Search of human proteins with 239757584

Search of human proteins with 239757584

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757584 PREDICTED: similar to SH3-binding domain and
glutamic acid-rich protein [Homo sapiens]
         (218 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757584 PREDICTED: similar to SH3-binding domain and glutam...   445   e-125
gi|6677929 SH3-binding domain and glutamic acid-rich protein iso...   425   e-119
gi|48762712 SH3-binding domain and glutamic acid-rich protein is...   202   2e-52
gi|4506925 SH3 domain binding glutamic acid-rich protein like [H...   154   7e-38
gi|13899317 SH3 domain binding glutamic acid-rich protein like 2...   144   6e-35
gi|13775198 SH3 domain binding glutamic acid-rich protein like 3...    61   6e-10
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)...    37   0.013
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)...    37   0.013
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)...    37   0.013
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        35   0.038
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               35   0.049
gi|21735569 claspin [Homo sapiens]                                     34   0.11 
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    34   0.11 
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    33   0.14 
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    33   0.14 
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]     33   0.14 
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi...    33   0.19 
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    33   0.19 
gi|21361639 DIPB protein [Homo sapiens]                                33   0.25 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    33   0.25 
gi|7657465 podocalyxin-like 2 [Homo sapiens]                           32   0.32 
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              32   0.42 
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    32   0.55 
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    32   0.55 
gi|221316599 chromogranin B precursor [Homo sapiens]                   32   0.55 
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]              32   0.55 
gi|16554564 caspase recruitment domain family, member 6 [Homo sa...    32   0.55 
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]                31   0.71 
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]                 31   0.71 
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho...    31   0.71 

>gi|239757584 PREDICTED: similar to SH3-binding domain and glutamic
           acid-rich protein [Homo sapiens]
          Length = 218

 Score =  445 bits (1144), Expect = e-125
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 1   MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP 60
           MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP
Sbjct: 1   MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP 60

Query: 61  TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK 120
           TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK
Sbjct: 61  TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK 120

Query: 121 KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180
           KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA
Sbjct: 121 KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180

Query: 181 QKEGSEDVGNLPEAQEKNEEEGETATEEVRSTIFNSCA 218
           QKEGSEDVGNLPEAQEKNEEEGETATEEVRSTIFNSCA
Sbjct: 181 QKEGSEDVGNLPEAQEKNEEEGETATEEVRSTIFNSCA 218


>gi|6677929 SH3-binding domain and glutamic acid-rich protein
           isoform a [Homo sapiens]
          Length = 239

 Score =  425 bits (1093), Expect = e-119
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP 60
           MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP
Sbjct: 1   MPLLLLGETEPLKLERDCRSPVDPWAAASPDLALACLCHCQDLSSGAFPNRGVLGGVLFP 60

Query: 61  TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK 120
           TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK
Sbjct: 61  TVEMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEK 120

Query: 121 KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180
           KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA
Sbjct: 121 KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180

Query: 181 QKEGSEDVGNLPEAQEKNEEEGETATEE 208
           QKEGSEDVGNLPEAQEKNEEEGETATEE
Sbjct: 181 QKEGSEDVGNLPEAQEKNEEEGETATEE 208


>gi|48762712 SH3-binding domain and glutamic acid-rich protein
           isoform b [Homo sapiens]
          Length = 128

 Score =  202 bits (514), Expect = 2e-52
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 112 MRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEK 171
           MRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEK
Sbjct: 1   MRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEK 60

Query: 172 AEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           AEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE
Sbjct: 61  AEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 97


>gi|4506925 SH3 domain binding glutamic acid-rich protein like [Homo
           sapiens]
          Length = 114

 Score =  154 bits (388), Expect = 7e-38
 Identities = 70/107 (65%), Positives = 88/107 (82%)

Query: 64  MVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQ 123
           MVI+V++A+SSGS AI+KKQQ+V+GFLEANKI F+E DIA +E+NR+WMRENVP   +P 
Sbjct: 1   MVIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPA 60

Query: 124 NGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSE 170
            G PLPPQIFNE QY GD+D+FF A+E N +Y+FLGL  PP SK +E
Sbjct: 61  TGYPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTAPPGSKEAE 107


>gi|13899317 SH3 domain binding glutamic acid-rich protein like 2
           [Homo sapiens]
          Length = 107

 Score =  144 bits (363), Expect = 6e-35
 Identities = 67/104 (64%), Positives = 85/104 (81%)

Query: 64  MVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQ 123
           MVI+VF+A+SSG +AI+KKQQ+VV FLEANKI+F+E+DI   E+ R+WM +NVP EKKP 
Sbjct: 1   MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60

