Guide to the Human Genome
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Name: ZNF133 Sequence: fasta or formatted (653aa) NCBI GI: 134142822
Description:

zinc finger protein 133

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [653aa] zinc finger protein 133
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         20           1
 C cysteine            6.0         39           1
 D aspartate           2.1         14           1
 E glutamate           7.4         48           2
 F phenylalanine       3.8         25           1
 G glycine             9.5         62           1
 H histidine           5.8         38           2
 I isoleucine          2.9         19           2
 K lysine              6.9         45           2
 L leucine             7.0         46           2
 M methionine          1.4          9           1
 N asparagine          2.8         18           1
 P proline             6.3         41           2
 Q glutamine           5.8         38           3
 R arginine            8.0         52           2
 S serine              9.2         60           2
 T threonine           5.1         33           2
 V valine              4.4         29           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 133 
ZNF133                1.000   zinc finger protein 133 
HKR1                  0.505   GLI-Kruppel family member HKR1 
ZNF169                0.434   zinc finger protein 169 
ZNF337                0.434   zinc finger protein 337 
ZNF343                0.426   zinc finger protein 343 
PRDM9                 0.426   PR domain containing 9 
ZNF615                0.391   zinc finger protein 615 
ZNF135                0.387   zinc finger protein 135 
ZNF184                0.385   zinc finger protein 184 
ZNF432                0.372   zinc finger protein 432 
ZNF160                0.371   zinc finger protein 160 
ZNF160                0.371   zinc finger protein 160 
ZNF160                0.371   zinc finger protein 160 
LOC100287429          0.364   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.364   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.364   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.364   zinc finger protein 84 
ZNF84                 0.364   zinc finger protein 84 
ZNF569                0.350   zinc finger protein 569 
ZNF12                 0.348   zinc finger protein 12 isoform b 
ZNF568                0.345   zinc finger protein 568 
ZNF182                0.345   zinc finger protein 21 isoform 2 
ZNF182                0.345   zinc finger protein 21 isoform 1 
ZNF624                0.345   zinc finger protein 624 
ZNF585B               0.344   zinc finger protein 585B 
ZNF268                0.343   zinc finger protein 268 
ZNF33B                0.342   zinc finger protein 33B 
ZNF484                0.342   zinc finger protein 484 isoform b 
ZNF484                0.342   zinc finger protein 484 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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