C9orf117 2241

Name: C9orf117	Sequence: fasta or formatted (520aa)		NCBI GI: 118918423
Description: hypothetical protein LOC286207		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 31 2 C cysteine 0.6 3 1 D aspartate 4.2 22 1 E glutamate 10.4 54 2 F phenylalanine 2.7 14 1 G glycine 2.9 15 2 H histidine 2.1 11 1 I isoleucine 3.3 17 2 K lysine 9.0 47 3 L leucine 13.3 69 3 M methionine 2.5 13 1 N asparagine 4.0 21 2 P proline 4.4 23 2 Q glutamine 11.5 60 3 R arginine 6.7 35 1 S serine 4.6 24 2 T threonine 4.4 23 2 V valine 5.6 29 2 W tryptophan 0.6 3 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC286207 WDR87 0.053 NYD-SP11 protein PPL 0.047 periplakin CEP250 0.047 centrosomal protein 2 CGNL1 0.046 cingulin-like 1 C14orf45 0.044 hypothetical protein LOC80127 GOLGA4 0.044 golgi autoantigen, golgin subfamily a, 4 MYH9 0.042 myosin, heavy polypeptide 9, non-muscle LOC440243 0.042 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283767 0.042 golgi autoantigen, golgin subfamily a-like LOC283685 0.042 PREDICTED: golgi autoantigen, golgin subfamily a-li... ZNF853 0.040 zinc finger protein 853 ROCK2 0.040 Rho-associated, coiled-coil containing protein kinas... TCHH 0.040 trichohyalin EEA1 0.040 early endosome antigen 1, 162kD MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH1 0.039 myosin, heavy chain 1, skeletal muscle, adult [Homo... SCLT1 0.039 sodium channel associated protein 1 MYH4 0.038 myosin, heavy polypeptide 4, skeletal muscle GCC2 0.037 GRIP and coiled-coil domain-containing 2 MYH7 0.037 myosin, heavy chain 7, cardiac muscle, beta MYH10 0.037 myosin, heavy polypeptide 10, non-muscle CCDC41 0.037 NY-REN-58 antigen CCDC41 0.037 NY-REN-58 antigen KIF5C 0.037 kinesin family member 5C CCDC88A 0.037 coiled-coil domain containing 88A isoform 1 NIN 0.037 ninein isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.