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Search of human proteins with 239750972
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo
sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo ... 538 e-153
gi|239745378 PREDICTED: hypothetical protein XP_002343450 [Homo ... 538 e-153
gi|19111150 angiomotin isoform 2 [Homo sapiens] 42 4e-04
gi|166064029 angiomotin isoform 1 [Homo sapiens] 42 4e-04
gi|83367077 mucin 16 [Homo sapiens] 37 0.022
gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens] 33 0.19
gi|161019170 mucin 5AC [Homo sapiens] 33 0.25
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 33 0.25
gi|239757240 PREDICTED: hypothetical protein [Homo sapiens] 33 0.32
gi|239751748 PREDICTED: hypothetical protein [Homo sapiens] 33 0.32
gi|239746248 PREDICTED: hypothetical protein XP_002343714 [Homo ... 33 0.32
gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchan... 32 0.42
gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Hom... 32 0.72
gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Hom... 32 0.72
gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo sap... 32 0.72
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 0.94
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 0.94
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 31 0.94
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 31 0.94
gi|134031945 SCO-spondin [Homo sapiens] 31 0.94
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 31 0.94
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 31 1.2
gi|154759249 keratin associated protein 10-11 [Homo sapiens] 31 1.2
gi|193804923 hypothetical protein LOC55086 [Homo sapiens] 30 2.1
gi|153792575 hypothetical protein LOC90120 [Homo sapiens] 30 2.1
gi|226437579 NAC alpha domain containing [Homo sapiens] 30 2.7
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 2.7
gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo ... 30 2.7
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 2.7
>gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo
sapiens]
Length = 259
Score = 538 bits (1386), Expect = e-153
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA
Sbjct: 1 MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
Query: 61 TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA
Sbjct: 61 TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
Query: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS
Sbjct: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
Query: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC
Sbjct: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
Query: 241 AGAGSACRARRSHGRTCST 259
AGAGSACRARRSHGRTCST
Sbjct: 241 AGAGSACRARRSHGRTCST 259
>gi|239745378 PREDICTED: hypothetical protein XP_002343450 [Homo
sapiens]
Length = 259
Score = 538 bits (1386), Expect = e-153
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA
Sbjct: 1 MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
Query: 61 TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA
Sbjct: 61 TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
Query: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS
Sbjct: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
Query: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC
Sbjct: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
Query: 241 AGAGSACRARRSHGRTCST 259
AGAGSACRARRSHGRTCST
Sbjct: 241 AGAGSACRARRSHGRTCST 259
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 42.4 bits (98), Expect = 4e-04
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 10 SGEAMTSSPACS---RISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRL 66
S + T S CS S+ T SVP P AA+T ++ A A+ + T V
Sbjct: 443 SAHSKTGSRDCSTQTERGTESNKTAAVAPISVP-APVAAAATAAAITATAATITTTMVAA 501
Query: 67 SGVAMVMVSA-AAASGPS----AVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRAT 121
+ VA+ +A AAA+ PS A +++ V+ PA A ++ + + A
Sbjct: 502 APVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA--SVASAAAVAPSAAAAAA 559
Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDR-----GQPWLP 176
Q P P +P+ + + A + +SA A A Q +P
Sbjct: 560 VQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 619
Query: 177 LGPSTAPGPH 186
P+T PGPH
Sbjct: 620 ASPATGPGPH 629
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 42.4 bits (98), Expect = 4e-04
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 10 SGEAMTSSPACS---RISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRL 66
S + T S CS S+ T SVP P AA+T ++ A A+ + T V
Sbjct: 852 SAHSKTGSRDCSTQTERGTESNKTAAVAPISVP-APVAAAATAAAITATAATITTTMVAA 910
Query: 67 SGVAMVMVSA-AAASGPS----AVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRAT 121
+ VA+ +A AAA+ PS A +++ V+ PA A ++ + + A
Sbjct: 911 APVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA--SVASAAAVAPSAAAAAA 968
Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDR-----GQPWLP 176
Q P P +P+ + + A + +SA A A Q +P
Sbjct: 969 VQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 1028
Query: 177 LGPSTAPGPH 186
P+T PGPH
Sbjct: 1029 ASPATGPGPH 1038
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 36.6 bits (83), Expect = 0.022
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Query: 5 TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
T PS PA S +S+ D +VT + P++ A T+ + + +AT V
Sbjct: 9618 TEVMPSSRTSIPGPAQSTMSLDISDEVVTRLSTSPIMTESAEITITTQTGYS--LATSQV 9675
Query: 65 RLS-GVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWC------TICCTTFMMWLST 117
L G +M +S ++ +S S +T +L+W T ++ + L
Sbjct: 9676 TLPLGTSMTFLSGTHSTMSQGLSHSEMTNLMSRGPESLSWTSPRFVETTRSSSSLTSLPL 9735
Query: 118 CRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASS 159
+ + +SP P LP+TS+ +P ++ ++ SS
Sbjct: 9736 TTSLSPVSSTLLDSSPSSP-LPVTSLILPGLVKTTEVLDTSS 9776
>gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens]
Length = 329
Score = 33.5 bits (75), Expect = 0.19
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 108 CTTFMMWLSTCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQ 167
C +++L+ C A R G SPPPPA + ++ +++ A + +V +
Sbjct: 22 CGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRSTWL 81
Query: 168 KDRGQP---WLPLGPSTA 182
RG P W TA
Sbjct: 82 ARRGAPGDVWARFAVGTA 99
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 33.1 bits (74), Expect = 0.25
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 37/163 (22%)
Query: 2 TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMAT 61
T+ T P+G T+S S + + +VT ++P ASTVPS +
Sbjct: 5175 TIATVMVPTGSTATAS---STLGTAHTPKVVTTMATMPTA---TASTVPS---------S 5219
Query: 62 CSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTIC-CTTFMMWLS---- 116
+V + V+ S+ S VSSS++T +P+ + T C C F + S
Sbjct: 5220 STVGTTRTPAVLPSSLPTFSVSTVSSSVLTTLRPTGFPSSHFSTPCFCRAFGQFFSPGEV 5279
Query: 117 ----TCRATAQQERLC---------QGASP--PPP--ALPLTS 142
T RA +C QGA P PPP + PL+S
Sbjct: 5280 IYNKTDRAGCHFYAVCNQHCDIDRFQGACPTSPPPVSSAPLSS 5322
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 33.1 bits (74), Expect = 0.25
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 37/163 (22%)
Query: 2 TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMAT 61
T+ T P+G T+S S + + +VT ++P ASTVPS +
Sbjct: 4856 TIATVMVPTGSTATAS---STLGTAHTPKVVTTMATMPTA---TASTVPS---------S 4900
Query: 62 CSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTIC-CTTFMMWLS---- 116
+V + V+ S+ S VSSS++T +P+ + T C C F + S
Sbjct: 4901 STVGTTRTPAVLPSSLPTFSVSTVSSSVLTTLRPTGFPSSHFSTPCFCRAFGQFFSPGEV 4960
Query: 117 ----TCRATAQQERLC---------QGASP--PPP--ALPLTS 142
T RA +C QGA P PPP + PL+S
Sbjct: 4961 IYNKTDRAGCHFYAVCNQHCDIDRFQGACPTSPPPVSSAPLSS 5003
>gi|239757240 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 5 TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
+S W + S CSR +M M C VP V A VP+ S+ C +
Sbjct: 49 SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99
Query: 65 RLSGVAMVMVSAAAASGP 82
+ G+ V S AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117
>gi|239751748 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 5 TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