Query: 124 NGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSK 167
            G PLPPQIFN ++YCGD+DSFF +KE N ++SFLGL P   SK
Sbjct: 61  QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104


>gi|13775198 SH3 domain binding glutamic acid-rich protein like 3
           [Homo sapiens]
          Length = 93

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 66  IKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQNG 125
           ++V+  + +GS  I+ +Q EV   L+  +I ++ +DI+ D   R  MR      K     
Sbjct: 4   LRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRALAGNPKAT--- 60

Query: 126 IPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLA 161
              PPQI N +QYCGD++ F  A E+N +  FL LA
Sbjct: 61  ---PPQIVNGDQYCGDYELFVEAVEQNTLQEFLKLA 93


>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 121  KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180
            +P+  +PLP +   EE+   + +     +EE+   S +  A P DS  S + E     E 
Sbjct: 1212 EPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETE---TKEP 1268

Query: 181  QKEGSEDVGNLPEAQEKNEEEGETATE 207
            + E  E+   + E Q ++EEE +   E
Sbjct: 1269 EVEEEEEKPRVSEEQRQSEEEQQELEE 1295


>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 121  KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180
            +P+  +PLP +   EE+   + +     +EE+   S +  A P DS  S + E     E 
Sbjct: 1212 EPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETE---TKEP 1268

Query: 181  QKEGSEDVGNLPEAQEKNEEEGETATE 207
            + E  E+   + E Q ++EEE +   E
Sbjct: 1269 EVEEEEEKPRVSEEQRQSEEEQQELEE 1295


>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 121  KPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEA 180
            +P+  +PLP +   EE+   + +     +EE+   S +  A P DS  S + E     E 
Sbjct: 1212 EPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETE---TKEP 1268

Query: 181  QKEGSEDVGNLPEAQEKNEEEGETATE 207
            + E  E+   + E Q ++EEE +   E
Sbjct: 1269 EVEEEEEKPRVSEEQRQSEEEQQELEE 1295


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 160 LAP-PPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRSTI 213
           LAP  P + G E+ EE  E E ++E  E+     E +E+ EEE E   EE  + +
Sbjct: 722 LAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAV 776


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 165 DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGE 203
           D  G+EK E+  E E  K+G +  GN  + +EK E+E E
Sbjct: 160 DKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKE 198


>gi|21735569 claspin [Homo sapiens]
          Length = 1339

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 169 SEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRSTIFNS 216
           ++++EE GE + +KE  E+   L E +EK EEE E   +E    + +S
Sbjct: 639 TDESEEDGEEKVEKEEKEE--ELEEEEEKEEEEEEEGNQETAEFLLSS 684


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 161 APPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           AP PD KG +K   GG+ +  +  +E  G +P   E+ E  GE  TEE
Sbjct: 728 APVPDIKGDQKENPGGQEDVAE--AESTGEMP--GEEGETAGEGETEE 771



 Score = 31.2 bits (69), Expect = 0.71
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 165 DSKGSEKA--EEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           D KG E     +GG++E ++E  E+     E +E+ EEE E   EE
Sbjct: 844 DEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEE 889



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 167 KGSEKAEEGGETEAQKEG-SEDVGNLPEAQEKNEEEGETATE 207
           +G  + + GGET+ + EG +E  G   E +++NE EG+   E
Sbjct: 766 EGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNE 807



 Score = 28.5 bits (62), Expect = 4.6
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 166 SKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           S G +  EE  E E Q+E  E+     E +E+ EEE E   EE
Sbjct: 854 SDGGDSEEEEEEEEEQEEEEEEEEQ-EEEEEEEEEEEEKGNEE 895



 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 165 DSKGSEKAEEG-GETEAQKEGSEDVGNLPEAQEKNEEEGETATE 207
           +  G E   EG GETE Q +G E+  +  EA+ K + EGE   E
Sbjct: 771 EKSGGETQPEGEGETETQGKG-EECEDENEAEGKGDNEGEDEGE 813


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 13/64 (20%)

Query: 158  LGLAPPPDSKGS----------EKAEEGGETEAQKEGSEDVGNLPEAQE---KNEEEGET 204
            LGL    DSK S          E+ EEGG    ++ G+E   N PE +E    +++EGE 
Sbjct: 1011 LGLVNDKDSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEE 1070

Query: 205  ATEE 208
              EE
Sbjct: 1071 EEEE 1074


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 13/64 (20%)

