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Search of human proteins with 119372315
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119372315 xin actin-binding repeat containing 2 isoform 2
[Homo sapiens]
(938 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Ho... 1901 0.0
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 783 0.0
gi|165905589 LIM domain and actin binding 1 isoform a [Homo sapi... 222 1e-57
gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens] 221 2e-57
gi|165905591 LIM domain and actin binding 1 isoform c [Homo sapi... 210 6e-54
gi|13386490 LIM domain containing 2 [Homo sapiens] 140 6e-33
gi|209862793 microtubule associated monoxygenase, calponin and L... 68 3e-11
gi|170172518 microtubule associated monoxygenase, calponin and L... 64 9e-10
gi|209862789 microtubule associated monoxygenase, calponin and L... 64 9e-10
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 58 4e-08
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 53 2e-06
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 52 3e-06
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 52 3e-06
gi|205360947 microtubule associated monoxygenase, calponin and L... 52 3e-06
gi|226530313 microtubule associated monoxygenase, calponin and L... 52 3e-06
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 52 3e-06
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 51 4e-06
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 51 6e-06
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 50 1e-05
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 47 6e-05
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 47 6e-05
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 47 8e-05
gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens] 47 1e-04
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 47 1e-04
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 45 3e-04
gi|46049105 nebulin-related anchoring protein isoform S [Homo sa... 45 3e-04
gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens] 44 0.001
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 42 0.002
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 42 0.003
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 42 0.003
>gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Homo
sapiens]
Length = 938
Score = 1901 bits (4924), Expect = 0.0
Identities = 938/938 (100%), Positives = 938/938 (100%)
Query: 1 MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT 60
MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT
Sbjct: 1 MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT 60
Query: 61 SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV 120
SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV
Sbjct: 61 SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV 120
Query: 121 FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES 180
FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES
Sbjct: 121 FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES 180
Query: 181 GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA 240
GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA
Sbjct: 181 GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA 240
Query: 241 NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS 300
NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS
Sbjct: 241 NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS 300
Query: 301 QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV 360
QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV
Sbjct: 301 QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV 360
Query: 361 STKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQKTVYPMECLVADKQ 420
STKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQKTVYPMECLVADKQ
Sbjct: 361 STKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQKTVYPMECLVADKQ 420
Query: 421 NFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSKGNYDEGFGHKQHKDRWNCK 480
NFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSKGNYDEGFGHKQHKDRWNCK
Sbjct: 421 NFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSKGNYDEGFGHKQHKDRWNCK 480
Query: 481 NQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLDAGNSEGQRNDLRKLGERGKLKVIWP 540
NQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLDAGNSEGQRNDLRKLGERGKLKVIWP
Sbjct: 481 NQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLDAGNSEGQRNDLRKLGERGKLKVIWP 540
Query: 541 PSKEIPKKTLPFEEELKMSKPKWPPEMTTLLSPEFKSESLLEDVRTPENKGQRQDHFPFL 600
PSKEIPKKTLPFEEELKMSKPKWPPEMTTLLSPEFKSESLLEDVRTPENKGQRQDHFPFL
Sbjct: 541 PSKEIPKKTLPFEEELKMSKPKWPPEMTTLLSPEFKSESLLEDVRTPENKGQRQDHFPFL 600
Query: 601 QPYLQSTHVCQKEDVIGIKEMKMPEGRKDEKKEGRKNVQDRPSEAEDTKSNRKSAMDLND 660
QPYLQSTHVCQKEDVIGIKEMKMPEGRKDEKKEGRKNVQDRPSEAEDTKSNRKSAMDLND
Sbjct: 601 QPYLQSTHVCQKEDVIGIKEMKMPEGRKDEKKEGRKNVQDRPSEAEDTKSNRKSAMDLND 660
Query: 661 NNNVIVQSAEKEKNEKTNQTNGAEVLQVTNTDDEMMPENHKENLNKNNNNNYVAVSYLNN 720
NNNVIVQSAEKEKNEKTNQTNGAEVLQVTNTDDEMMPENHKENLNKNNNNNYVAVSYLNN
Sbjct: 661 NNNVIVQSAEKEKNEKTNQTNGAEVLQVTNTDDEMMPENHKENLNKNNNNNYVAVSYLNN 720
Query: 721 CRQKTSILEFLDLLPLSSEANDTANEYEIEKLENTSRISELLGIFESEKTYSRNVLAMAL 780
CRQKTSILEFLDLLPLSSEANDTANEYEIEKLENTSRISELLGIFESEKTYSRNVLAMAL
Sbjct: 721 CRQKTSILEFLDLLPLSSEANDTANEYEIEKLENTSRISELLGIFESEKTYSRNVLAMAL 780
Query: 781 KKQTDRAAAGSPVQPAPKPSLSRGLMVKGGSSIISPDTNLLNIKGSHSKSKNLHFFFSNT 840
KKQTDRAAAGSPVQPAPKPSLSRGLMVKGGSSIISPDTNLLNIKGSHSKSKNLHFFFSNT
Sbjct: 781 KKQTDRAAAGSPVQPAPKPSLSRGLMVKGGSSIISPDTNLLNIKGSHSKSKNLHFFFSNT 840
Query: 841 VKITAFSKKNENIFNCDLIDSVDQIKNMPCLDLREFGKDVKPWHVETTEAARNNENTGFD 900
VKITAFSKKNENIFNCDLIDSVDQIKNMPCLDLREFGKDVKPWHVETTEAARNNENTGFD
Sbjct: 841 VKITAFSKKNENIFNCDLIDSVDQIKNMPCLDLREFGKDVKPWHVETTEAARNNENTGFD 900
Query: 901 ALSHECTAKPLFPRVEVQSEQLTVEEQIKRNRCYSDTE 938
ALSHECTAKPLFPRVEVQSEQLTVEEQIKRNRCYSDTE
Sbjct: 901 ALSHECTAKPLFPRVEVQSEQLTVEEQIKRNRCYSDTE 938
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 783 bits (2022), Expect = 0.0
Identities = 392/392 (100%), Positives = 392/392 (100%)
Query: 1 MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT 60
MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT
Sbjct: 1 MFPMQKGSLNLLRQKWESCDYQRSECHPRDSHCTIFQPQESKLLAPEGEVVSAPQSLDPT 60
Query: 61 SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV 120
SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV
Sbjct: 61 SLPYSTGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKEDSLSSRRRIERFSIALDELRSV 120
Query: 121 FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES 180
FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES
Sbjct: 121 FEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDSVKDSDKKGKETSFDKMSPES 180
Query: 181 GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA 240
GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA
Sbjct: 181 GHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCRSFSA 240
Query: 241 NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS 300
NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS
Sbjct: 241 NMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSS 300
Query: 301 QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV 360
QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV
Sbjct: 301 QEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDEEIPKV 360
Query: 361 STKLLKEQFEKSAQEKILYSDKEMTTPAKQIK 392
STKLLKEQFEKSAQEKILYSDKEMTTPAKQIK
Sbjct: 361 STKLLKEQFEKSAQEKILYSDKEMTTPAKQIK 392
>gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
Length = 760
Score = 222 bits (566), Expect = 1e-57
Identities = 204/734 (27%), Positives = 310/734 (42%), Gaps = 166/734 (22%)
Query: 5 QKGSLNLLRQKWE----------------SCDYQRSECHPR---DSHCTI-FQPQESKLL 44
+KG+L +L++KWE S + + HP SH + + + +
Sbjct: 65 RKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQEEQI 124
Query: 45 APEGEVVSAPQSLDPTSLPY-STGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKED---S 100
P + S P++L P+ GE++ E K K N R EV K + +
Sbjct: 125 HPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESK----KMENCLGESRHEVEKSEISEN 180
Query: 101 LSSRRRIERFSIALDELRSVFEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDS 160
+ +IE++++ L+ L+ +FE + + +I R+ A
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEP---------TQTKILRAQSRSA------------ 219
Query: 161 VKDSDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLK 220
S +K E S+ E G ++ +T K ES R + L E S+K
Sbjct: 220 ---SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIK 268
Query: 221 ERMARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQH 280
+RMA+YQAAVS+ +S S N E + GG K+ K
