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Search of human proteins with 239749338
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo
sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo ... 502 e-142
gi|239747664 PREDICTED: similar to hCG2042412 [Homo sapiens] 42 6e-04
gi|44890059 involucrin [Homo sapiens] 42 6e-04
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|5032033 RNA binding motif protein 6 [Homo sapiens] 39 0.004
gi|238908501 sciellin isoform 3 [Homo sapiens] 37 0.014
gi|238908499 sciellin isoform 1 [Homo sapiens] 37 0.018
gi|238908497 sciellin isoform 2 [Homo sapiens] 37 0.018
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.041
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 35 0.070
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ... 32 0.59
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 31 0.78
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ... 30 1.3
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ... 30 1.3
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ... 30 1.3
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ... 30 1.3
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ... 30 1.3
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ... 30 1.3
gi|4826659 F-actin capping protein beta subunit [Homo sapiens] 29 3.9
gi|239755924 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|169174331 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo ... 28 5.0
gi|169172659 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo ... 28 5.0
gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo ... 28 5.0
gi|169172837 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|171460956 ubiquitin specific peptidase like 1 [Homo sapiens] 28 6.6
gi|117306178 hypothetical protein LOC55731 [Homo sapiens] 28 6.6
gi|117306174 hypothetical protein LOC55731 [Homo sapiens] 28 6.6
gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [... 28 8.6
>gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo
sapiens]
Length = 230
Score = 502 bits (1292), Expect = e-142
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MALQPREHPTASEEHLCLIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAP 60
MALQPREHPTASEEHLCLIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAP
Sbjct: 1 MALQPREHPTASEEHLCLIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAP 60
Query: 61 HLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTP 120
HLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTP
Sbjct: 61 HLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTP 120
Query: 121 DLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTP 180
DLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTP
Sbjct: 121 DLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTP 180
Query: 181 HLENNGPLAPHLENNGRLAPQLENNGIMGTEHPTWGVTGTWHQTWRIMGA 230
HLENNGPLAPHLENNGRLAPQLENNGIMGTEHPTWGVTGTWHQTWRIMGA
Sbjct: 181 HLENNGPLAPHLENNGRLAPQLENNGIMGTEHPTWGVTGTWHQTWRIMGA 230
>gi|239747664 PREDICTED: similar to hCG2042412 [Homo sapiens]
Length = 336
Score = 41.6 bits (96), Expect = 6e-04
Identities = 36/164 (21%), Positives = 68/164 (41%)
Query: 45 NGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLEN 104
+G + P +G + P G + P +G + P G + P +G + P
Sbjct: 77 DGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAW 136
Query: 105 NGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLEN 164
+G + P +G + P +G + P +G + P +G + P +G + P
Sbjct: 137 DGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAWDGAIVPVSAW 196
Query: 165 NGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGIM 208
+G +VP +G + P +G + P +GR+ P +GI+
Sbjct: 197 DGGIVPVSAWDGGIVPVSVWDGVIVPVSVWDGRIVPVSVWDGII 240
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 41.6 bits (96), Expect = 6e-04
Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 17/190 (8%)
Query: 7 EHPTASEEHLCLIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKG 66
+HP E L L P GQ L + G L L + G L + G+L + +G
Sbjct: 174 KHPEQQEGQLEL-PEQQEGQLELPE-QQEGQLELPEQQEGQLELPEQQEGQLELPEQQEG 231
Query: 67 RLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENN-GRLTPDLENNGRLTPDLENN 125
+L + G+L + +G+L + G L HLE+ G+L E G+L +
Sbjct: 232 QLELPQQQEGQLELSEQQEGQLELSEQQEGQLK-HLEHQEGQLEVPEEQMGQLKYLEQQE 290
Query: 126 GRLTPHLENN-----------GRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLEN 174
G+L HL+ G+L HLE HLE QLE + HLE
Sbjct: 291 GQLK-HLDQQEKQPELPEQQMGQLK-HLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQ 348
Query: 175 NGRLTPHLEN 184
HLE+
Sbjct: 349 QEGQLEHLEH 358
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/189 (29%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 28 RLAHLEHH-GHLALHLENNGCLAPHVENNGRLAPHLENK-----------GRLTPHLENN 75
+L HLEH G L + E G L + G+L HL+ + G+L HLE
Sbjct: 262 QLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLK-HLDQQEKQPELPEQQMGQLK-HLEQQ 319
Query: 76 GRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENN-GRL---------TPDLENN 125
HLE + LE HLE LE+ G+L LE
Sbjct: 320 EGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQ 379
Query: 126 GRLTPHLENN-GRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLEN 184
HLE G+L ++ G+L ++ G QLE R V HLE HLE