Query: 158  LGLAPPPDSKGS----------EKAEEGGETEAQKEGSEDVGNLPEAQE---KNEEEGET 204
            LGL    DSK S          E+ EEGG    ++ G+E   N PE +E    +++EGE 
Sbjct: 1011 LGLVNDKDSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEE 1070

Query: 205  ATEE 208
              EE
Sbjct: 1071 EEEE 1074


>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
          Length = 569

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)

Query: 167 KGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           K  EK EE  E   QKE  E++ N      KNEEEGE+  EE
Sbjct: 389 KKEEKEEEEEEEMKQKEEEEEIRN------KNEEEGESKDEE 424


>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
           sapiens]
          Length = 631

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 141 DFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEE 200
           DF+ F  + E    Y  +G       + +E+ EE  + E Q+EG E+     E +E+ EE
Sbjct: 89  DFEHFLMSGESLFHYPLVG------EEETEREEE--DEEIQEEGGEEEEEEEEEEEEEEE 140

Query: 201 EGETATEEVRS 211
           E E   E+ R+
Sbjct: 141 EEEEEEEQPRA 151


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 165 DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           + KG E+ EE GE E + E  E  G   E + + EEEGE   EE
Sbjct: 855 EGKGEEEGEE-GEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEE 897



 Score = 31.6 bits (70), Expect = 0.55
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)

Query: 84  QEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQNGIPLPPQIFNEEQYCGDFD 143
           +EV G  E  + + K+ + AG E+      +   GE++   G     +   E +  G+ +
Sbjct: 762 EEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEG-GEVE 820

Query: 144 SFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEE-EG 202
                +EE       G     + +G E+  EG E E + +G E+ G   E +E+ EE EG
Sbjct: 821 EGKGEREEE---EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEE-GEEGEGEEEGEEGEG 876

Query: 203 ETATEE 208
           E   EE
Sbjct: 877 EGEEEE 882



 Score = 31.6 bits (70), Expect = 0.55
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 165 DSKGSEKAEEG-GETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           + +G E+  EG GE E + EG E+ G     +E  E EGE   EE
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936



 Score = 31.2 bits (69), Expect = 0.71
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)

Query: 165 DSKGSEKAEEG--------GETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           + +G E+ EEG        GE E ++EG E  G   E + + EEEGE   EE
Sbjct: 864 EGEGEEEGEEGEGEGEEEEGEGEGEEEG-EGEGEEEEGEGEGEEEGEGEGEE 914



 Score = 31.2 bits (69), Expect = 0.71
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 165  DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATE 207
            + +G E+ E  GE E + EG E+ G     +E+ EEEGE   E
Sbjct: 963  EGEGEEEGEGEGE-EGEGEGEEEEGEGEGEEEEGEEEGEEEGE 1004



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 23/105 (21%)

Query: 104  GDEDNRRWMRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPP 163
            G+E+   W  E   GE +             EE+  G+ +      EE       G    
Sbjct: 948  GEEEEGEWEGEEEEGEGE------------GEEEGEGEGEEGEGEGEEEE-----GEGEG 990

Query: 164  PDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
             + +G E+ EE GE E + EG        E +E+ E EGE   EE
Sbjct: 991  EEEEGEEEGEEEGEGEEEGEGEG------EEEEEGEVEGEVEGEE 1029



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 6/44 (13%)

Query: 165  DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
            + +G  + EE GE E + EG E  G      E  EEEGE   EE
Sbjct: 1008 EGEGEGEEEEEGEVEGEVEGEEGEG------EGEEEEGEEEGEE 1045



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 165 DSKGSEKAE-EGGETEAQKEGSED---VGNLPEAQEKNEEEGETATEE 208
           + +G E+ E EG E E + EG E+    G   E + K EEEGE    E
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE 931



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 15/59 (25%)

Query: 165 DSKGSEKAEEG---------------GETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           + KG E+ EEG               GE E ++E  E  G   E + + EEEGE   EE
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEE 976



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 165  DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
            + +  E  EEG E E + EG E+  N  E +E+  +  ET  EE
Sbjct: 1033 EGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEE 1076



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 169 SEKAEEGGETEAQKEGSEDVGNLPEAQEK---NEEEGE 203
           +++ EEGGE E   EG E+ G+  E +EK    +EEGE
Sbjct: 724 NQEMEEGGEEE-HGEGEEEEGDREEEEEKEGEGKEEGE 760


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 145 FFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNE--EEG 202
           F S      ++      PP D +G+ K E   + E ++E   + G   E++E++E  EE 
Sbjct: 52  FLSHHLAEYVHGSQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEES 111