+S W + S CSR +M M C VP V A VP+ S+ C +
Sbjct: 49 SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99
Query: 65 RLSGVAMVMVSAAAASGP 82
+ G+ V S AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117
>gi|239746248 PREDICTED: hypothetical protein XP_002343714 [Homo
sapiens]
Length = 217
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 5 TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
+S W + S CSR +M M C VP V A VP+ S+ C +
Sbjct: 49 SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99
Query: 65 RLSGVAMVMVSAAAASGP 82
+ G+ V S AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117
>gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchange
factor 4 [Homo sapiens]
Length = 368
Score = 32.3 bits (72), Expect = 0.42
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 29/145 (20%)
Query: 99 PALAWCTICCTTFMMWLSTCRATAQQERLCQ------GASPPPPALPLTSVWV---PSMI 149
P+ + TI + + + C A + Q+ C A+PPPPA P S+W+ P+ +
Sbjct: 160 PSPSQLTIGSSPLIPPRAACPAWSLQQVRCTPWTHPAAAAPPPPAQPSPSLWLELGPACV 219
Query: 150 SVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHLDDILLGVSYHGRELHQHCVR 209
S SS D L S++ G D GV G
Sbjct: 220 RAQQCPSESSGQTSGD---------LGTSSSSSAGLSPGSDSDSSGVVCGG--------- 261
Query: 210 VFREDGGGCRGAVLRHQQLLHLQQA 234
R GG RGAV R L L+ A
Sbjct: 262 --RGGNGGMRGAVSRSWSLESLRSA 284
>gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 31.6 bits (70), Expect = 0.72
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
QGAS PP V++P S ++SSA A G+ WLP GP P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188
>gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 31.6 bits (70), Expect = 0.72
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
QGAS PP V++P S ++SSA A G+ WLP GP P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188
>gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo
sapiens]
Length = 697
Score = 31.6 bits (70), Expect = 0.72
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
QGAS PP V++P S ++SSA A G+ WLP GP P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 0.94
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
PPPP LP + S ++V +L S L PSTAPGPH L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 0.94
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
PPPP LP + S ++V +L S L PSTAPGPH L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 0.94
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
PPPP LP + S ++V +L S L PSTAPGPH L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 0.94
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
PPPP LP + S ++V +L S L PSTAPGPH L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 31.2 bits (69), Expect = 0.94
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Query: 116 STCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQ-KDRGQPW 174
S+C A QE C PP P+ S+W S+ A DG + RG+
Sbjct: 2810 SSCPGDATQEEPCS-----PPVCPVPSIW-------GLWAPWSTCSAPCDGGIQTRGRSC 2857
Query: 175 LPLGP--STAPGPHTHLDD 191
L P +T PGPH+ D
Sbjct: 2858 SSLAPGDTTCPGPHSQTRD 2876
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 31.2 bits (69), Expect = 0.94
Identities = 37/157 (23%), Positives = 54/157 (34%), Gaps = 27/157 (17%)
Query: 18 PACSRISMSSDDTMVTVACS-VPLVPA---------RAASTVPSLMAEASVMATCSV--R 65
P C S S V V C V VP + +S P+ + C V R
Sbjct: 129 PTCCASSSSQQSCCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTSSPCQQACCVPVR 188
Query: 66 LSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRATAQQE 125
V + ++ S + C PA CCTT S CR ++
Sbjct: 189 CKPVCCKPICCVPVCSGASTSCCQQSSCQ----PA------CCTT-----SCCRPSSSVS 233
Query: 126 RLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVA 162
LC+ P +P++S P+ AS +S V+
Sbjct: 234 LLCRPVCRPACCMPVSSCCAPASSCQASCCRPASCVS 270
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 30.8 bits (68), Expect = 1.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 134 PPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGP 179
PPP ++ +P M + A+ +A+ DGQ DR +PW P P
Sbjct: 714 PPPCHKSPALKLPGMTTGATTQTATLP----DGQTDRARPWSPPAP 755
