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Search of human proteins with 239747902
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747902 PREDICTED: hypothetical protein [Homo sapiens]
(225 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164295 PREDICTED: hypothetical protein [Homo sapiens] 469 e-133
gi|239747902 PREDICTED: hypothetical protein [Homo sapiens] 469 e-133
gi|239741797 PREDICTED: hypothetical protein [Homo sapiens] 469 e-133
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 37 0.018
gi|7706501 WW domain binding protein 11 [Homo sapiens] 33 0.15
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 33 0.26
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 33 0.26
gi|4758532 ral guanine nucleotide dissociation stimulator-like 2... 32 0.44
gi|157688564 diacylglycerol kinase zeta isoform 4 [Homo sapiens] 32 0.57
gi|41872522 diacylglycerol kinase zeta isoform 1 [Homo sapiens] 32 0.57
gi|41872507 diacylglycerol kinase zeta isoform 2 [Homo sapiens] 32 0.57
gi|41872527 diacylglycerol kinase zeta isoform 3 [Homo sapiens] 32 0.57
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 32 0.57
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 32 0.57
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 32 0.57
gi|239749978 PREDICTED: hypothetical protein XP_002347247 [Homo ... 31 0.75
gi|4758630 potassium voltage-gated channel KQT-like protein 3 [H... 31 0.75
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 31 0.75
gi|124378039 SEC16 homolog A [Homo sapiens] 31 0.98
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 31 0.98
gi|53829376 plakophilin 4 isoform b [Homo sapiens] 30 1.3
gi|53829374 plakophilin 4 isoform a [Homo sapiens] 30 1.3
gi|168229256 ankyrin repeat domain 41 [Homo sapiens] 30 1.3
gi|148886716 downstream of Stk11 [Homo sapiens] 30 1.3
gi|21166382 neurexin 2 isoform beta precursor [Homo sapiens] 30 1.7
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 2.2
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 2.2
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ... 30 2.2
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [... 30 2.2
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 30 2.2
>gi|169164295 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 469 bits (1207), Expect = e-133
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE
Sbjct: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
Query: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV
Sbjct: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
Query: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH
Sbjct: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
Query: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT
Sbjct: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
>gi|239747902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 469 bits (1207), Expect = e-133
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE
Sbjct: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
Query: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV
Sbjct: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
Query: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH
Sbjct: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
Query: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT
Sbjct: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
>gi|239741797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 469 bits (1207), Expect = e-133
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE
Sbjct: 1 MGIRVINAEKWKQMRKETTLSKELAFLQSYLLESSPLEQEGAGFCVYTKIKPDMFKALTE 60
