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Search of human proteins with 239757587
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757587 PREDICTED: similar to Putative uncharacterized
C21orf104 protein [Homo sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757587 PREDICTED: similar to Putative uncharacterized C21o... 539 e-153
gi|239752092 PREDICTED: hypothetical protein [Homo sapiens] 537 e-153
gi|239746589 PREDICTED: hypothetical protein XP_002343791 [Homo ... 537 e-153
gi|239753510 PREDICTED: hypothetical protein [Homo sapiens] 36 0.040
gi|239742053 PREDICTED: hypothetical protein XP_002342380 [Homo ... 33 0.26
gi|18765741 snail 1 homolog [Homo sapiens] 33 0.34
gi|27886539 nuclear factor of activated T-cells, cytoplasmic, ca... 32 0.44
gi|27886541 nuclear factor of activated T-cells, cytoplasmic, ca... 32 0.44
gi|209862843 nuclear factor of activated T-cells, cytoplasmic, c... 32 0.44
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 32 0.44
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 31 0.98
gi|18699730 solute carrier family 16, member 10 [Homo sapiens] 31 0.98
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 1.7
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 30 2.8
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ... 29 3.7
gi|118918435 von Willebrand factor A domain containing 3B [Homo ... 29 3.7
gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [H... 29 3.7
gi|188536004 zinc finger protein 469 [Homo sapiens] 29 4.8
gi|4757836 BRCA1 associated protein-1 [Homo sapiens] 29 4.8
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 29 4.8
gi|38570115 zinc finger protein 362 [Homo sapiens] 29 4.8
gi|66529407 tensin [Homo sapiens] 28 6.3
gi|134142822 zinc finger protein 133 [Homo sapiens] 28 6.3
gi|27545332 zinc finger protein 133 [Homo sapiens] 28 6.3
gi|187608784 transmembrane channel-like 6 [Homo sapiens] 28 6.3
gi|187608791 transmembrane channel-like 6 [Homo sapiens] 28 6.3
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 28 6.3
gi|87252717 hypothetical protein LOC284618 [Homo sapiens] 28 6.3
>gi|239757587 PREDICTED: similar to Putative uncharacterized
C21orf104 protein [Homo sapiens]
Length = 265
Score = 539 bits (1388), Expect = e-153
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS
Sbjct: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
Query: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW
Sbjct: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
Query: 121 RAGEVWLLGLLAAFQCAVAEHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
RAGEVWLLGLLAAFQCAVAEHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS
Sbjct: 121 RAGEVWLLGLLAAFQCAVAEHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
Query: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS
Sbjct: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
Query: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
LCSEALSNSEPPRVPDPAPGNSQAA
Sbjct: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
>gi|239752092 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 537 bits (1384), Expect = e-153
Identities = 264/265 (99%), Positives = 265/265 (100%)
Query: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS
Sbjct: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
Query: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW
Sbjct: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
Query: 121 RAGEVWLLGLLAAFQCAVAEHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
RAGEVWLLGLLAAFQCAVA+HVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS
Sbjct: 121 RAGEVWLLGLLAAFQCAVAKHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
Query: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS
Sbjct: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
Query: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
LCSEALSNSEPPRVPDPAPGNSQAA
Sbjct: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
>gi|239746589 PREDICTED: hypothetical protein XP_002343791 [Homo
sapiens]
Length = 265
Score = 537 bits (1384), Expect = e-153
Identities = 264/265 (99%), Positives = 265/265 (100%)