Sbjct: 269 DRMAKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKM------------------- 303
Query: 281 QNRSEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQF 340
E N G +V ++H E N+ S
Sbjct: 304 ---------------------EQKENVPPGPEV---------CITHQEGEKISANENSL- 332
Query: 341 HQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTT-----PAKQIKKLL 395
V TP +++ P S +K + ++ K L D ++ P K +KK
Sbjct: 333 ------AVRSTPAEDDSPGDSQ--VKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQ 384
Query: 396 LQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFK 455
+E C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF
Sbjct: 385 APARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFN 444
Query: 456 QLFKSKGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD 515
QLFKSKGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 445 QLFKSKGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIA 500
Query: 516 ---------AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPE 566
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE
Sbjct: 501 KVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE 560
Query: 567 MTTLLSPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC--------------- 610
+ PE + L+ + + ++ PF + QST V
Sbjct: 561 -DEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSM 619
Query: 611 --QKEDVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNN 663
Q E+ +G + E K E K KK G+ Q++ S+ E K +++ +N N
Sbjct: 620 SEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENEN 679
Query: 664 VIVQSAEKEKNEKT 677
++ A+ ++++ +
Sbjct: 680 LVENGADSDEDDNS 693
>gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens]
Length = 759
Score = 221 bits (564), Expect = 2e-57
Identities = 203/729 (27%), Positives = 308/729 (42%), Gaps = 157/729 (21%)
Query: 5 QKGSLNLLRQKWE----------------SCDYQRSECHPR---DSHCTI-FQPQESKLL 44
+KG+L +L++KWE S + + HP SH + + + +
Sbjct: 65 RKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQEEQI 124
Query: 45 APEGEVVSAPQSLDPTSLPY-STGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKED---S 100
P + S P++L P+ GE++ E K K N R EV K + +
Sbjct: 125 HPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESK----KMENCLGESRHEVEKSEISEN 180
Query: 101 LSSRRRIERFSIALDELRSVFEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDS 160
+ +IE++++ L+ L+ +FE + + +I R+ A
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEP---------TQTKILRAQSRSA------------ 219
Query: 161 VKDSDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLK 220
S +K E S+ E G ++ +T K ES R + L E S+K
Sbjct: 220 ---SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIK 268
Query: 221 ERMARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQH 280
+RMA+YQAAVS+ +S S N E + GG K+ K + E
Sbjct: 269 DRMAKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKMEQKENVPP----------- 311
Query: 281 QNRSEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQF 340
E+ QEG K+ + ++ E+ ++ SQ
Sbjct: 312 -------------------GPEVCITHQEGEKISANE----NSLAVRSTPAEDDSRDSQV 348
Query: 341 HQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKE 400
VQ+ V P P L E ++P K +KK +E
Sbjct: 349 KSEVQQPVHPKPLS---PDSRASSLSE-----------------SSPPKAMKKFQAPARE 388
Query: 401 ICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKS 460
C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF QLFKS
Sbjct: 389 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKS 448
Query: 461 KGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD----- 515
KGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 449 KGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIAKVGVL 504
Query: 516 ----AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPEMTTLL 571
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE +
Sbjct: 505 AASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE-DEIS 563
Query: 572 SPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC-----------------QKE 613
PE + L+ + + ++ PF + QST V Q E
Sbjct: 564 KPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSE 623
Query: 614 DVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNNVIVQS 668
+ +G + E K E K KK G+ Q++ S+ E K +++ +N N++
Sbjct: 624 ESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENG 683
Query: 669 AEKEKNEKT 677
A+ ++++ +
Sbjct: 684 ADSDEDDNS 692
>gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
Length = 600
Score = 210 bits (534), Expect = 6e-54
Identities = 168/551 (30%), Positives = 242/551 (43%), Gaps = 114/551 (20%)
Query: 164 SDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERM 223
S +K E S+ E G ++ +T K ES R + L E S+K+RM
Sbjct: 60 SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIKDRM 111
Query: 224 ARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNR 283
A+YQAAVS+ +S S N E + GG K+ K
Sbjct: 112 AKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKM---------------------- 143
Query: 284 SEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQY 343
E N G +V ++H E N+ S
Sbjct: 144 ------------------EQKENVPPGPEV---------CITHQEGEKISANENSL---- 172
Query: 344 VQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTT-----PAKQIKKLLLQD 398
V TP +++ P S +K + ++ K L D ++ P K +KK
Sbjct: 173 ---AVRSTPAEDDSPGDSQ--VKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPA 227
Query: 399 KEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLF 458
+E C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF QLF
Sbjct: 228 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
Query: 459 KSKGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD--- 515
KSKGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 288 KSKGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIAKVG 343
Query: 516 ------AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPEMTT 569
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE
Sbjct: 344 VLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE-DE 402
Query: 570 LLSPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC-----------------Q 611
+ PE + L+ + + ++ PF + QST V Q
Sbjct: 403 ISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQ 462
Query: 612 KEDVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNNVIV 666
E+ +G + E K E K KK G+ Q++ S+ E K +++ +N N++
Sbjct: 463 SEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVE 522
Query: 667 QSAEKEKNEKT 677
A+ ++++ +
Sbjct: 523 NGADSDEDDNS 533
>gi|13386490 LIM domain containing 2 [Homo sapiens]
Length = 127
Score = 140 bits (353), Expect = 6e-33
Identities = 62/84 (73%), Positives = 69/84 (82%)
Query: 394 LLLQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPH 453
L Q KE C CQKTVYPME LVADK FH SCF C HC++KLSLG+YA+LHG+ YCKPH
Sbjct: 32 LRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPH 91
Query: 454 FKQLFKSKGNYDEGFGHKQHKDRW 477
F+QLFKSKGNYDEGFG KQHK+ W
Sbjct: 92 FQQLFKSKGNYDEGFGRKQHKELW 115
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 68.2 bits (165), Expect = 3e-11
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 365 LKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQKTVYPMECLVADKQNFHK 424
+ Q ++ Q K L KE+ + K+ + L + C CQK VY ME L A+ + FH+
Sbjct: 852 IANQLQRKEQPKALLDKKELGSMKKEFPQNL-GGSDTCYFCQKRVYVMERLSAEGKFFHR 910
Query: 425 SCFRCHHCNSKLSLGNYA--SLHGQIYCKPHF 454
SCF+C +C + L L YA G+ YCKPH+
Sbjct: 911 SCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 942
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 63.5 bits (153), Expect = 9e-10
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 297 SRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDE- 355
S+ Q ++R K +K D+ G + EE +A + H+ + T++ T D
Sbjct: 655 SKLGQTISRKRSPKDKKEK-DLDGAGKRRKTSQSEEE--EAPRGHRGERPTLVSTLTDRR 711
Query: 356 ---------EIPKVSTKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQ 406
++ ++T+LL + FE++A + + ++ + + + L + C CQ
Sbjct: 712 MDVAVGNQNKVKYMATQLLAK-FEENAPAQSIGIRRQGSMKKEFPQNL--GGSDTCYFCQ 768
Query: 407 KTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYA--SLHGQIYCKPHF 454
K VY ME L A+ + FH+SCF+C +C + L L YA G+ YCKPH+
Sbjct: 769 KRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 63.5 bits (153), Expect = 9e-10
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 297 SRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQYVQETVIDTPEDE- 355
S+ Q ++R K +K D+ G + EE +A + H+ + T++ T D
Sbjct: 655 SKLGQTISRKRSPKDKKEK-DLDGAGKRRKTSQSEEE--EAPRGHRGERPTLVSTLTDRR 711
Query: 356 ---------EIPKVSTKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICILCQ 406
++ ++T+LL + FE++A + + ++ + + + L + C CQ
Sbjct: 712 MDVAVGNQNKVKYMATQLLAK-FEENAPAQSIGIRRQGSMKKEFPQNL--GGSDTCYFCQ 768