Query: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV
Sbjct: 61 QFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPV 120
Query: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH
Sbjct: 121 GPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHH 180
Query: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT
Sbjct: 181 PPSQASPFQLRSAVTADSSLKHPPKRGPWFLLSWTFPPSLFPWAT 225
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 36.6 bits (83), Expect = 0.018
Identities = 41/143 (28%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 89 AALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEETH 148
A L P R+VLP +P PG H S PR A G+ G G
Sbjct: 101 AGSLFPLRVVLPGIPAPGKH--------------HRVSGAPR---AHGTGAHGTGALRGD 143
Query: 149 FRRVHDLPRLLLTLAAGAGAGHRDTELGSGHHPPSQASPFQLRSAVTADSSLK------H 202
FR+ + P A+ G G G P P + + A SSL H
Sbjct: 144 FRQCRE-PARTPQAASRDGDGASPALSAPGREPGRGGRPARRTTQRAASSSLPPRRSEGH 202
Query: 203 P--PKRGPWFLLSWTFPPSLFPW 223
P P R P L W PP W
Sbjct: 203 PDAPHRSPRPLYRWLGPPPRRDW 225
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 33.5 bits (75), Expect = 0.15
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 46 VYTKIKPDMFKALTEQFKEKDNPGQRIVHYVQDVPNPERLKCDAALL-----LPGRLVLP 100
+Y K PD++K L + E + ++ Y V N + ++ ++ L P +++
Sbjct: 95 LYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQ 154
Query: 101 VLPTPGTR--FYLRRTCRQGP------VGPHSPSSLPRRSPAQGSVLPGPG 143
+P PG + L++T GP + P +PR P + P PG
Sbjct: 155 DIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPGPPPG 205
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.26
Identities = 33/107 (30%), Positives = 40/107 (37%), Gaps = 23/107 (21%)
Query: 80 PNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRR---------------TCRQGPVGPHS 124
P P L L+LP L LP PG+ RR + R GP GP S
Sbjct: 161 PRPLPLPLMLMLMLP---TLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGP-GPSS 216
Query: 125 PSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHR 171
PS+ P P PGP E + + P G+GAG R
Sbjct: 217 PSAAPTSHPPPSPACPGPEMETI----LRNPPARSPGAGWGSGAGRR 259
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.26
Identities = 33/107 (30%), Positives = 40/107 (37%), Gaps = 23/107 (21%)
Query: 80 PNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRR---------------TCRQGPVGPHS 124
P P L L+LP L LP PG+ RR + R GP GP S
Sbjct: 161 PRPLPLPLMLMLMLP---TLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGP-GPSS 216
Query: 125 PSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHR 171
PS+ P P PGP E + + P G+GAG R
Sbjct: 217 PSAAPTSHPPPSPACPGPEMETI----LRNPPARSPGAGWGSGAGRR 259
>gi|4758532 ral guanine nucleotide dissociation stimulator-like 2
[Homo sapiens]
Length = 777
Score = 32.0 bits (71), Expect = 0.44
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 9 EKWKQMRKETTLSKELAFLQSYL--LESSPLEQEGAGFCVYTKIKPDMFKALTEQFKEKD 66
EKW ++ +E L + + + + + L+SSP+ + A + T+ +F +L + F E+D
Sbjct: 333 EKWIRVAEECRLLRNFSSVYAVVSALQSSPIHRLRAAWGEATRDSLRVFSSLCQIFSEED 392
Query: 67 NPGQRIVHYVQDV 79
N Q VQ+V
Sbjct: 393 NYSQSRELLVQEV 405
>gi|157688564 diacylglycerol kinase zeta isoform 4 [Homo sapiens]
Length = 1117
Score = 31.6 bits (70), Expect = 0.57
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 32 LESSPLEQEGAGFCVYT--KIKPD--MFKALTEQFKEKDNPGQRIVHYVQDVPNPERLKC 87
+E E +GAG T K+ P A T + + Q ++YV ++ E
Sbjct: 880 IERLQQEPDGAGAKSPTCQKLSPKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYIL 939
Query: 88 DAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEET 147
D LL G P LPTP + P P SP+ PR QG P G+E
Sbjct: 940 DPELL--GASARPDLPTPTSPL---------PTSPCSPT--PRS--LQGDAAPPQGEELI 984
Query: 148 HFRRVHDLPRLLLTLAAGAGAGHRDTELGS-GHHPPSQAS 186