Sbjct: 380 QGQPKHLEEEEGQLKHLVQQEGQLKHLVQQEG----QLEQQERQVEHLEQQVGQLKHLEE 435
Query: 185 NGPLAPHLE 193
HLE
Sbjct: 436 QEGQLKHLE 444
Score = 37.0 bits (84), Expect = 0.014
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Query: 33 EHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDL 92
+ GHL + G L + G+L + +G+L + G+L + +G+L
Sbjct: 158 QQEGHLKHLEQQEGQLKHPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPE 217
Query: 93 ENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLEN-NGRLTPH 151
+ G L + G+L + G+L + G+L + G+L HLE+ G+L
Sbjct: 218 QQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQEGQL-KHLEHQEGQLEVP 276
Query: 152 LENNGRLAPQLENNGRLVPHLENN-----------GRLTPHLENNGPLAPHLENNGRLAP 200
E G+L + G+L HL+ G+L HLE HLE
Sbjct: 277 EEQMGQLKYLEQQEGQL-KHLDQQEKQPELPEQQMGQL-KHLEQQEGQPKHLEQQEGQLE 334
Query: 201 QLE 203
QLE
Sbjct: 335 QLE 337
Score = 33.5 bits (75), Expect = 0.16
Identities = 47/168 (27%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 4 QPREHPTASEEHLCLIPHPLPGQPRLAHLEHHGHLALHLE-NNGCLAPHVENNGRLAPHL 62
Q + P E+ + GQ L HLE HLE G L E G+L HL
Sbjct: 298 QQEKQPELPEQQM--------GQ--LKHLEQQEGQPKHLEQQEGQLEQLEEQEGQL-KHL 346
Query: 63 ENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHL-ENNGRLTPDLENNGRLTPD 121
E + HLE+ E + LE HL E G+L ++ G+L
Sbjct: 347 EQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQLKHLVQQEGQLKHL 406
Query: 122 LENNGRLTPHLENNGRLTPHLENNGRLTPHL-ENNGRLAPQLENNGRL 168
++ G+ LE R HLE HL E G+L + G+L
Sbjct: 407 VQQEGQ----LEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQGQL 450
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 40.0 bits (92), Expect = 0.002
Identities = 47/230 (20%), Positives = 83/230 (36%), Gaps = 27/230 (11%)
Query: 18 LIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGR-------LTP 70
++P P P + L G + L L +G + P+ + G + P G L P
Sbjct: 3586 VVPDSAPDCPVVPVLPTDGFVVLDLLVDGVVVPNPADVGPVVPDPTTDGPDSIKDFPLVP 3645
Query: 71 HLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLT----------PDLENNGRLTP 120
+ + P G + D +G + P + + PDL +G + P
Sbjct: 3646 DPWPDCPVVPVTRTDGPVVLDSSADGVVVPVTPGDDSVALVTPTDNLVVPDLTTDGPVVP 3705
Query: 121 DLENNGR----------LTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVP 170
D +G L P+ + P+ + + + L P+ NG +V
Sbjct: 3706 DPSADGPVVLVSLADDLLVPNPPVKDTVVPNSVADNPVALDPVTDCPLVPEPSANGLVVT 3765
Query: 171 HLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGIMGTEHPTWGVTGT 220
+ G + P + P+ + E NG + P + NG + + PT G T
Sbjct: 3766 DSLDEGPVVPDPSADDPVVLNPETNGLVVPDISANGPVVPDTPTDGSDAT 3815
Score = 35.0 bits (79), Expect = 0.054
Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 20/196 (10%)
Query: 18 LIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGR 77
L+P P P P + G + L +G + P +TP ++
Sbjct: 3643 LVPDPWPDCPVVPVTRTDGPVVLDSSADGVVVP-----------------VTPGDDSVAL 3685
Query: 78 LTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGR 137
+TP + PDL +G + P +G + + L P+ + P+ +
Sbjct: 3686 VTP---TDNLVVPDLTTDGPVVPDPSADGPVVLVSLADDLLVPNPPVKDTVVPNSVADNP 3742
Query: 138 LTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGR 197
+ + L P NG + + G +VP + + + E NG + P + NG
Sbjct: 3743 VALDPVTDCPLVPEPSANGLVVTDSLDEGPVVPDPSADDPVVLNPETNGLVVPDISANGP 3802
Query: 198 LAPQLENNGIMGTEHP 213
+ P +G T P
Sbjct: 3803 VVPDTPTDGSDATVTP 3818
Score = 32.7 bits (73), Expect = 0.27
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Query: 75 NGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLEN 134
+GR+ P + P + +P +G + P + P +G + P
Sbjct: 694 DGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPDGPVVPVTSA 753
Query: 135 NGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVP--HLENNGRLTPHLENNGPLAPHL 192
+G + P +G + P +G +AP +G +VP + NG P + P P +
Sbjct: 754 DGPVAPVSSADGPVVPVTSADGPVAPVSSADGPVVPVTPADTNGPAVPVTSADSPFVPVI 813
Query: 193 ENNGRLAP 200
+ + P
Sbjct: 814 PADSPVVP 821
Score = 32.3 bits (72), Expect = 0.35
Identities = 24/102 (23%), Positives = 45/102 (44%)
Query: 86 GRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENN 145
G + D +G + P + +G L D + + PD + +TP +G + P +
Sbjct: 3534 GPVASDPSIDGIVVPVVSPSGLLVLDSVADVSILPDTSADVPVTPVTLADGSVVPDSAPD 3593
Query: 146 GRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGP 187
+ P L +G + L +G +VP+ + G + P +GP
Sbjct: 3594 CPVVPVLPTDGFVVLDLLVDGVVVPNPADVGPVVPDPTTDGP 3635
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 2/162 (1%)
Query: 49 APHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRL 108
+P +G + P P +G + P G + P +G + P +G +
Sbjct: 718 SPVTSADGPVVPVTSADSPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVVPVTSADGPV 777
Query: 109 TPDLENNGRLTP--DLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNG 166
P +G + P + NG P + P + + + P + + P +
Sbjct: 778 APVSSADGPVVPVTPADTNGPAVPVTSADSPFVPVIPADSPVVPVTPADDPIVPVTPADS 837
Query: 167 RLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGIM 208
VP + + P + +GP+ + + P N I+
Sbjct: 838 SFVPVISADSPFVPVIPADGPVVVDSSTDVLVVPVFPVNCIL 879
Score = 31.2 bits (69), Expect = 0.78
Identities = 21/103 (20%), Positives = 41/103 (39%)
Query: 98 LTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGR 157
++P +GR+ P + P + +P +G + P + P +G
Sbjct: 1028 VSPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPDGP 1087