Query: 407 KTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYA--SLHGQIYCKPHF 454
K VY ME L A+ + FH+SCF+C +C + L L YA G+ YCKPH+
Sbjct: 769 KRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 58.2 bits (139), Expect = 4e-08
Identities = 66/292 (22%), Positives = 116/292 (39%), Gaps = 26/292 (8%)
Query: 187 EATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERMARYQAAVSRGDCR-----SFSAN 241
EAT P+ P G + +L +V + E ++R A ++ D + +F+
Sbjct: 767 EATPSPSPPLKRQFPSVVVTGHVLRELKQVSAGSECLSRPWRARAKSDLQLGGTENFATL 826
Query: 242 MMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNRSEQEAIHSSQVGTSRSSQ 301
A+ G L ++++ E + A ++ +N E+ A +S G Q
Sbjct: 827 PSTRPRAQALSGVLWRLQQVEEKILQKRAQNLANREFHTKNIKEKAAHLASMFGHGDFPQ 886
Query: 302 EMARNE--------QEGSKVQKIDVHGTEMVSHLEKHT---EEVNQASQFHQYVQETVID 350
++ S++ D + S ++ + +E S FH +
Sbjct: 887 NKLLSKGLSHTHPPSPPSRLPSPDPAASSSPSTVDSASPARKEKKSPSGFHFHPSHLRTV 946
Query: 351 TPEDEEIPKVST------KLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKEICIL 404
P+ + KVS+ ++L + + K + ++ + K L L + C
Sbjct: 947 HPQ-LTVGKVSSGIGAAAEVLVNLYMNDHRPKAQATSPDLESMRKSFP-LNLGGSDTCYF 1004
Query: 405 CQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYA--SLHGQIYCKPHF 454
C+K VY ME L A+ FH+ CFRC C + L L Y G+ YCKPHF
Sbjct: 1005 CKKRVYVMERLSAEGHFFHRECFRCSICATTLRLAAYTFDCDEGKFYCKPHF 1056
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 52.8 bits (125), Expect = 2e-06
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 400 EICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFK 459
E C C + VY E ++ +++HK+CFRC C L A G+IYCK + + F
Sbjct: 117 ERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFG 176
Query: 460 SKG-NYDEGFGHKQHKD 475
KG + +G G H +
Sbjct: 177 PKGFGFGQGAGALVHSE 193
Score = 50.8 bits (120), Expect = 6e-06
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
C +CQKTVY E + + +FHKSCF C C L A +IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 462 G-NYDEGFG 469
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 52.0 bits (123), Expect = 3e-06
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
C C+KTVY E + + ++FHK+CF C C L A+ +IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 462 G-NYDEGFG 469
G Y +G G
Sbjct: 70 GIGYGQGAG 78
Score = 48.9 bits (115), Expect = 2e-05
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 398 DKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQL 457
+ E C C K+VY E ++ + +HK+CFRC C L N G++YCK + +
Sbjct: 116 ESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKN 175
Query: 458 FKSKGNYDEGFG 469
F G GFG
Sbjct: 176 FGPTG---IGFG 184
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 52.0 bits (123), Expect = 3e-06
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
C C+KTVY E + + ++FHK+CF C C L A+ +IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 462 G-NYDEGFG 469
G Y +G G
Sbjct: 70 GIGYGQGAG 78
Score = 48.9 bits (115), Expect = 2e-05
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 398 DKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQL 457
+ E C C K+VY E ++ + +HK+CFRC C L N G++YCK + +
Sbjct: 116 ESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKN 175
Query: 458 FKSKGNYDEGFG 469
F G GFG
Sbjct: 176 FGPTG---IGFG 184
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 51.6 bits (122), Expect = 3e-06
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 335 NQASQFHQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEM---TTPAKQI 391
+ A F +Q T+ + E K L+ + E + D E TP Q
Sbjct: 629 SSAVLFLSKLQRTLQRSRAKENAEDAGGKKLRLEMEAETPSTEVPPDPEPGVPLTPPSQH 688
Query: 392 KKLLLQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASL--HGQIY 449
++ D +C LC + +Y +E L + FH+SCFRCH C + L G Y G Y
Sbjct: 689 QEAGAGD--LCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFY 746
Query: 450 CKPHFKQLFKSKGNYDEG 467
C H Q D G
Sbjct: 747 CLQHLPQTDHKAEGSDRG 764
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 51.6 bits (122), Expect = 3e-06
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 335 NQASQFHQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEM---TTPAKQI 391
+ A F +Q T+ + E K L+ + E + D E TP Q
Sbjct: 543 SSAVLFLSKLQRTLQRSRAKENAEDAGGKKLRLEMEAETPSTEVPPDPEPGVPLTPPSQH 602
Query: 392 KKLLLQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASL--HGQIY 449
++ D +C LC + +Y +E L + FH+SCFRCH C + L G Y G Y