+ +D +L AG HRD + + HH S S
Sbjct: 985 EAAKRNDFCKLQELHRAGGDLMHRDEQSRTLLHHAVSTGS 1024
>gi|41872522 diacylglycerol kinase zeta isoform 1 [Homo sapiens]
Length = 945
Score = 31.6 bits (70), Expect = 0.57
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 32 LESSPLEQEGAGFCVYT--KIKPD--MFKALTEQFKEKDNPGQRIVHYVQDVPNPERLKC 87
+E E +GAG T K+ P A T + + Q ++YV ++ E
Sbjct: 708 IERLQQEPDGAGAKSPTCQKLSPKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYIL 767
Query: 88 DAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEET 147
D LL G P LPTP + P P SP+ PR QG P G+E
Sbjct: 768 DPELL--GASARPDLPTPTSPL---------PTSPCSPT--PRS--LQGDAAPPQGEELI 812
Query: 148 HFRRVHDLPRLLLTLAAGAGAGHRDTELGS-GHHPPSQAS 186
+ +D +L AG HRD + + HH S S
Sbjct: 813 EAAKRNDFCKLQELHRAGGDLMHRDEQSRTLLHHAVSTGS 852
>gi|41872507 diacylglycerol kinase zeta isoform 2 [Homo sapiens]
Length = 929
Score = 31.6 bits (70), Expect = 0.57
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 32 LESSPLEQEGAGFCVYT--KIKPD--MFKALTEQFKEKDNPGQRIVHYVQDVPNPERLKC 87
+E E +GAG T K+ P A T + + Q ++YV ++ E
Sbjct: 692 IERLQQEPDGAGAKSPTCQKLSPKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYIL 751
Query: 88 DAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEET 147
D LL G P LPTP + P P SP+ PR QG P G+E
Sbjct: 752 DPELL--GASARPDLPTPTSPL---------PTSPCSPT--PRS--LQGDAAPPQGEELI 796
Query: 148 HFRRVHDLPRLLLTLAAGAGAGHRDTELGS-GHHPPSQAS 186
+ +D +L AG HRD + + HH S S
Sbjct: 797 EAAKRNDFCKLQELHRAGGDLMHRDEQSRTLLHHAVSTGS 836
>gi|41872527 diacylglycerol kinase zeta isoform 3 [Homo sapiens]
Length = 895
Score = 31.6 bits (70), Expect = 0.57
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 32 LESSPLEQEGAGFCVYT--KIKPD--MFKALTEQFKEKDNPGQRIVHYVQDVPNPERLKC 87
+E E +GAG T K+ P A T + + Q ++YV ++ E
Sbjct: 658 IERLQQEPDGAGAKSPTCQKLSPKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYIL 717
Query: 88 DAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEET 147
D LL G P LPTP + P P SP+ PR QG P G+E
Sbjct: 718 DPELL--GASARPDLPTPTSPL---------PTSPCSPT--PRS--LQGDAAPPQGEELI 762
Query: 148 HFRRVHDLPRLLLTLAAGAGAGHRDTELGS-GHHPPSQAS 186
+ +D +L AG HRD + + HH S S
Sbjct: 763 EAAKRNDFCKLQELHRAGGDLMHRDEQSRTLLHHAVSTGS 802
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 31.6 bits (70), Expect = 0.57
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 79 VPNPERLKCDAALLLPGRLVLPVLP-------------TPGTRFYLRRTCRQGPVGPHSP 125
V NPER +AA P R++LP LP R L +GP P P
Sbjct: 476 VGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAP--P 533
Query: 126 SSLPRRSPAQGSVLPG 141
S+LP P S+ PG
Sbjct: 534 SALPGPRPRPDSLSPG 549
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 31.6 bits (70), Expect = 0.57
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 79 VPNPERLKCDAALLLPGRLVLPVLP-------------TPGTRFYLRRTCRQGPVGPHSP 125
V NPER +AA P R++LP LP R L +GP P P
Sbjct: 476 VGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAP--P 533
Query: 126 SSLPRRSPAQGSVLPG 141
S+LP P S+ PG
Sbjct: 534 SALPGPRPRPDSLSPG 549
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 31.6 bits (70), Expect = 0.57
Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 23/155 (14%)
Query: 68 PGQRIVHYVQDVPNPE-----RLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGP 122
PG R H++ ++P + R + D+ P P R RT +G G
Sbjct: 320 PGARRHHHLVNLPPSQTGLVRRSRTDSLAATP-----PAAKCSSCRV---RTASEGDGGA 371
Query: 123 HSPSSLPRRSPAQGSVLP-GPGKEETHFRRVHDLP--------RLLLTLAAGAGAGHRDT 173
+ ++ P + P PG R H L ++ L A GA R
Sbjct: 372 AAGAAAAGARPVSVAGSPLSPGPVRAPLSRSHTLSGGCGGRGSKVALLPAGGALQHSRSM 431
Query: 174 ELGSGHHPPSQASPFQLRSAVTADSSLKHPPKRGP 208
+ H PP+ SP L S+ + S +PP GP