Query: 158 LAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAP 200
+ P +G + P +G + P +GP+AP +G + P
Sbjct: 1088 VVPVTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADGPVVP 1130
Score = 30.8 bits (68), Expect = 1.0
Identities = 24/123 (19%), Positives = 47/123 (38%)
Query: 68 LTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGR 127
++P +GR+ P + P + +P +G + P + P +G
Sbjct: 1028 VSPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPDGP 1087
Query: 128 LTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGP 187
+ P +G + P +G + P +G +AP +G +VP + P + P
Sbjct: 1088 VVPVTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADGPVVPVTPADSPFIPVTTADDP 1147
Query: 188 LAP 190
+ P
Sbjct: 1148 IVP 1150
Score = 30.8 bits (68), Expect = 1.0
Identities = 21/99 (21%), Positives = 40/99 (40%)
Query: 108 LTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGR 167
++P +GR+ P + P + +P +G + P + P +G
Sbjct: 1028 VSPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPDGP 1087
Query: 168 LVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
+VP +G + P +GP+ P +G +AP +G
Sbjct: 1088 VVPVTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADG 1126
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 115 NGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLEN 174
+GR+ P + P + +P +G + P + P +G +VP
Sbjct: 694 DGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPDGPVVPVTSA 753
Query: 175 NGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
+G + P +GP+ P +G +AP +G
Sbjct: 754 DGPVAPVSSADGPVVPVTSADGPVAPVSSADG 785
Score = 30.0 bits (66), Expect = 1.7
Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 3/189 (1%)
Query: 18 LIPHPLPGQPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGR 77
++P P+ ++ G +A +G + P V +G L + P +
Sbjct: 3516 VVPDPITDSLVVSDPMTDGPVASDPSIDGIVVPVVSPSGLLVLDSVADVSILPDTSADVP 3575
Query: 78 LTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGR 137
+TP G + PD + + P L +G + DL +G + P+ + G + P +G
Sbjct: 3576 VTPVTLADGSVVPDSAPDCPVVPVLPTDGFVVLDLLVDGVVVPNPADVGPVVPDPTTDG- 3634
Query: 138 LTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGR 197
P + L P + + P +G +V +G + P + +A +
Sbjct: 3635 --PDSIKDFPLVPDPWPDCPVVPVTRTDGPVVLDSSADGVVVPVTPGDDSVALVTPTDNL 3692
Query: 198 LAPQLENNG 206
+ P L +G
Sbjct: 3693 VVPDLTTDG 3701
Score = 28.9 bits (63), Expect = 3.9
Identities = 21/107 (19%), Positives = 42/107 (39%)
Query: 100 PHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLA 159
P + + + P + ++P +GR+ P + P + +P +G +
Sbjct: 1010 PVTQADSPVVPVTSADRPVSPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVV 1069
Query: 160 PQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
P + VP +G + P +GP+AP +G + P +G
Sbjct: 1070 PVTSADSPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVVPVTSADG 1116
Score = 28.9 bits (63), Expect = 3.9
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 108 LTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGR 167
+ PD ++G + D ++ L P + + P NG + P +G +AP +G
Sbjct: 3215 VVPDPSSDGPVVADSLDDDGLVPVTPADDSVVPDSPANGLVVPDPTTDGPVAPDPSVDGP 3274
Query: 168 LVP 170
+VP
Sbjct: 3275 VVP 3277
Score = 28.1 bits (61), Expect = 6.6
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 108 LTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGR 167
+ P + L P +GR+ P + P + +P +G + P +
Sbjct: 417 VVPVTSADSPLIPVTTADGRVVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADIP 476
Query: 168 LVPHLENNGRLTPHLENNGPLAPHLENNGRLAP 200
LVP +G + P +GP+AP +G + P
Sbjct: 477 LVPVTPPDGPVVPVTSADGPVAPVSSADGPVVP 509
Score = 28.1 bits (61), Expect = 6.6
Identities = 21/107 (19%), Positives = 41/107 (38%)
Query: 100 PHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLA 159
P + + + P + + P +GR+ P + P + +P +G +
Sbjct: 669 PVTQADSPVVPVTSADRPVIPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVV 728
Query: 160 PQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
P + VP +G + P +GP+AP +G + P +G
Sbjct: 729 PVTSADSPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVVPVTSADG 775
>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
Length = 1123
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Query: 32 LEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPD 91
+++ G A H+ A V+ GR AP + +GR T L+ GR H + +GR D
Sbjct: 143 MDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSD 202
Query: 92 LENNGCLTPHLENNGRLTPDLE--NNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLT 149
L+ + R DL+ + D G T L+ R TPH + GR
Sbjct: 203 LDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDFRDRDTPHSDFRGRHR 262
Query: 150 PHLENNGR---LAPQLENNGRLVPHLENN 175
+ + R + +E R +P ++ N
Sbjct: 263 SRTDQDFRGREMGSCMEFKDREMPPVDPN 291
Score = 33.5 bits (75), Expect = 0.16
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Query: 57 RLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNG 116
R P ++ +G ++ GR PH+ + R ++ G P + GR T DL+ G
Sbjct: 128 REGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRG 187
Query: 117 RLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGR--LVPHLEN 174
R + GR L+ R + R L+ + Q++ GR L+
Sbjct: 188 RDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDF 247
Query: 175 NGRLTPHLENNG 186
R TPH + G
Sbjct: 248 RDRDTPHSDFRG 259
