  0.011   proteoglycan 4 isoform B 
PRG4                  0.011   proteoglycan 4 isoform A 
MUC2                  0.011   mucin 2 precursor 
LOC647546             0.011   PREDICTED: hypothetical protein 
LOC284297             0.009   hypothetical protein LOC284297 
MUC4                  0.009   mucin 4 isoform a 
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
ZAN                   0.009   zonadhesin isoform 3 
ZAN                   0.009   zonadhesin isoform 6 
SRCAP                 0.009   Snf2-related CBP activator protein 
HEG1                  0.009   HEG homolog 1 
PKD1                  0.008   polycystin 1 isoform 2 precursor 
PKD1                  0.008   polycystin 1 isoform 1 precursor 
MUC7                  0.008   mucin 7, secreted precursor 
MUC7                  0.008   mucin 7, secreted precursor 
MUC7                  0.008   mucin 7, secreted precursor 
WIPF3                 0.008   WAS/WASL interacting protein family, member 3 [Homo...
FRMPD3                0.008   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.008   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.008   PREDICTED: FERM and PDZ domain containing 3 
LRRC37A2              0.008   c114 SLIT-like testicular protein 
LRRC37A               0.008   leucine rich repeat containing 37A 
LOC100288229          0.008   PREDICTED: hypothetical protein XP_002343606 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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