Query: 203 ETATE 207
           ET  E
Sbjct: 112 ETEEE 116



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 165 DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           +S+   ++EE  ETE + E   D  +  +++E+ E+E E+  EE
Sbjct: 100 ESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEE 143



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 165 DSKGSEKAEEGGETEAQKEGSEDVGNLPE--AQEKNEEEGETATE 207
           +S+  E++E+  + E++++  E++ +  E  A+E N+EEGE+  E
Sbjct: 110 ESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAE 154



 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 165 DSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEE 208
           +S+  E++E   E+E+++E   +  +  E+ E++EE+ E   E+
Sbjct: 92  ESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMED 135


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 173 EEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRSTIFNS 216
           EE  E E ++E  E+ G L E +E+ +EE E   EEV    F +
Sbjct: 924 EEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGT 967


>gi|7657465 podocalyxin-like 2 [Homo sapiens]
          Length = 605

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 32/111 (28%)

Query: 117 PGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGG 176
           P E+  ++ I  PPQ F EE             EE +  S L L P  D    +  E+ G
Sbjct: 82  PSEENEESRILQPPQYFWEE-------------EEELNDSSLDLGPTADYVFPDLTEKAG 128

Query: 177 ETEAQKEGSEDVGNLP------------------EAQEKNEEEGETATEEV 209
             E   + ++++ NLP                  E +E+ EEE E   EEV
Sbjct: 129 SIEDTSQ-AQELPNLPSPLPKMNLVEPPWHMPPREEEEEEEEEEEREKEEV 178


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 164  PDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRST 212
            P+++G  + E  GET+ +K+GS  V +L + Q +   E  +   E R T
Sbjct: 2231 PEAEGEAQPESEGETQGEKKGSPQV-SLGDGQSEEASESSSPVPEDRPT 2278



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 159  GLAPPPDSKGSEKAEEGGE---TEAQKEGSEDVGNLPEAQEKNEE-EGETATEE 208
            G+   P S+G E  E  GE   TE   +   D    PEA+E+ +E EGE    E
Sbjct: 2022 GVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAE 2075



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 164  PDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEE-EGETATEEVR 210
            P+S+G E  E  GE + + EG E      EAQ ++E  E + A EE +
Sbjct: 2127 PESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQ 2174



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 164  PDSKGSEKAEEGGETEAQKEG------SEDVGNLPEAQEKNEEEGETATEEVRST 212
            P+S+G E  E  GE + + EG       E+    PE  E  E EGE   E    T
Sbjct: 2191 PESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGET 2245


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 11/49 (22%)

Query: 165 DSKGSEKAEEG----GETEAQKEGSEDVGNLPEAQEKNEEEGETATEEV 209
           + +GS + EEG    GETEA+ EG        EA+ K E++ E  +EEV
Sbjct: 554 EKEGSSEKEEGEQEEGETEAEAEGE-------EAEAKEEKKVEEKSEEV 595



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 170 EKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATE 207
           E+ +EG +++  +EG  +     E +E  +EEGET  E
Sbjct: 537 EEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE 574



 Score = 28.1 bits (61), Expect = 6.0
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 63  EMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKP 122
           E V +V   T S  + + K+ +E    L+  K    E + AG E        +   +   
Sbjct: 741 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEK----EKEKAGGEGGSEEEGSDKGAKGSR 796

Query: 123 QNGIPLPPQIFNEEQYCGDFDSFFSAKEEN--IIYSFLGLAPPPDSKGSEKAEEGG---- 176
           +  I +  ++  +E+   +     S +EE   ++ + L L+P  + KG +K+EE      
Sbjct: 797 KEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTK 856

Query: 177 -----ETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRST 212
                 +E     ++ +       +K EE  ET  E++ ST
Sbjct: 857 TVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVST 897


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 11/49 (22%)

Query: 165 DSKGSEKAEEG----GETEAQKEGSEDVGNLPEAQEKNEEEGETATEEV 209
           + +GS + EEG    GETEA+ EG        EA+ K E++ E  +EEV
Sbjct: 178 EKEGSSEKEEGEQEEGETEAEAEGE-------EAEAKEEKKVEEKSEEV 219



 Score = 30.8 bits (68), Expect = 0.93
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 170 EKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATE 207
           E+ +EG +++  +EG  +     E +E  +EEGET  E
Sbjct: 161 EEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE 198



 Score = 28.1 bits (61), Expect = 6.0
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 63  EMVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKP 122
           E V +V   T S  + + K+ +E    L+  K    E + AG E        +   +   
Sbjct: 365 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEK----EKEKAGGEGGSEEEGSDKGAKGSR 420