Score = 32.7 bits (73), Expect = 0.27
Identities = 29/118 (24%), Positives = 46/118 (38%)
Query: 80 PHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLT 139
PH + +G P + G + R + L+ GR + R P ++ G
Sbjct: 81 PHGDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDG 140
Query: 140 PHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGR 197
++ GR PH+ R A ++ GR P + GR T L+ G H + GR
Sbjct: 141 TSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGR 198
Score = 32.0 bits (71), Expect = 0.46
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
Query: 31 HLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGR--L 88
H+ + A ++ G AP + GR L+ +GR H + GR L+ + R
Sbjct: 152 HMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRAREQS 211
Query: 89 TPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGR 137
D N + D G T DL+ R TPH + GR
Sbjct: 212 RSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDFRDRDTPHSDFRGR 260
Score = 31.6 bits (70), Expect = 0.59
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Query: 50 PHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLT 109
P ++ G ++ +GR PH+ R ++ +GR P + G T L+ GR
Sbjct: 131 PPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDG 190
Query: 110 PDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLA--PQLENNGR 167
+ GR DL+ R + R L+ + ++ GR + L+ R
Sbjct: 191 SHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDFRDR 250
Query: 168 LVPHLENNGR 177
PH + GR
Sbjct: 251 DTPHSDFRGR 260
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/117 (23%), Positives = 47/117 (40%)
Query: 57 RLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNG 116
R + L+ +GR + R P ++ +G ++ G PH+ R ++ G
Sbjct: 108 RDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRG 167
Query: 117 RLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLE 173
R P + GR T L+ GR H + GR L+ R + + R V L+
Sbjct: 168 RDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLD 224
Score = 28.5 bits (62), Expect = 5.0
Identities = 25/103 (24%), Positives = 41/103 (39%)
Query: 65 KGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLEN 124
+ R + L+ GR + + R P ++ G ++ GR P + R ++
Sbjct: 106 QSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDF 165
Query: 125 NGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGR 167
GR P + GR T L+ GR H + GR L+ R
Sbjct: 166 RGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRAR 208
>gi|238908501 sciellin isoform 3 [Homo sapiens]
Length = 646
Score = 37.0 bits (84), Expect = 0.014
Identities = 24/118 (20%), Positives = 54/118 (45%)
Query: 53 ENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDL 112
+ N + +LE+ ++ + R + L+N + P N L+N ++TP++
Sbjct: 299 DKNEKGRQNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEV 358
Query: 113 ENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVP 170
+ + + + DL N ++ P E + L++ ++TP + LEN +++P
Sbjct: 359 KRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLENLIKVIP 416
Score = 35.4 bits (80), Expect = 0.041
Identities = 30/155 (19%), Positives = 64/155 (41%)
Query: 50 PHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLT 109
P VE + A LE+ ++ + +G+ L + ++ + N +LE+ ++
Sbjct: 256 PKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVN 315
Query: 110 PDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLV 169
+ R + DL+N + P N L+N ++TP ++ + + + L N ++
Sbjct: 316 ARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVY 375
Query: 170 PHLENNGRLTPHLENNGPLAPHLENNGRLAPQLEN 204
P E + L++ + P + LEN
Sbjct: 376 PGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLEN 410
Score = 32.0 bits (71), Expect = 0.46
Identities = 24/134 (17%), Positives = 59/134 (44%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
L++ R P +E + + LE+ ++ + +G+ L + ++ + N + +
Sbjct: 248 LDSLFRANPKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQN 307
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
LE+ ++ + R + L+N + P+ N L+N ++TP ++ + +
Sbjct: 308 LESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSKD 367
Query: 192 LENNGRLAPQLENN 205
L N ++ P E +
Sbjct: 368 LNNFIKVYPGTEKS 381
Score = 30.0 bits (66), Expect = 1.7
Identities = 26/153 (16%), Positives = 62/153 (40%)
Query: 32 LEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPD 91
+E A LE+ ++ + +G+ L + ++ + N + +LE+ ++
Sbjct: 258 VEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVNAR 317
Query: 92 LENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPH 151
+ + L+N + P N L+N ++TP ++ + + + L N ++ P
Sbjct: 318 MNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPG 377
Query: 152 LENNGRLAPQLENNGRLVPHLENNGRLTPHLEN 184
E + L++ ++ P + LEN
Sbjct: 378 TEKSTEGGQSLDSLIKVTPERNRTNQGNQDLEN 410
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 8/173 (4%)
Query: 41 HLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTP 100
+LE+ + + R + L+N + P N L+N ++TP+++ + +
Sbjct: 307 NLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSK 366
Query: 101 HLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPH--------L 152
L N ++ P E + L++ ++TP + LEN ++ P L
Sbjct: 367 DLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLENLIKVIPSANKSSEQGL 426
Query: 153 ENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENN 205