Sbjct: 603 QEAGAGD--LCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFY 660
Query: 450 CKPHFKQLFKSKGNYDEG 467
C H Q D G
Sbjct: 661 CLQHLPQTDHKAEGSDRG 678
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 51.6 bits (122), Expect = 3e-06
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 400 EICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFK 459
E C C +VY E ++ + +HK+CFRC C L G+IYCK + + F
Sbjct: 117 EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFG 176
Query: 460 SKG-NYDEGFGHKQH 473
KG Y +G G H
Sbjct: 177 PKGFGYGQGAGALVH 191
Score = 46.2 bits (108), Expect = 1e-04
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
C C +TVY E + D ++FH+ CF C C L A +IYCK + + + K
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPK 69
Query: 462 G-NYDEGFG 469
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 51.2 bits (121), Expect = 4e-06
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHF-KQLFKS 460
C C K VYP E + + +HK CF C C L++ NY + YC H+ KQ F +
Sbjct: 5 CARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCNAHYPKQSFTT 64
Query: 461 KGNYDEGFGHKQHKD 475
+ E KQ +
Sbjct: 65 VADTPENLRLKQQSE 79
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 50.8 bits (120), Expect = 6e-06
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKSK 461
C +CQKTVY E + + +FHKSCF C C L A +IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 462 G-NYDEGFG 469
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 49.7 bits (117), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHF-KQLFKS 460
C C K VYP E + + +HK+CF C C L++ NY + YC H+ KQ F
Sbjct: 5 CARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCNAHYPKQSFTM 64
Query: 461 KGNYDEGFGHKQHKD 475
+ E KQ +
Sbjct: 65 VADTPENLRLKQQSE 79
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 47.4 bits (111), Expect = 6e-05
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYC-KPHFKQLFKS 460
C CQ+ V+ E + + +N+H+ C +C C+S LS G +A +G+ YC KP + LF
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFGP 64
Query: 461 KGNYDEGFG 469
+G G G
Sbjct: 65 RGVNIGGVG 73
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 393 KLLLQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCK- 451
K + +C C + VY E +++ +N+H+ C RC C+ L+ G++A G YC
Sbjct: 115 KTFTGETSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHV 174
Query: 452 PHFKQLFKSKG 462
P + LF KG
Sbjct: 175 PCYGYLFGPKG 185
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 47.4 bits (111), Expect = 6e-05
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYC-KPHFKQLFKS 460
C C K VY E + + +++H+ C RC C L+ G +A GQ YC KP + LF
Sbjct: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGP 185
Query: 461 KG 462
KG
Sbjct: 186 KG 187
Score = 47.0 bits (110), Expect = 8e-05
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYC-KPHFKQLFKS 460
C C KTVY E + + +++HK C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
Query: 461 KG 462
KG
Sbjct: 65 KG 66
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 47.0 bits (110), Expect = 8e-05
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 387 PAKQIKKLLLQDKEICILCQKTVYPMECLV-ADKQNFHKSCFRCHHCNSKLSLGNYASLH 445
PA+ ++K D IC C KTV P E V A K+ +H CF C C +L+ ++
Sbjct: 170 PAEPVEKGASTD--ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKD 227
Query: 446 GQIYCKPHFKQLFKSKGNYDE--------GFGHKQHKDRWNCKNQSRSV----------- 486
G+ C+P ++ + G E G H + C +R +
Sbjct: 228 GRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQN 287
Query: 487 ------DFIPNEEPNMCKNIAENTLVPGD 509
DF P +C +I EN ++P D
Sbjct: 288 EVYCLDDFYRKFAP-VC-SICENPIIPRD 314
Score = 38.9 bits (89), Expect = 0.023
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 401 ICILCQKTVYPMECLVADK-----QNFHKSCFRCHHCNSKLSL-----GNYASLHGQIYC 450
+C +C+ + P + A K +NFH++C+RC C LS+ G Y L+ ++C
Sbjct: 302 VCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCY-PLNNHLFC 360
Query: 451 KP-HFKQ 456
KP H K+
Sbjct: 361 KPCHVKR 367
>gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens]
Length = 276
Score = 46.6 bits (109), Expect = 1e-04
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 31/151 (20%)
Query: 385 TTPAKQIKKLLLQDKEICILCQKTVYPMECLV-ADKQNFHKSCFRCHHCNSKLSLGNYAS 443
T PA ++ L + +IC C KTV P E V A K+ +H CF C C +L+ ++
Sbjct: 72 TVPAAPMQ---LFNGDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQ 128
