Guide to the Human Genome
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Name: SH3BGRL3 Sequence: fasta or formatted (93aa) NCBI GI: 13775198
Description:

SH3 domain binding glutamic acid-rich protein like 3

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5          6           1
 C cysteine            1.1          1           1
 D aspartate           6.5          6           1
 E glutamate           7.5          7           1
 F phenylalanine       2.2          2           1
 G glycine             6.5          6           1
 H histidine           0.0          0           0
 I isoleucine          5.4          5           1
 K lysine              4.3          4           1
 L leucine             9.7          9           1
 M methionine          2.2          2           1
 N asparagine          4.3          4           1
 P proline             3.2          3           2
 Q glutamine           9.7          9           2
 R arginine            6.5          6           1
 S serine              7.5          7           1
 T threonine           5.4          5           1
 V valine              7.5          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            4.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain binding glutamic acid-rich protein like 3... 
SH3BGRL2              0.296   SH3 domain binding glutamic acid-rich protein like 2...
LOC100291671          0.226   PREDICTED: similar to SH3-binding domain and glutam...
SH3BGR                0.226   SH3-binding domain and glutamic acid-rich protein iso...
SH3BGRL               0.201   SH3 domain binding glutamic acid-rich protein like [H...
SH3BGR                0.113   SH3-binding domain and glutamic acid-rich protein is...
MAML2                 0.013   mastermind-like 2 
DDR1                  0.013   discoidin domain receptor family, member 1 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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