Query: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS
Sbjct: 1 MEGCLRIEEALTLGGACLFAGLAFLWAAFAQHFSAADSPGTEFTPATTTSRLLHVLYVCS 60
Query: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW
Sbjct: 61 CSLVAEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFRGSQSSDSIRYRRGGNEGVRPW 120
Query: 121 RAGEVWLLGLLAAFQCAVAEHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
RAGEVWLLGLLAAFQCAVA+HVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS
Sbjct: 121 RAGEVWLLGLLAAFQCAVAKHVNEAFLSHSFHGACRRNPRMEPKGARGGVGGVLVFRAPS 180
Query: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS
Sbjct: 181 QSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVS 240
Query: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
LCSEALSNSEPPRVPDPAPGNSQAA
Sbjct: 241 LCSEALSNSEPPRVPDPAPGNSQAA 265
>gi|239753510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 35.8 bits (81), Expect = 0.040
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 190 CAQAQLQQASLPERAKS--QNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVSLCSEALS 247
C++A +L R K QN S L P C QLH Q+P++ R+ L EAL
Sbjct: 74 CSKAPTCDGALQSRLKCAFQNSS---LGPLRTLCKQLHESVGQLPKVL--RIELLVEALL 128
Query: 248 NSEPPRVPDPAP 259
S+PP P P
Sbjct: 129 TSKPPAHPSHLP 140
>gi|239742053 PREDICTED: hypothetical protein XP_002342380 [Homo
sapiens]
Length = 311
Score = 33.1 bits (74), Expect = 0.26
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 221 CPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPAPGN 261
C QLH Q+P++ R+ L EAL S+PP P P +
Sbjct: 131 CKQLHESVGQLPKVL--RIELLVEALLTSKPPAHPSHLPSS 169
>gi|18765741 snail 1 homolog [Homo sapiens]
Length = 264
Score = 32.7 bits (73), Expect = 0.34
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 192 QAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHP------RTAQIPQIAVKRVSLCSEA 245
QA L A P + S P+L+ D+ PQ P R + P++A ++
Sbjct: 37 QAHLLAAIPPPEILNPTASLPMLIWDSVLAPQAQPIAWASLRLQESPRVAELTSLSDEDS 96
Query: 246 LSNSEPPRVPDPAPGN 261
S+PP P PAP +
Sbjct: 97 GKGSQPPSPPSPAPSS 112
>gi|27886539 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform B [Homo sapiens]
Length = 921
Score = 32.3 bits (72), Expect = 0.44
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 177 RAPSQSASPSLPL---CAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQ 233
R S+S+SP CA+A + +LP A Q P P +H PQ H A P
Sbjct: 240 RPASRSSSPGAKRRHSCAEALV---ALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
Query: 234 IAVKRVSLCSEALSN-------SEPPRV----PDPAP 259
+A V + +AL++ PP++ PDP+P
Sbjct: 297 VAGSAVIM--DALNSLATDSPCGIPPKMWKTSPDPSP 331
>gi|27886541 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform C [Homo sapiens]
Length = 925
Score = 32.3 bits (72), Expect = 0.44
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 177 RAPSQSASPSLPL---CAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQ 233
R S+S+SP CA+A + +LP A Q P P +H PQ H A P
Sbjct: 240 RPASRSSSPGAKRRHSCAEALV---ALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
Query: 234 IAVKRVSLCSEALSN-------SEPPRV----PDPAP 259
+A V + +AL++ PP++ PDP+P
Sbjct: 297 VAGSAVIM--DALNSLATDSPCGIPPKMWKTSPDPSP 331
>gi|209862843 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 isoform D [Homo sapiens]
Length = 901
Score = 32.3 bits (72), Expect = 0.44
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 177 RAPSQSASPSLPL---CAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQ 233
R S+S+SP CA+A + +LP A Q P P +H PQ H A P
Sbjct: 220 RPASRSSSPGAKRRHSCAEALV---ALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 276
Query: 234 IAVKRVSLCSEALSN-------SEPPRV----PDPAP 259
+A V + +AL++ PP++ PDP+P
Sbjct: 277 VAGSAVIM--DALNSLATDSPCGIPPKMWKTSPDPSP 311
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 32.3 bits (72), Expect = 0.44
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 177 RAPSQSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAV 236
R +P PL ++L+ + +++ SR P T P+ HP T+ +
Sbjct: 1082 RQDGSQEAPEAPL--SSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTP 1139
Query: 237 KRVSLCSEALSNSEPPRVPDP 257
K S + + +N + P+P
Sbjct: 1140 KPTSQATRSRTNRSSVKTPEP 1160
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 31.2 bits (69), Expect = 0.98