+ + ++P+ N L+ ++ P + N L N ++ P + N
Sbjct: 427 DEHINVSPKAVKNTDGKQDLDKLIKVNPEIFTNNQRNQDLANLIKVNPAVIRN 479
Score = 27.7 bits (60), Expect = 8.6
Identities = 23/134 (17%), Positives = 55/134 (41%)
Query: 62 LENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPD 121
L++ R P +E + LE+ ++ + +G L + ++ + N + +
Sbjct: 248 LDSLFRANPKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQN 307
Query: 122 LENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPH 181
LE+ ++ + R + L+N + P N L+N ++ P ++ + + +
Sbjct: 308 LESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSKD 367
Query: 182 LENNGPLAPHLENN 195
L N + P E +
Sbjct: 368 LNNFIKVYPGTEKS 381
Score = 27.7 bits (60), Expect = 8.6
Identities = 24/145 (16%), Positives = 60/145 (41%)
Query: 57 RLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNG 116
R P +E + + LE+ ++ + G+ L + + + N + +LE+
Sbjct: 253 RANPKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVA 312
Query: 117 RLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNG 176
++ + R + L+N + P N L+N ++ P+++ + + L N
Sbjct: 313 KVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNLIKVTPEVKRSNQGSKDLNNFI 372
Query: 177 RLTPHLENNGPLAPHLENNGRLAPQ 201
++ P E + L++ ++ P+
Sbjct: 373 KVYPGTEKSTEGGQSLDSLIKVTPE 397
>gi|238908499 sciellin isoform 1 [Homo sapiens]
Length = 688
Score = 36.6 bits (83), Expect = 0.018
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 65 KGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLEN 124
KGR +LE+ ++ + R + DL+N + P N DL+ ++ P+
Sbjct: 325 KGR--QNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNK 382
Query: 125 NGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLEN 184
N L+N ++TP ++ + + + L N ++ P E + L++ ++TP
Sbjct: 383 NITRGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNR 442
Query: 185 NGPLAPHLENNGRLAPQLENNGIMGTE 211
LEN ++ P + G +
Sbjct: 443 TNQGNQDLENLIKVIPSANKSSEQGLD 469
Score = 35.0 bits (79), Expect = 0.054
Identities = 26/130 (20%), Positives = 57/130 (43%)
Query: 41 HLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTP 100
+LE+ + + R + L+N + P N L+ ++ P+ N
Sbjct: 329 NLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQ 388
Query: 101 HLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAP 160
L+N ++TP+++ + + + DL N ++ P E + L++ ++TP +
Sbjct: 389 SLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQ 448
Query: 161 QLENNGRLVP 170
LEN +++P
Sbjct: 449 DLENLIKVIP 458
Score = 33.1 bits (74), Expect = 0.20
Identities = 24/132 (18%), Positives = 54/132 (40%)
Query: 53 ENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDL 112
+ N + +LE+ ++ + R + L+N + P N L+ ++ P+
Sbjct: 321 DKNEKGRQNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPET 380
Query: 113 ENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHL 172
N L+N ++TP ++ + + + L N ++ P E + L++ ++ P
Sbjct: 381 NKNITRGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPER 440
Query: 173 ENNGRLTPHLEN 184
+ LEN
Sbjct: 441 NRTNQGNQDLEN 452
Score = 31.6 bits (70), Expect = 0.59
Identities = 30/173 (17%), Positives = 68/173 (39%)
Query: 32 LEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPD 91
+E A LE+ ++ + +G+ L + ++ + N + +LE+ ++
Sbjct: 280 VEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVNAR 339
Query: 92 LENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPH 151
+ + L+N + P N DL+ ++ P N L+N ++TP
Sbjct: 340 MNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQSLDNLIKVTPE 399
Query: 152 LENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLEN 204
++ + + + L N ++ P E + L++ + P + LEN
Sbjct: 400 VKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLEN 452
Score = 29.3 bits (64), Expect = 3.0
Identities = 26/149 (17%), Positives = 60/149 (40%)
Query: 57 RLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNG 116
R P +E + + LE+ ++ + G+ L + + + N + +LE+
Sbjct: 275 RANPKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVA 334
Query: 117 RLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNG 176
++ + R + L+N + P N L+ ++ P+ N L+N
Sbjct: 335 KVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQSLDNLI 394
Query: 177 RLTPHLENNGPLAPHLENNGRLAPQLENN 205
++TP ++ + + L N ++ P E +
Sbjct: 395 KVTPEVKRSNQGSKDLNNFIKVYPGTEKS 423
>gi|238908497 sciellin isoform 2 [Homo sapiens]
Length = 668
Score = 36.6 bits (83), Expect = 0.018
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 65 KGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLEN 124
KGR +LE+ ++ + R + DL+N + P N DL+ ++ P+
Sbjct: 305 KGR--QNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNK 362
Query: 125 NGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLEN 184
N L+N ++TP ++ + + + L N ++ P E + L++ ++TP
Sbjct: 363 NITRGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNR 422
Query: 185 NGPLAPHLENNGRLAPQLENNGIMGTE 211
LEN ++ P + G +
Sbjct: 423 TNQGNQDLENLIKVIPSANKSSEQGLD 449
Score = 35.0 bits (79), Expect = 0.054
Identities = 26/130 (20%), Positives = 57/130 (43%)
Query: 41 HLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTP 100
+LE+ + + R + L+N + P N L+ ++ P+ N
Sbjct: 309 NLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQ 368
Query: 101 HLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAP 160