Sbjct: 432 SMPVAHSPPAATSPGSLSSS-SGHGSGSYPPPPGP 465
>gi|239749978 PREDICTED: hypothetical protein XP_002347247 [Homo
sapiens]
Length = 388
Score = 31.2 bits (69), Expect = 0.75
Identities = 25/81 (30%), Positives = 34/81 (41%)
Query: 111 LRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGH 170
L+ CR GP + SSLP A + LP + E++ D R +LT A A
Sbjct: 195 LKGHCRHGPSLHNRASSLPGEVKATFTCLPIQLESESNRTTAVDTCRSILTGAVTASIVD 254
Query: 171 RDTELGSGHHPPSQASPFQLR 191
G HPP+ S L+
Sbjct: 255 STRFWQGGAHPPAPFSNCSLK 275
>gi|4758630 potassium voltage-gated channel KQT-like protein 3 [Homo
sapiens]
Length = 872
Score = 31.2 bits (69), Expect = 0.75
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 103 PTPGTRFYLRRTCRQGPVG--PHSPSSLPRRSPAQGSV-LPGPGKEETHFRRVHDLPRLL 159
P P F+ + P G H P +LPR P+ G V P T+ R LP +
Sbjct: 693 PEPPYSFHQVTIDKVSPYGFFAHDPVNLPRGGPSSGKVQATPPSSATTYVERPTVLP--I 750
Query: 160 LTLAAGAGAGHRDTELGSGHHPPSQASPFQLRSAVTADS 198
LTL + H +L + + SP Q RS +T DS
Sbjct: 751 LTLLDSRVSCHSQADLQGPY--SDRISPRQRRS-ITRDS 786
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 31.2 bits (69), Expect = 0.75
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 58 LTEQFKEKD-NPGQRIVHYVQDVPNPERL---KCDAALLLPGRLVLPVLPTPGTRFYLRR 113
+ EQ +EK+ PG + +P P L + L LP R P P R RR
Sbjct: 2326 IVEQLQEKEAGPG---LPAGPSLPQPRELPPGRLPNGLELPERTPRPDRPRARDRPKPRR 2382
Query: 114 TCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEETH 148
R G S R +PAQG P P TH
Sbjct: 2383 RPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPTH 2417
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 30.8 bits (68), Expect = 0.98
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 25/141 (17%)
Query: 77 QDVPNPERLKCDAALLLPGRLVLP---VLPTPGTRFYLRRTCRQGPVGPHSP-------S 126
Q P P +A +LP P V P P R R QGPV SP S
Sbjct: 673 QVCPLPLNSTTEAVHMLPHAGAPPLDTVYPAPEKRPSART---QGPVKCESPATTLWAQS 729
Query: 127 SLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSGHHPPSQAS 186
LP G+VL P + P + A +G R+ PS A+
Sbjct: 730 ELPDFG---GNVLLAPAAPALYVCAKPQPPVVQPPEEAMSGQQSRN---------PSSAA 777
Query: 187 PFQLRSAVTADSSLKHPPKRG 207
P Q R + A +L++PPK G
Sbjct: 778 PVQSRGGIGASENLENPPKMG 798
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 30.8 bits (68), Expect = 0.98
Identities = 37/134 (27%), Positives = 44/134 (32%), Gaps = 26/134 (19%)
Query: 98 VLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPR 157
VLP +P PG H S PR A G+ G G FR+ + P
Sbjct: 118 VLPGIPAPGKH--------------HRVSGAPR---AHGTGAHGTGALRGDFRQCRE-PA 159
Query: 158 LLLTLAAGAGAGHRDTELGSGHHPPSQASPFQLRSAVTADSSLK------HP--PKRGPW 209
A+ G G G P P + + A SSL HP P R P
Sbjct: 160 RTPQAASRDGDGASPALSAPGREPGRGGRPARRTTQRAASSSLPPRRSEGHPDAPHRSPR 219
Query: 210 FLLSWTFPPSLFPW 223
L W PP W
Sbjct: 220 PLYRWLGPPPRRDW 233
>gi|53829376 plakophilin 4 isoform b [Homo sapiens]
Length = 1149
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 130 RRSPAQGSVLPGPGKEETHFRRVHDL------PRLLLTLAAGAGAGHRDTELGSGHHPPS 183
R S A+G L P RRV + P +++ G T LGSG PS
Sbjct: 190 RNSRAEGQTLVQPSVANRAMRRVSSVPSRAQSPSYVISTGVSPSRGSLRTSLGSGFGSPS 249
Query: 184 QASPFQLRSAVTADSSLKHPPKRGPW 209
P L + + ++L P+
Sbjct: 250 VTDPRPLNPSAYSSTTLPAARAASPY 275
>gi|53829374 plakophilin 4 isoform a [Homo sapiens]
Length = 1192
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 130 RRSPAQGSVLPGPGKEETHFRRVHDL------PRLLLTLAAGAGAGHRDTELGSGHHPPS 183
R S A+G L P RRV + P +++ G T LGSG PS
Sbjct: 190 RNSRAEGQTLVQPSVANRAMRRVSSVPSRAQSPSYVISTGVSPSRGSLRTSLGSGFGSPS 249
Query: 184 QASPFQLRSAVTADSSLKHPPKRGPW 209
P L + + ++L P+
Sbjct: 250 VTDPRPLNPSAYSSTTLPAARAASPY 275
>gi|168229256 ankyrin repeat domain 41 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 124 SPSSLPR--RSPAQGSV-LPGPGKEETHFRRVH------DLPRLLLTLAAGAGAGHRDTE 174