>gi|154759249 keratin associated protein 10-11 [Homo sapiens]
Length = 298
Score = 30.8 bits (68), Expect = 1.2
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 4 CTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCS 63
CTSS P +A P C + V V C R +S P+ A +S C
Sbjct: 90 CTSS-PCQQACCV-PVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCASSSCQPACC 147
Query: 64 VRLSGVAMVMVSAAAASGPSAV--SSSMVTFCTMIWWPALAWCTICCTT 110
V + + VS + S SS CT + +CC T
Sbjct: 148 VPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCTSSSYQQACCVPVCCKT 196
>gi|193804923 hypothetical protein LOC55086 [Homo sapiens]
Length = 855
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 111 FMMWLSTCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAV 161
F+ W+ T + +Q+ + G P P +P T S I V SL++A S V
Sbjct: 485 FIQWIRTKSDSGEQKNMVIGGYYPYPPVPETFSKYSSSIKVESLLTAISEV 535
>gi|153792575 hypothetical protein LOC90120 [Homo sapiens]
Length = 135
Score = 30.0 bits (66), Expect = 2.1
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 18 PACSR-ISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRLSGVAMVMVSA 76
PAC R + T + + +R A S + +++ A CS+R SGV SA
Sbjct: 44 PACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSA 103
Query: 77 AAA-SGPSAVSSSMVTFCTMIWWPALAW 103
+ + S +SS C W A AW
Sbjct: 104 YSTWAFASCCASSASCRCCCCCWAAGAW 131
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 29.6 bits (65), Expect = 2.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
A++ER G S P P LP ++ + ASL S + A DRG P P P++
Sbjct: 1123 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1175
Query: 182 AP 183
AP
Sbjct: 1176 AP 1177
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 29.6 bits (65), Expect = 2.7
Identities = 47/200 (23%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 2 TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACS-VPLVPARAASTVPSLMAEASV-- 58
T S W S A SP+ S S SSD + + S V +RA+++ S A +S
Sbjct: 219 TPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSASW 278
Query: 59 --------MATCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTT 110
S + + SA + SG S+ S S + ++ W + + +
Sbjct: 279 DSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPS 338
Query: 111 FMMWLSTCRATAQQERLCQGASPPPPALPLT--SVWVPSMIS----VASLVSASSAVAWA 164
W S + ASP + S W S AS S S WA
Sbjct: 339 DSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASPSASWASPSASGASTPSDSGWA 398
Query: 165 DGQKDRGQPWLPLGPSTAPG 184
+P PS PG
Sbjct: 399 SPSASGAS--MPSAPSLCPG 416
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 29.6 bits (65), Expect = 2.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
A++ER G S P P LP ++ + ASL S + A DRG P P P++
Sbjct: 1083 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1135
Query: 182 AP 183
AP
Sbjct: 1136 AP 1137
>gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo
sapiens]
Length = 284
Score = 29.6 bits (65), Expect = 2.7
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 16 SSPACSRISMS-------SDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRLSG 68
S PACS + + S + + C P P R S+ P + +S S+ L+
Sbjct: 15 SPPACSLPTAAPAPPLRPSPSSKTVLGCQAP--PRRPPSSTPCPLLTSSPSPLPSLLLTA 72
Query: 69 VAMVMVSAAAASGPSAVSSSMVTFCTMIWW---PALAWCTI-CCTTFMMWLSTCRATAQQ 124
A + S FC ++ P C++ C TF S+ A
Sbjct: 73 AAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPG 132
Query: 125 E----RLCQGASPPPP 136
+ L GA+PPPP
Sbjct: 133 KIGGVSLAVGAAPPPP 148
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 29.6 bits (65), Expect = 2.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
A++ER G S P P LP ++ + ASL S + A DRG P P P++
Sbjct: 1083 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1135
Query: 182 AP 183
AP
Sbjct: 1136 AP 1137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.127 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,568,657
Number of Sequences: 37866
Number of extensions: 553957
Number of successful extensions: 2346
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2289
Number of HSP's gapped (non-prelim): 89
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.