L+N ++TP+++ + + + DL N ++ P E + L++ ++TP +
Sbjct: 369 SLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQ 428
Query: 161 QLENNGRLVP 170
LEN +++P
Sbjct: 429 DLENLIKVIP 438
Score = 33.1 bits (74), Expect = 0.20
Identities = 24/132 (18%), Positives = 54/132 (40%)
Query: 53 ENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDL 112
+ N + +LE+ ++ + R + L+N + P N L+ ++ P+
Sbjct: 301 DKNEKGRQNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPET 360
Query: 113 ENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHL 172
N L+N ++TP ++ + + + L N ++ P E + L++ ++ P
Sbjct: 361 NKNITRGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPER 420
Query: 173 ENNGRLTPHLEN 184
+ LEN
Sbjct: 421 NRTNQGNQDLEN 432
Score = 31.6 bits (70), Expect = 0.59
Identities = 30/173 (17%), Positives = 68/173 (39%)
Query: 32 LEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPD 91
+E A LE+ ++ + +G+ L + ++ + N + +LE+ ++
Sbjct: 260 VEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVNAR 319
Query: 92 LENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPH 151
+ + L+N + P N DL+ ++ P N L+N ++TP
Sbjct: 320 MNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQSLDNLIKVTPE 379
Query: 152 LENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLEN 204
++ + + + L N ++ P E + L++ + P + LEN
Sbjct: 380 VKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLEN 432
Score = 29.3 bits (64), Expect = 3.0
Identities = 26/149 (17%), Positives = 60/149 (40%)
Query: 57 RLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNG 116
R P +E + + LE+ ++ + G+ L + + + N + +LE+
Sbjct: 255 RANPKVEEREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVA 314
Query: 117 RLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNG 176
++ + R + L+N + P N L+ ++ P+ N L+N
Sbjct: 315 KVNARMNKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQSLDNLI 374
Query: 177 RLTPHLENNGPLAPHLENNGRLAPQLENN 205
++TP ++ + + L N ++ P E +
Sbjct: 375 KVTPEVKRSNQGSKDLNNFIKVYPGTEKS 403
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.4 bits (80), Expect = 0.041
Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 79 TPHLENKGRLTPDLENNGCLTPHLENNG-RLTPDLENNGRLTPDLENNGRLTPHLENNGR 137
TP ++ +P+L NN CLTP E +G + D + R + + L+
Sbjct: 1492 TPRPRSRSPSSPEL-NNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPS 1550
Query: 138 LTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGR 197
+P + +P + R + + P +++ RL+P +G +P +++ R
Sbjct: 1551 ASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGS-SPEVKDKPR 1609
Query: 198 LAPQLEN 204
AP+ ++
Sbjct: 1610 AAPRAQS 1616
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 34.7 bits (78), Expect = 0.070
Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 8/162 (4%)
Query: 50 PHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLT 109
P +G ++ +G L ++E G +E +GR+ ++ G ++ G L
Sbjct: 148 PEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLG 207
Query: 110 PDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLV 169
+++ G ++ GR+ ++ G ++ GR+ +E +E
Sbjct: 208 DNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAG 267
Query: 170 PHLENNGRLTPHLENNGPLA--------PHLENNGRLAPQLE 203
+E G ++ GP P +G L+PQ E
Sbjct: 268 DSVEAEGPAGDSMDAEGPAGRARRVSGEPQQSGDGSLSPQAE 309
Score = 32.7 bits (73), Expect = 0.27
Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 59 APHLENKGRLTPHLEN---NGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENN 115
AP + + P + +G ++ +G L ++E G +E GR+ ++
Sbjct: 134 APERQEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAE 193
Query: 116 GRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENN 175
G ++ G L +++ G ++ GR+ ++ G ++ GR+ +E
Sbjct: 194 GPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAG 253
Query: 176 GRLTPHLENNGPLAPHLENNGRLAPQLENNGIMG 209
+E P +E G ++ G G
Sbjct: 254 DPAGDGVEAGVPAGDSVEAEGPAGDSMDAEGPAG 287
Score = 32.7 bits (73), Expect = 0.27
Identities = 26/140 (18%), Positives = 50/140 (35%)
Query: 80 PHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLT 139
P G ++ G L ++E G +E GR+ ++ G ++ G L
Sbjct: 148 PEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLG 207
Query: 140 PHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLA 199
+++ G ++ GR+ ++ G ++ GR+ +E P +E
Sbjct: 208 DNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAG 267
Query: 200 PQLENNGIMGTEHPTWGVTG 219
+E G G G G
Sbjct: 268 DSVEAEGPAGDSMDAEGPAG 287
Score = 30.0 bits (66), Expect = 1.7
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 2/168 (1%)
Query: 26 QPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENK 85
+P + G ++ G L ++E G +E +GR+ ++ G ++ +
Sbjct: 144 RPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAE 203
Query: 86 GRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENN 145
G L +++ G ++ GR+ ++ G ++ GR+ +E +E
Sbjct: 204 GPLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAG 263
Query: 146 GRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLE 193
+E G ++ G +G P +G L+P E
Sbjct: 264 VPAGDSVEAEGPAGDSMDAEGPAGRARRVSGE--PQQSGDGSLSPQAE 309
>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
sapiens]
Length = 134
Score = 31.6 bits (70), Expect = 0.59
Identities = 24/96 (25%), Positives = 40/96 (41%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ +GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGI 96