Query: 123 QNGIPLPPQIFNEEQYCGDFDSFFSAKEEN--IIYSFLGLAPPPDSKGSEKAEEGG---- 176
           +  I +  ++  +E+   +     S +EE   ++ + L L+P  + KG +K+EE      
Sbjct: 421 KEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTK 480

Query: 177 -----ETEAQKEGSEDVGNLPEAQEKNEEEGETATEEVRST 212
                 +E     ++ +       +K EE  ET  E++ ST
Sbjct: 481 TVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVST 521


>gi|221316599 chromogranin B precursor [Homo sapiens]
          Length = 677

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 166 SKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGETATEEV 209
           S+     E G ET +Q+   ++    P +QE++EE  E AT EV
Sbjct: 231 SREKSSQESGEETGSQENHPQESKGQPRSQEESEEGEEDATSEV 274


>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
          Length = 587

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 160 LAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEGE 203
           LA   D +  E+ EEG E E + E  E+     E +E+ EEE E
Sbjct: 354 LASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEE 397


>gi|16554564 caspase recruitment domain family, member 6 [Homo
           sapiens]
          Length = 1037

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)

Query: 135 EEQYCGDFDSFFSAKE--ENIIYS---FLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVG 189
           +E+Y G  D+   A+   E  +Y     +G     D + SE  E  GE E   EGSE   
Sbjct: 211 KEEYLGSVDTPEDAEATVEEEVYDDPEHVGYDGEEDFENSETTEFSGE-EPSYEGSETSL 269

Query: 190 NLPEAQEKNEEEGETATEEV 209
           +L E QEK+ EE +   ++V
Sbjct: 270 SLEEEQEKSIEERKKVFKDV 289


>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
          Length = 755

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)

Query: 79  IRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQNGIPLPPQIFNEEQY 138
           + K+ +E VG  + ++ D  E +   DED           EK+ ++G     + F E   
Sbjct: 525 LNKESEEEVGPTKESEEDDSEKE--SDEDC---------SEKQSEDG---SEREFEENGL 570

Query: 139 CGDFDSFFSAKE--ENIIYSFLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQE 196
             D D   S KE  EN++   L      DS+ SE  ++G E    +EGSE      E  +
Sbjct: 571 EKDLDEEGSEKELHENVLDKEL---EENDSENSEFEDDGSEKVLDEEGSE--REFDEDSD 625

Query: 197 KNEEEGET 204
           + EEE +T
Sbjct: 626 EKEEEEDT 633



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 163 PPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEG--ETATEE 208
           P D K  EK E+GGE E   EG+ +      + EK  EEG  E  +EE
Sbjct: 425 PIDEKKFEKTEDGGEFE---EGASENNAKESSPEKEAEEGCPEKESEE 469


>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
          Length = 755

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)

Query: 79  IRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQNGIPLPPQIFNEEQY 138
           + K+ +E VG  + ++ D  E +   DED           EK+ ++G     + F E   
Sbjct: 525 LNKESEEEVGPTKESEEDDSEKE--SDEDC---------SEKQSEDG---SEREFEENGL 570

Query: 139 CGDFDSFFSAKE--ENIIYSFLGLAPPPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQE 196
             D D   S KE  EN++   L      DS+ SE  ++G E    +EGSE      E  +
Sbjct: 571 EKDLDEEGSEKELHENVLDKEL---EENDSENSEFEDDGSEKVLDEEGSE--REFDEDSD 625

Query: 197 KNEEEGET 204
           + EEE +T
Sbjct: 626 EKEEEEDT 633



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 163 PPDSKGSEKAEEGGETEAQKEGSEDVGNLPEAQEKNEEEG--ETATEE 208
           P D K  EK E+GGE E   EG+ +      + EK  EEG  E  +EE
Sbjct: 425 PIDEKKFEKTEDGGEFE---EGASENNAKESSPEKEAEEGCPEKESEE 469


>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
           sapiens]
          Length = 1806

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 124 NGIPL-PPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSKGSEKAEEGGETEAQK 182
           NGI +   +I +EE + GD   F    +    Y +     P     + KA +  E +  +
Sbjct: 201 NGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEPQIDE 260

Query: 183 EGSEDV-------GNLPEAQEKNEEEGETATEE 208
              ED+       G     + ++  EG T TEE
Sbjct: 261 YAPEDIIEYDYEYGEAEYKEAESVTEGPTVTEE 293


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,709,169
Number of Sequences: 37866
Number of extensions: 483303
Number of successful extensions: 2621
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 2129
Number of HSP's gapped (non-prelim): 479
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.