SPSS+P RSPA P PG + H H D+ L LT + G R+
Sbjct: 291 SPSSMPLLDRSPAHSPPRTPTPGASDCHCLWEHQTSIDSDMATLWLTEDEASSTGGREPV 350
Query: 175 LGSGHHPPSQASPFQLRSAVTADSSLKHP 203
H P S S +L + A HP
Sbjct: 351 GPCRHLPVSTVSDLELLKGLRALGENPHP 379
>gi|148886716 downstream of Stk11 [Homo sapiens]
Length = 447
Score = 30.4 bits (67), Expect = 1.3
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 59 TEQFKEKDNPGQRIVHYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQG 118
TEQ +E D P + + Y+ R A P + P G F + R G
Sbjct: 338 TEQ-EEGDAPQEDFIQYIA------RAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGG 390
Query: 119 PVGPHSPSSLPRRSPAQGSVLPGP 142
PVGP PS PRR P + S PGP
Sbjct: 391 PVGPCPPSPPPRR-PRERS--PGP 411
>gi|21166382 neurexin 2 isoform beta precursor [Homo sapiens]
Length = 666
Score = 30.0 bits (66), Expect = 1.7
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 119 PVGPHSPSSLPRRSPAQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGAGAGHRDTELGSG 178
P G P PRR PA LP P + LP LLL L A + L +
Sbjct: 2 PPGGSGPGGCPRRPPALAGPLPPPPPPPPP-PLLPLLPLLLLLLLGAAEGARVSSSLSTT 60
Query: 179 HH 180
HH
Sbjct: 61 HH 62
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 29.6 bits (65), Expect = 2.2
Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 74 HYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSP 133
H VQ PN + A ++ P V TPG+ + + P P P P P
Sbjct: 1639 HLVQQ-PNSHQQHSVAHVVGPVHAV-----TPGSHIHSQTAGHHLPPPPPPPGPAPHHHP 1692
Query: 134 AQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGA--GAGHRDTELGSGHHPPSQASPFQLR 191
G + H V+ P + +GH T + HHPP Q P
Sbjct: 1693 PPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPS 1752
Query: 192 SA 193
SA
Sbjct: 1753 SA 1754
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 29.6 bits (65), Expect = 2.2
Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 74 HYVQDVPNPERLKCDAALLLPGRLVLPVLPTPGTRFYLRRTCRQGPVGPHSPSSLPRRSP 133
H VQ PN + A ++ P V TPG+ + + P P P P P
Sbjct: 1639 HLVQQ-PNSHQQHSVAHVVGPVHAV-----TPGSHIHSQTAGHHLPPPPPPPGPAPHHHP 1692
Query: 134 AQGSVLPGPGKEETHFRRVHDLPRLLLTLAAGA--GAGHRDTELGSGHHPPSQASPFQLR 191
G + H V+ P + +GH T + HHPP Q P
Sbjct: 1693 PPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPS 1752
Query: 192 SA 193
SA
Sbjct: 1753 SA 1754
>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
sapiens]
Length = 1899
Score = 29.6 bits (65), Expect = 2.2
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 93 LPGRLVLPVLP-------TPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKE 145
LPGR P LP PG R + + GP GP P P SP PGK
Sbjct: 1655 LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSP-GSPGVTGPSGKPGKP 1713
Query: 146 ETHFR 150
H R
Sbjct: 1714 GDHGR 1718
>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
sapiens]
Length = 3063
Score = 29.6 bits (65), Expect = 2.2
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 93 LPGRLVLPVLP-------TPGTRFYLRRTCRQGPVGPHSPSSLPRRSPAQGSVLPGPGKE 145
LPGR P LP PG R + + GP GP P P SP PGK
Sbjct: 2819 LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSP-GSPGVTGPSGKPGKP 2877
Query: 146 ETHFR 150
H R
Sbjct: 2878 GDHGR 2882
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 115 CRQGPVGPHSPSSLPRRSPAQGSV-LPG 141
C GP+GP P LP R ++G + LPG
Sbjct: 494 CEPGPMGPPGPPGLPGRQGSKGDLGLPG 521
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,319,413
Number of Sequences: 37866
Number of extensions: 653641
Number of successful extensions: 2420
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 2378
Number of HSP's gapped (non-prelim): 115
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.