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
+E N E NG + NGR ++ +G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNV 120
Query: 192 LENNGRLAPQLENNGI 207
+E NG ++ NGI
Sbjct: 121 IECNG-----MQKNGI 131
Score = 28.9 bits (63), Expect = 3.9
Identities = 31/134 (23%), Positives = 52/134 (38%)
Query: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E N E NG + NGR ++ +G +NG +E N
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNV 120
Query: 172 LENNGRLTPHLENN 185
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
Score = 28.5 bits (62), Expect = 5.0
Identities = 29/134 (21%), Positives = 53/134 (39%)
Query: 62 LENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPD 121
+E+ G + + N +E+ G ++E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 122 LENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPH 181
+E N E NG + NGR ++ +G +NG + +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNV 120
Query: 182 LENNGPLAPHLENN 195
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 31.2 bits (69), Expect = 0.78
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 50 PHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLE----NN 105
P V NG+ AP L LEN + P +E K EN +P E N
Sbjct: 936 PTVLGNGKQAPSLSLPVNGVTVLENGDQRAPGIEEKA-----AENGALGSPEREEKVLEN 990
Query: 106 GRLTPD------LENNGRLTPDLEN----NGRLTP 130
G LTP LEN +P+ NG LTP
Sbjct: 991 GELTPPRREEKALENGELRSPEAGEKVLVNGGLTP 1025
>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
Length = 134
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 28.9 bits (63), Expect = 3.9
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 192 LENNGRLAPQLENNGI 207
+E NG ++ NGI
Sbjct: 121 IECNG-----MQKNGI 131
Score = 27.7 bits (60), Expect = 8.6
Identities = 31/134 (23%), Positives = 51/134 (38%)
Query: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E N E NG + NGR ++ G +NG +E N
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 172 LENNGRLTPHLENN 185
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
sapiens]
Length = 134
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 28.9 bits (63), Expect = 3.9
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 192 LENNGRLAPQLENNGI 207
+E NG ++ NGI
Sbjct: 121 IECNG-----MQKNGI 131
Score = 27.7 bits (60), Expect = 8.6
Identities = 31/134 (23%), Positives = 51/134 (38%)
Query: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E N E NG + NGR ++ G +NG +E N
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 172 LENNGRLTPHLENN 185
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
sapiens]
Length = 167
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 29.6 bits (65), Expect = 2.3
Identities = 30/130 (23%), Positives = 50/130 (38%)
Query: 82 LENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPH 141
+E+ G + + N +E+NG ++E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 142 LENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQ 201
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 202 LENNGIMGTE 211
+E NG+ E
Sbjct: 121 IECNGMQKME 130
>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
Length = 155
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 28.5 bits (62), Expect = 5.0
Identities = 29/125 (23%), Positives = 48/125 (38%)
Query: 82 LENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPH 141
+E+ G + + N +E+NG ++E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 142 LENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQ 201
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 202 LENNG 206
+E NG
Sbjct: 121 IECNG 125
>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
sapiens]
Length = 134
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 28.9 bits (63), Expect = 3.9
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 192 LENNGRLAPQLENNGI 207
+E NG ++ NGI
Sbjct: 121 IECNG-----MQKNGI 131
Score = 27.7 bits (60), Expect = 8.6
Identities = 31/134 (23%), Positives = 51/134 (38%)
Query: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E N E NG + NGR ++ G +NG +E N
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 172 LENNGRLTPHLENN 185
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
sapiens]
Length = 134
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
+E N E NG + NGR ++ GI
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
Score = 28.9 bits (63), Expect = 3.9
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 192 LENNGRLAPQLENNGI 207
+E NG ++ NGI
Sbjct: 121 IECNG-----MQKNGI 131
Score = 27.7 bits (60), Expect = 8.6
Identities = 31/134 (23%), Positives = 51/134 (38%)
Query: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
+E N E NG + NGR ++ G +NG +E N
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 172 LENNGRLTPHLENN 185
+E NG ++N+
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|4826659 F-actin capping protein beta subunit [Homo sapiens]
Length = 272
Score = 28.9 bits (63), Expect = 3.9
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 53 ENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLT---PHLENNGRLT 109
+++GR A H + + L+ N + + G LT +E + ++ PH+ N GRL