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 219 HRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPAPGNSQAA 265
HR P L PR A +PQ+ K VS S +PP P PAP A
Sbjct: 225 HRGPGL-PRAAGVPQVNSKLVSKRSRVF---QPPPPPPPAPSGDAPA 267
>gi|18699730 solute carrier family 16, member 10 [Homo sapiens]
Length = 515
Score = 31.2 bits (69), Expect = 0.98
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 201 PERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPAPG 260
P+ A+ ++++PL T P P + P+ AV++V + + +EP P+P G
Sbjct: 8 PDSARGTSEAQPLGPAPTGAAPPPGPGPSDSPEAAVEKVEVELAGPATAEPHEPPEPPEG 67
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 30.4 bits (67), Expect = 1.7
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 178 APSQSASPSL--PLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIA 235
AP+ SAS +L PL A Q A L P+L P P L +P +A
Sbjct: 1574 APASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMA 1633
Query: 236 VKRVSLCSEALSNSEPPRVPDPAPGNSQ 263
S A ++ P P AP ++Q
Sbjct: 1634 PSSTPGTSLASASPVPAPTPVLAPSSTQ 1661
Score = 28.9 bits (63), Expect = 4.8
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 169 GVGGVLVFRAPSQSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRT 228
GV ++V +AP +P PL + + LP + RP L P P L
Sbjct: 1307 GVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLP----AVLNPRPTLTPGRLPTPTLGTAR 1362
Query: 229 AQIPQIAVKRVSLCSEALSNSEPPRVPDPAPG 260
A +P + R L L +S P V APG
Sbjct: 1363 APMPTPTLVRPLL---KLVHSPSPEVSASAPG 1391
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 29.6 bits (65), Expect = 2.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 212 PLLL--PDTHRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDP 257
PL L P TH+CPQLH P+ +V + L E S VP P
Sbjct: 76 PLALSQPATHQCPQLH-----APRCSVHQCVLDQEKTKTSRGTPVPGP 118
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 179 PSQSAS-PSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHP-RTAQIPQIAV 236
P+ SA P+LP A A+ + S RA +++ P P+ RCP P R + +
Sbjct: 848 PANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGP 907
Query: 237 KRVSLCSEALSNSEPPRVPDP 257
R + + + P V DP
Sbjct: 908 GRAHSAGRSSYSPKVPPVKDP 928
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 29.6 bits (65), Expect = 2.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 212 PLLL--PDTHRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDP 257
PL L P TH+CPQLH P+ +V + L E S VP P
Sbjct: 76 PLALSQPATHQCPQLH-----APRCSVHQCVLDQEKTKTSRGAPVPGP 118
>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
sapiens]
Length = 233
Score = 29.3 bits (64), Expect = 3.7
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 15/101 (14%)
Query: 164 KGARGGVGGVLVFRAPSQSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQ 223
K A GV + Q+ASPS P CA+ QL ++ +S PL + PQ
Sbjct: 13 KPAASGVQSPTFHGSGRQTASPSPPRCAKTQLTPPAI--------RSCPLPPEEDLLTPQ 64
Query: 224 LHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPAPGNSQA 264
P++ + SL S PP P +P S+A
Sbjct: 65 -----GSAPRLLLGEASLTSPLA--LIPPSEPQHSPSKSRA 98
>gi|118918435 von Willebrand factor A domain containing 3B [Homo
sapiens]
Length = 1294
Score = 29.3 bits (64), Expect = 3.7
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 19/85 (22%)
Query: 192 QAQLQQASLPERAKSQNKSRPLLLP----------------DTH-RCPQLHP--RTAQIP 232
+A Q + P R K + K RP P +H C HP RTA +
Sbjct: 1191 EADTQDSREPRREKPRRKKRPAKQPLQQAAPSDSDGSSHGISSHGSCQGTHPEPRTAHLH 1250
Query: 233 QIAVKRVSLCSEALSNSEPPRVPDP 257
A R+ L S A+ + PPR P
Sbjct: 1251 FPAAGRLGLSSHAIIATPPPRAALP 1275
>gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma
[Homo sapiens]
Length = 189
Score = 29.3 bits (64), Expect = 3.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 65 AEKDDFSSPHSHSLLLVSLPEPHFELSEGLRLAFR 99
A +DF +SHS L LP P FE G +LA R
Sbjct: 28 ASPEDFKKSYSHSAL---LPHPPFEYHLGRKLALR 59
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 28.9 bits (63), Expect = 4.8
Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 29/154 (18%)
Query: 32 HFSAADSPGTEFTPATTTSRLLHVLYVCSCSLVAEKDDFSSPHSHSLLLVSLPEPHFELS 91
H S SP T T T + LL ++ +++ +P S P P+
Sbjct: 1987 HASVNASPKTALTGPTEGAVLLEKCKGSRAAMSLQEEAEPTP--------SPPSPN---R 2035
Query: 92 EGLRLAFRGSQSSDSIRYRRGGNEGVRPWRAGEVWLLGLLAAFQCAVAEHVNEAFL---- 147
