SHARPIN 2238

Name: SHARPIN	Sequence: fasta or formatted (387aa)		NCBI GI: 118918415
Description: shank-interacting protein-like 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.0 58 5 C cysteine 2.6 10 1 D aspartate 2.8 11 1 E glutamate 5.9 23 2 F phenylalanine 2.1 8 1 G glycine 8.8 34 2 H histidine 2.1 8 1 I isoleucine 1.3 5 1 K lysine 1.0 4 1 L leucine 11.4 44 2 M methionine 0.8 3 1 N asparagine 1.6 6 1 P proline 13.7 53 3 Q glutamine 5.7 22 1 R arginine 5.7 22 2 S serine 8.5 33 2 T threonine 3.4 13 1 V valine 5.7 22 1 W tryptophan 1.3 5 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 shank-interacting protein-like 1 RBCK1 0.171 RanBP-type and C3HC4-type zinc finger containing 1 ... RBCK1 0.120 RanBP-type and C3HC4-type zinc finger containing 1 is... MBD6 0.024 methyl-CpG binding domain protein 6 KRTAP4-6 0.022 PREDICTED: keratin associated protein 4.6 KIAA0754 0.021 hypothetical protein LOC643314 ATN1 0.020 atrophin-1 ATN1 0.020 atrophin-1 MLL2 0.018 myeloid/lymphoid or mixed-lineage leukemia 2 BIN1 0.018 bridging integrator 1 isoform 9 BIN1 0.018 bridging integrator 1 isoform 8 ATF5 0.018 activating transcription factor 5 RAD23A 0.018 UV excision repair protein RAD23 homolog A SALL3 0.017 sal-like 3 RAPH1 0.017 Ras association and pleckstrin homology domains 1 is... ZRANB3 0.017 zinc finger, RAN-binding domain containing 3 MAST1 0.017 microtubule associated serine/threonine kinase 1 [Ho... WNK2 0.017 WNK lysine deficient protein kinase 2 LOC285556 0.016 PREDICTED: hypothetical protein LOC285556 LOC285556 0.016 PREDICTED: hypothetical protein LOC285556 LOC285556 0.016 PREDICTED: hypothetical protein LOC285556 PRDM6 0.016 PR domain containing 6 SOLH 0.016 small optic lobes PRR12 0.016 proline rich 12 SPEG 0.016 SPEG complex locus LOC100291627 0.014 PREDICTED: hypothetical protein XP_002345251 LOC100289867 0.014 PREDICTED: hypothetical protein XP_002348034 KRTAP4-9 0.014 PREDICTED: keratin associated protein 4-9 SYN2 0.014 synapsin II isoform IIa GDF5 0.014 growth differentiation factor 5 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.