Sbjct: 159 KSSGRTA-HYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLV 217
Query: 110 PDLENNGRLT 119
D+EN R T
Sbjct: 218 EDMENKIRST 227
>gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 28.5 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 149 TPHLENNGRLAPQLENNG--RLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
T L ++ R +PQLE+ R +P L P L N G LAP + R A Q ++
Sbjct: 21 TRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGG-LAPRATSGSRAARQRPDSA 79
Query: 207 IMG 209
I+G
Sbjct: 80 ILG 82
>gi|169174331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 86 GRLTPDLENNGCL----TPHLENNGRLTPDLENNG 116
G+ P GC+ P LEN GRL D + NG
Sbjct: 20 GKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNG 54
Score = 27.7 bits (60), Expect = 8.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 189 APHLENNGRLAPQLENNG--IMGTEHPTW 215
AP LEN GRLA + NG + G H W
Sbjct: 37 APFLENGGRLAGDTQGNGSTLTGLLHCPW 65
>gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo
sapiens]
Length = 102
Score = 28.5 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 149 TPHLENNGRLAPQLENNG--RLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
T L ++ R +PQLE+ R +P L P L N G LAP + R A Q ++
Sbjct: 21 TRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGG-LAPRATSGSRAARQRPDSA 79
Query: 207 IMG 209
I+G
Sbjct: 80 ILG 82
>gi|169172659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 86 GRLTPDLENNGCL----TPHLENNGRLTPDLENNG 116
G+ P GC+ P LEN GRL D + NG
Sbjct: 20 GKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNG 54
Score = 27.7 bits (60), Expect = 8.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 189 APHLENNGRLAPQLENNG--IMGTEHPTW 215
AP LEN GRLA + NG + G H W
Sbjct: 37 APFLENGGRLAGDTQGNGSTLTGLLHCPW 65
>gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo
sapiens]
Length = 244
Score = 28.5 bits (62), Expect = 5.0
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 170 PHLENNGRLTPHLENNG-PLAPHLENNGRLAPQLENNGIMGTEHPTWGVTGTWHQTWRIM 228
P L +NG L+P +G P P L NG L+P +G ++PT V T + T ++
Sbjct: 40 PALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISG--SPQNPTLSVC-TRYITGAVV 96
Query: 229 GA 230
GA
Sbjct: 97 GA 98
>gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo
sapiens]
Length = 102
Score = 28.5 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 149 TPHLENNGRLAPQLENNG--RLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQLENNG 206
T L ++ R +PQLE+ R +P L P L N G LAP + R A Q ++
Sbjct: 21 TRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGG-LAPRATSGSRAARQRPDSA 79
Query: 207 IMG 209
I+G
Sbjct: 80 ILG 82
>gi|169172837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 86 GRLTPDLENNGCL----TPHLENNGRLTPDLENNG 116
G+ P GC+ P LEN GRL D + NG
Sbjct: 20 GKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNG 54
Score = 27.7 bits (60), Expect = 8.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 189 APHLENNGRLAPQLENNG--IMGTEHPTW 215
AP LEN GRLA + NG + G H W
Sbjct: 37 APFLENGGRLAGDTQGNGSTLTGLLHCPW 65
>gi|171460956 ubiquitin specific peptidase like 1 [Homo sapiens]
Length = 1092
Score = 28.1 bits (61), Expect = 6.6
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 115 NGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLEN 174
N ++PDLE TPH + LE++ + + L N+ + + +G V + ++
Sbjct: 87 NNLISPDLEECH--TPHKPQKRK---SLESSYKDSLLLANSKKTRNYIAIDGGKVLNSKH 141
Query: 175 NGRLTPHLENNGPLAPHLENNGRLAPQLENNGIM 208
NG + +N P + +N R A LE N I+
Sbjct: 142 NGEVYDETSSNLPDSSGQQNPIRTADSLERNEIL 175
>gi|117306178 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 28.1 bits (61), Expect = 6.6
Identities = 29/104 (27%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 26 QPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPH---LENNGRLTPHL 82
Q +LAHL+ A G H P K P L + L P L
Sbjct: 367 QHQLAHLQQMCSEASGTPAPGLTGKHAAGRELAGPGFVGKAPAYPQELCLAQSFHLKPPL 426
Query: 83 ENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNG 126
E TP NG P NG L NN TP+ +++G
Sbjct: 427 EKP---TPSPPVNGMAAPLAYPNGHYFQPLWNNILPTPNSDSSG 467
>gi|117306174 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 28.1 bits (61), Expect = 6.6
Identities = 29/104 (27%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 26 QPRLAHLEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPH---LENNGRLTPHL 82
Q +LAHL+ A G H P K P L + L P L
Sbjct: 367 QHQLAHLQQMCSEASGTPAPGLTGKHAAGRELAGPGFVGKAPAYPQELCLAQSFHLKPPL 426
Query: 83 ENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNG 126
E TP NG P NG L NN TP+ +++G
Sbjct: 427 EKP---TPSPPVNGMAAPLAYPNGHYFQPLWNNILPTPNSDSSG 467
>gi|145309311 ubiquitin specific protease 9, X-linked isoform 4
[Homo sapiens]
Length = 2554
Score = 27.7 bits (60), Expect = 8.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 83 ENKGRLTPDLENNGCLTPHLENNGRLTPDL--ENNGRLTPDLENNGRLTPHLENNGRLTP 140
+N+G+ PD G P L+ N +PD EN+ PD + G P LE+ P
Sbjct: 14 DNQGQ-APD----GQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFP 68
Query: 141 HLE 143
H +
Sbjct: 69 HTD 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,019,199
Number of Sequences: 37866
Number of extensions: 675803
Number of successful extensions: 1283
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 221
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.