E L LA + S R G+EG P RA L L A + A V +
Sbjct: 2036 ESLALALTAAHS-------RSGSEGRTPERASSPGLNKPLLATGDSPAPSVGDLAACAPS 2088
Query: 148 -SHSFHGAC------RRNPRMEPKGARGGVGGVL 174
+ + H C R +P P A+GG+GG L
Sbjct: 2089 PTSAAHMPCSLGPLPREDPLTSPSRAQGGLGGQL 2122
>gi|4757836 BRCA1 associated protein-1 [Homo sapiens]
Length = 729
Score = 28.9 bits (63), Expect = 4.8
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 196 QQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEP--PR 253
Q++ LPE +KS + PL+L + +R P A + C++A S+S P P+
Sbjct: 277 QESQLPEESKSASNKSPLVL-EANRAPA--ASEGNHTDGAEEAAGSCAQAPSHSPPNKPK 333
Query: 254 VPDPAPGNS 262
+ PG+S
Sbjct: 334 LVVKPPGSS 342
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 28.9 bits (63), Expect = 4.8
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 15/93 (16%)
Query: 166 ARGGVGGVLVFRAPSQSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLH 225
A GG++ P Q+ + L +Q Q Q L ++ + Q + P
Sbjct: 154 AAAAAGGIMTL--PLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPP------------- 198
Query: 226 PRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPA 258
P T Q PQ A + S + PP+ P PA
Sbjct: 199 PSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPA 231
>gi|38570115 zinc finger protein 362 [Homo sapiens]
Length = 420
Score = 28.9 bits (63), Expect = 4.8
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 185 PSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVSLCSE 244
P LP + A QQ L A +++ + LP + P LHP+ P +A+ S
Sbjct: 56 PHLPPTS-ASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATST 114
Query: 245 ALSNSEPPRVPDPAPGNSQA 264
R P + S A
Sbjct: 115 VTGLGLSTRTPSVSTSESSA 134
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 28.5 bits (62), Expect = 6.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 208 NKSRPLLLPDTHRCPQLHPRTAQIPQIAVKRVSLCSEALSNSEPPRVPDPAPGN 261
+ S P LP TH P A +P + + L S + S+P R P+ P N
Sbjct: 816 SSSLPAFLPTTHSPPGPQQPPASLPGLTAQ--PLLSPKEATSDPSRTPEEEPLN 867
>gi|134142822 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 28.5 bits (62), Expect = 6.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 153 GACRRNPRMEPKGARGGVGGVLVFRAPSQSASP 185
GA R P+ +P +R G+ GV + +P+Q+ +P
Sbjct: 163 GAFSRPPQRQPVSSRNGLRGVELEASPAQTGNP 195
>gi|27545332 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 28.5 bits (62), Expect = 6.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 153 GACRRNPRMEPKGARGGVGGVLVFRAPSQSASP 185
GA R P+ +P +R G+ GV + +P+Q+ +P
Sbjct: 163 GAFSRPPQRQPVSSRNGLRGVELEASPAQTGNP 195
>gi|187608784 transmembrane channel-like 6 [Homo sapiens]
Length = 805
Score = 28.5 bits (62), Expect = 6.3
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 123 GEVWLLGLLAAFQCAVAEHVNEAFLSHS 150
G VWLL L A CAVA HV F+ S
Sbjct: 435 GLVWLLCLGTALGCAVAVHVFSEFMIQS 462
>gi|187608791 transmembrane channel-like 6 [Homo sapiens]
Length = 805
Score = 28.5 bits (62), Expect = 6.3
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 123 GEVWLLGLLAAFQCAVAEHVNEAFLSHS 150
G VWLL L A CAVA HV F+ S
Sbjct: 435 GLVWLLCLGTALGCAVAVHVFSEFMIQS 462
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 28.5 bits (62), Expect = 6.3
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 179 PSQSASPSLPLCAQAQLQQASLPERAKSQNKSRPLLLPDTHRCPQLHPRTAQIPQIAVKR 238
PS +PSLP S P+ SQN PL L T P + + A+K
Sbjct: 1061 PSGLMNPSLPF--------TSSPDPTPSQN---PLSLMMTQMSKYAMPSSTPLYHNAIKT 1109
Query: 239 VSLCSEALSNSEPPRVPDPAPGNS 262
++ + L P P P P S
Sbjct: 1110 IATSDDELLPDRPLLPPPPPPQGS 1133
>gi|87252717 hypothetical protein LOC284618 [Homo sapiens]
Length = 236
Score = 28.5 bits (62), Expect = 6.3
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 16/59 (27%)
Query: 154 ACRRNPRMEPKGARGGVGGVLVFRAPSQSASPSLPLCAQAQLQQASLPERAKSQNKSRP 212
AC R PR P GA+ G GG L AQ L+ A+ P RA + S P
Sbjct: 177 ACPRLPRSPPGGAQSGRGGAL----------------AQPTLRCAAAPLRAWAWRSSDP 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,725,219
Number of Sequences: 37866
Number of extensions: 557203
Number of successful extensions: 1856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1833
Number of HSP's gapped (non-prelim): 40
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.