Query: 444 LHGQIYCKPHFKQLFKSKGNYDE--------GFGHKQHKDRWNCKNQSRSV--------- 486
G+ C+P ++ + G E G H + C +R +
Sbjct: 129 KDGRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGS 188
Query: 487 --------DFIPNEEPNMCKNIAENTLVPGD 509
DF P +C +I EN ++P D
Sbjct: 189 QNEVYCLDDFYRKFAP-VC-SICENPIIPRD 217
Score = 38.9 bits (89), Expect = 0.023
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 401 ICILCQKTVYPMECLVADK-----QNFHKSCFRCHHCNSKLSL-----GNYASLHGQIYC 450
+C +C+ + P + A K +NFH++C+RC C LS+ G Y L+ ++C
Sbjct: 205 VCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCY-PLNNHLFC 263
Query: 451 KP-HFKQ 456
KP H K+
Sbjct: 264 KPCHVKR 270
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 46.6 bits (109), Expect = 1e-04
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 387 PAKQIKKLLLQDKEICILCQKTVYPMECLV-ADKQNFHKSCFRCHHCNSKLSLGNYASLH 445
PA+ ++K D IC C KTV P E V A K+ +H CF C C +L+ ++
Sbjct: 170 PAEPVEKGASTD--ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKD 227
Query: 446 GQIYCKPHFKQLFKSKGNYDE 466
G+ C+P ++ + G E
Sbjct: 228 GRPLCEPCYQDTLERCGKCGE 248
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPH 453
C C VYP E + Q +HK+CF C C LS+ N+ S + YC H
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAH 57
>gi|46049105 nebulin-related anchoring protein isoform S [Homo
sapiens]
Length = 1730
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPH 453
C C VYP E + Q +HK+CF C C LS+ N+ S + YC H
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAH 57
>gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens]
Length = 77
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCK-PHFKQLFKS 460
C C K VY E + + +++H+ C +C C L+ G +A G+ YC P + +F
Sbjct: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
Query: 461 KG 462
KG
Sbjct: 64 KG 65
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 42.4 bits (98), Expect = 0.002
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 402 CILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYAS--LHGQIYCKPHFKQL 457
C CQ+ V+ ++ +AD + +H+ CFRC C+S L G Y + G C H +L
Sbjct: 164 CAACQQHVHLVQRYLADGRLYHRHCFRCRRCSSTLLPGAYENGPEEGTFVCAEHCARL 221
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 42.0 bits (97), Expect = 0.003
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 38/181 (20%)
Query: 543 KEIPKKTLPFEEELKMSKPKWPPEMTTLLSPEFKSESLLEDVRTPENKGQR---QDHFPF 599
K PK+ P E+K+ KP+ P+M P SES D+ T E+K ++ ++ P
Sbjct: 175 KVSPKRGRPAATEVKIPKPRGRPKMVKQPCP---SES---DIITEEDKSKKKGQEEKQPK 228
Query: 600 LQPYLQSTHVCQKEDVIGIKEMKMPEGRKDEKKEGRKNVQ---------------DRPSE 644
QP K+D G KE P ++ +KKEG+K V+ D E
Sbjct: 229 KQP---------KKDEEGQKEEDKPR-KEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEE 278
Query: 645 AEDTKSNRKSAMDLN----DNNNVIVQSAEKEKNEKTNQTNGAEVLQVTNTDDEMMPENH 700
+D + +K N N++ EKE ++ + + N D+ PE
Sbjct: 279 GDDQEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVK 338
Query: 701 K 701
K
Sbjct: 339 K 339
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 42.0 bits (97), Expect = 0.003
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 38/181 (20%)
Query: 543 KEIPKKTLPFEEELKMSKPKWPPEMTTLLSPEFKSESLLEDVRTPENKGQR---QDHFPF 599
K PK+ P E+K+ KP+ P+M P SES D+ T E+K ++ ++ P
Sbjct: 175 KVSPKRGRPAATEVKIPKPRGRPKMVKQPCP---SES---DIITEEDKSKKKGQEEKQPK 228
Query: 600 LQPYLQSTHVCQKEDVIGIKEMKMPEGRKDEKKEGRKNVQ---------------DRPSE 644
QP K+D G KE P ++ +KKEG+K V+ D E
Sbjct: 229 KQP---------KKDEEGQKEEDKPR-KEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEE 278
Query: 645 AEDTKSNRKSAMDLN----DNNNVIVQSAEKEKNEKTNQTNGAEVLQVTNTDDEMMPENH 700
+D + +K N N++ EKE ++ + + N D+ PE
Sbjct: 279 GDDQEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKKPEVK 338
Query: 701 K 701
K
Sbjct: 339 K 339
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,547,244
Number of Sequences: 37866
Number of extensions: 1830659
Number of successful extensions: 6562
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 5939
Number of HSP's gapped (non-prelim): 861
length of query: 938
length of database: 18,247,518
effective HSP length: 112
effective length of query: 826
effective length of database: 14,006,526
effective search space: 11569390476
effective search space used: 11569390476
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.