BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|117414148 hypothetical protein LOC221322 [Homo sapiens] (1257 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|117414148 hypothetical protein LOC221322 [Homo sapiens] 2536 0.0 gi|92110019 hypothetical protein LOC55672 [Homo sapiens] 37 0.12 gi|33946313 ninein isoform 4 [Homo sapiens] 37 0.16 gi|33946321 ninein isoform 5 [Homo sapiens] 37 0.16 gi|148536871 ninein isoform 1 [Homo sapiens] 37 0.16 gi|148536869 ninein isoform 2 [Homo sapiens] 37 0.16 gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 35 0.45 gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 35 0.45 gi|41281996 HEAT repeat containing 3 [Homo sapiens] 35 0.59 gi|169164497 PREDICTED: hypothetical protein [Homo sapiens] 34 1.0 gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 33 1.3 gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 1.7 gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 33 1.7 gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 33 2.2 gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap... 32 2.9 gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens] 32 2.9 gi|22035616 oxysterol-binding protein-like protein 7 [Homo sapiens] 32 2.9 gi|19923268 protein-kinase, interferon-inducible double stranded... 32 3.8 gi|54292123 lysosomal trafficking regulator [Homo sapiens] 32 3.8 gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 32 3.8 gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo... 32 5.0 gi|162809334 pregnancy-zone protein [Homo sapiens] 32 5.0 gi|55770834 centromere protein F [Homo sapiens] 32 5.0 gi|239750932 PREDICTED: hypothetical protein [Homo sapiens] 31 6.5 gi|223941912 coiled-coil domain containing 135 [Homo sapiens] 31 6.5 gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 31 6.5 gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 31 6.5 gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 31 6.5 gi|109637791 transcription factor-like nuclear regulator [Homo s... 31 6.5 gi|27883882 P18SRP protein [Homo sapiens] 31 6.5 >gi|117414148 hypothetical protein LOC221322 [Homo sapiens] Length = 1257 Score = 2536 bits (6572), Expect = 0.0 Identities = 1257/1257 (100%), Positives = 1257/1257 (100%) Query: 1 MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR 60 MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR Sbjct: 1 MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR 60 Query: 61 QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA 120 QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA Sbjct: 61 QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA 120 Query: 121 VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ 180 VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ Sbjct: 121 VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ 180 Query: 181 LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT 240 LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT Sbjct: 181 LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT 240 Query: 241 FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK 300 FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK Sbjct: 241 FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK 300 Query: 301 EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM 360 EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM Sbjct: 301 EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM 360 Query: 361 HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL 420 HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL Sbjct: 361 HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL 420 Query: 421 GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP 480 GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP Sbjct: 421 GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP 480 Query: 481 KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN 540 KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN Sbjct: 481 KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN 540 Query: 541 CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF 600 CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF Sbjct: 541 CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF 600 Query: 601 SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS 660 SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS Sbjct: 601 SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS 660 Query: 661 DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV 720 DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV Sbjct: 661 DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV 720 Query: 721 SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD 780 SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD Sbjct: 721 SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD 780 Query: 781 PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA 840 PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA Sbjct: 781 PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA 840 Query: 841 KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW 900 KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW Sbjct: 841 KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW 900 Query: 901 PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP 960 PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP Sbjct: 901 PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP 960 Query: 961 DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG 1020 DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG Sbjct: 961 DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG 1020 Query: 1021 KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD 1080 KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD Sbjct: 1021 KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD 1080 Query: 1081 KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP 1140 KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP Sbjct: 1081 KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP 1140 Query: 1141 LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200 LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL Sbjct: 1141 LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200 Query: 1201 QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST 1257 QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST Sbjct: 1201 QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST 1257 >gi|92110019 hypothetical protein LOC55672 [Homo sapiens] Length = 1214 Score = 37.0 bits (84), Expect = 0.12 Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 7/181 (3%) Query: 33 LECAEEILLHLEETDENFHNYE---FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECG 89 LE E++ L E + F N + FV L + N EE E + E Sbjct: 289 LEMNEKLRPQLAEKKQQFRNLKEKCFVTQLAGFLANQQNKYKYEECEDLIKSMLRNERQF 348 Query: 90 YDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH 149 + + + K+ +E ++YK ++H + + + E + + + NQ Q + ++ Sbjct: 349 KEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNQHLQALLTPDEPD 408 Query: 150 SYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRY-EALQTLCSAPPSDVLNC 208 D L + + Q +Q + + D + ++V+ EA + L S+ P +V Sbjct: 409 K---SQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKA 465 Query: 209 E 209 E Sbjct: 466 E 466 Score = 33.9 bits (76), Expect = 1.0 Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 7/181 (3%) Query: 33 LECAEEILLHLEETDENFHNYE---FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECG 89 LE E++ L E + F N + FV L + N EE + + E Sbjct: 18 LEINEKLRPQLAENKQQFRNLKEKCFVTQLAGFLANRQKKYKYEECKDLIKFMLRNERQF 77 Query: 90 YDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH 149 + + + K+ +E ++YK ++H + + + E + + + NQ Q + ++ Sbjct: 78 KEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNQHLQALLTPDEPD 137 Query: 150 SYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRY-EALQTLCSAPPSDVLNC 208 D L + + Q +Q + + D + ++V+ EA + L S+ P +V Sbjct: 138 K---SQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKA 194 Query: 209 E 209 E Sbjct: 195 E 195 >gi|33946313 ninein isoform 4 [Homo sapiens] Length = 2096 Score = 36.6 bits (83), Expect = 0.16 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%) Query: 12 LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71 L+A L + S + + G S EE + L + E FH + + +H ++ Sbjct: 733 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 786 Query: 72 EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129 +EE+ K +++Q E + G + + + +RT + + +++ + + ++S+ ++ Sbjct: 787 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 846 Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168 ++ + + Q+R++K Q E T C+++ L ++ K Sbjct: 847 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 887 >gi|33946321 ninein isoform 5 [Homo sapiens] Length = 2090 Score = 36.6 bits (83), Expect = 0.16 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%) Query: 12 LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71 L+A L + S + + G S EE + L + E FH + + +H ++ Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780 Query: 72 EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129 +EE+ K +++Q E + G + + + +RT + + +++ + + ++S+ ++ Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840 Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168 ++ + + Q+R++K Q E T C+++ L ++ K Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881 >gi|148536871 ninein isoform 1 [Homo sapiens] Length = 2046 Score = 36.6 bits (83), Expect = 0.16 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%) Query: 12 LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71 L+A L + S + + G S EE + L + E FH + + +H ++ Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780 Query: 72 EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129 +EE+ K +++Q E + G + + + +RT + + +++ + + ++S+ ++ Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840 Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168 ++ + + Q+R++K Q E T C+++ L ++ K Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881 >gi|148536869 ninein isoform 2 [Homo sapiens] Length = 2133 Score = 36.6 bits (83), Expect = 0.16 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%) Query: 12 LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71 L+A L + S + + G S EE + L + E FH + + +H ++ Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780 Query: 72 EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129 +EE+ K +++Q E + G + + + +RT + + +++ + + ++S+ ++ Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840 Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168 ++ + + Q+R++K Q E T C+++ L ++ K Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881 >gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] Length = 237 Score = 35.0 bits (79), Expect = 0.45 Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 99 KRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSD 158 KR ++ KE K+ Y + + S + EDE + Q +++K +K +SH + S+ Sbjct: 80 KRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSE 139 Query: 159 SDSSLNQSYK 168 ++S S K Sbjct: 140 TESDSKDSLK 149 Score = 31.6 bits (70), Expect = 5.0 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 90 YDTVVQQVTKRTQESK---EYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKE 146 ++ V +Q+ K+ + SK E++E M+ + + E ++ ++R+KK +K+ Sbjct: 31 WEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKK-EKK 89 Query: 147 KSHSYRTDNCSDSDSSLNQS 166 KS Y + + S SDSS + S Sbjct: 90 KSGRYSSSSSSSSDSSSSSS 109 >gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] Length = 247 Score = 35.0 bits (79), Expect = 0.45 Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 99 KRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSD 158 KR ++ KE K+ Y + + S + EDE + Q +++K +K +SH + S+ Sbjct: 90 KRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSE 149 Query: 159 SDSSLNQSYK 168 ++S S K Sbjct: 150 TESDSKDSLK 159 Score = 31.6 bits (70), Expect = 5.0 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 90 YDTVVQQVTKRTQESK---EYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKE 146 ++ V +Q+ K+ + SK E++E M+ + + E ++ ++R+KK +K+ Sbjct: 41 WEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKK-EKK 99 Query: 147 KSHSYRTDNCSDSDSSLNQS 166 KS Y + + S SDSS + S Sbjct: 100 KSGRYSSSSSSSSDSSSSSS 119 >gi|41281996 HEAT repeat containing 3 [Homo sapiens] Length = 680 Score = 34.7 bits (78), Expect = 0.59 Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 42/210 (20%) Query: 91 DTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHS 150 + V+Q TQ K E L+N + + E+DE +++++++ + Sbjct: 290 EMVIQMKEAETQRLKTAAEAEEILENT------NGDDLIEDDEMEGISHKRRVRRK---T 340 Query: 151 YRTDNCSDSDSSLNQSYKFC---QGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLN 207 + +D +D L ++ Q L++I++ C+ PSD Sbjct: 341 FVSDLLPPTDKELRETIALLTAQQTALEIIVNMC----------------CNEDPSD--- 381 Query: 208 CENWTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSR 267 + W L S SD F + C L SPL ++ E++T+L YL + Sbjct: 382 -DEWEEL------SSSDESDAFMENSFSECGGQ-LFSPLCLSHEVHTALTNYLIPKKIFE 433 Query: 268 ENHIPTLSAGVDI--TNPNMTRLLKKVRLL 295 + P S VD+ NP L++K+ + Sbjct: 434 KTAFPN-SIAVDLCSRNPTWKPLIRKMNTI 462 >gi|169164497 PREDICTED: hypothetical protein [Homo sapiens] Length = 228 Score = 33.9 bits (76), Expect = 1.0 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 9/101 (8%) Query: 1123 VYFCSTHYIEMLLKAELPLVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATC- 1181 VY C+ YI + + + HM + + +C+ ++ C + ++ IC YI C Sbjct: 104 VYLCTYVYIYVYICMHI-----CVHMYAYMCTYVCI-YVYICIHMCISYVYICVYIYICI 157 Query: 1182 -VFLGPDYQVYICIAVFKHLQQDILQHTQTQD-LQVFLKEE 1220 +F+ ++I I ++ H+ + H T + +F ++E Sbjct: 158 HIFVHVYIHIHIYIYIYVHIYVYVYIHIHTHTYIYIFFEKE 198 >gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] Length = 1411 Score = 33.5 bits (75), Expect = 1.3 Identities = 80/372 (21%), Positives = 141/372 (37%), Gaps = 67/372 (18%) Query: 10 AMLQAMLRRLFQSVKEKITGAPSLE-----------------------------CAEEIL 40 A LQ L RL + +KEK+T + L+ E++L Sbjct: 456 ADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVL 515 Query: 41 LHLEETDENFHNYE-FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTK 99 + + D+ N E ++ +++I S++E+E E + GE G V+ Q+ Sbjct: 516 RQIGDKDQKIQNLEALLQKSKENI-----SLLEKEREDLYAKIQAGE--GETAVLNQL-- 566 Query: 100 RTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH----SYRTDN 155 +E H L+ + + E + N+ E + + ++Q++K+H R + Sbjct: 567 --------QEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLS 618 Query: 156 CSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLN-----CEN 210 S + LN + K+ + Q+ + EA +T A + L+ ++ Sbjct: 619 LETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQD 678 Query: 211 WTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSRENH 270 K+T L D+ + C+Q L S L KE Y SL + E E Sbjct: 679 KQQELNKITTQLDQVTAKLQDK-QEHCSQ--LESHLKEYKEKYLSLEQKTEEL----EGQ 731 Query: 271 IPTLSAG---VDITNPNMTRLLKKVRLLNEYQKEAPSFWIRHPEKYMEEIVESTLSLLTV 327 I L A V + + L++ R LN E + + + +EIV ST L Sbjct: 732 IKKLEADSLEVKASKEQALQDLQQQRQLNT-DLELRATELSKQLEMEKEIVSSTRLDLQK 790 Query: 328 KHNQSHVVSQKI 339 K + QK+ Sbjct: 791 KSEALESIKQKL 802 >gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] Length = 1960 Score = 33.1 bits (74), Expect = 1.7 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 9/127 (7%) Query: 21 QSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTS 80 Q + EK+ L+ E+ EE K + I + L + +EEE E+C Sbjct: 877 QLMAEKLQLQEQLQAETELCAEAEELRARL---TAKKQELEEICHDLEARVEEEEERC-- 931 Query: 81 DRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQ 140 Q E+ +Q++ ++ +E + ++ + K E+ + K EE++ +++ Sbjct: 932 QHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEK----VTTEAKLKKLEEEQIILEDQN 987 Query: 141 KKIQKEK 147 K+ KEK Sbjct: 988 CKLAKEK 994 >gi|46852390 coiled-coil domain containing 6 [Homo sapiens] Length = 474 Score = 33.1 bits (74), Expect = 1.7 Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 14/146 (9%) Query: 61 QHIGNTLGSMIE---EEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNI 117 + I NTL I+ +E E + + EE + + +++ + E E ++ + + Sbjct: 110 EFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEF 169 Query: 118 MIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLI 177 + + I K E D Q +++++EK D +++L Q + +L Sbjct: 170 QVNKLMKKIKKLENDTISKQLTLEQLRREK---------IDLENTLEQEQEALVNRLWKR 220 Query: 178 LDQLDPGQPKEVRYEALQTLCSAPPS 203 +D+L+ K + E L SAPPS Sbjct: 221 MDKLE--AEKRILQEKLDQPVSAPPS 244 >gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] Length = 2964 Score = 32.7 bits (73), Expect = 2.2 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 51 HNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEM 110 H++E V + L S+ E+ KC R + YD + +Q KR K+Y ++ Sbjct: 1225 HSFEHVSLIPPETSTVLSSLKEKHKHKC--KRRNHDYLSYDKMKRQKRKR---KKKYPQL 1279 Query: 111 MHYLKNIMIAVVESMINKFEE 131 + IA +E +I++ E Sbjct: 1280 RNRQDPDFIAELEELISRLSE 1300 >gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sapiens] Length = 432 Score = 32.3 bits (72), Expect = 2.9 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 124 SMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC-QGKL---QLILD 179 S++N+ +E+ R QE + + Q+E+ H C + Q + C Q KL + +L+ Sbjct: 191 SLLNRRQEERLREQEERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLE 250 Query: 180 QLDPGQPKEVRYEALQTL 197 +++ +E R E + L Sbjct: 251 EVEKLLEQERRQEEQERL 268 >gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens] Length = 257 Score = 32.3 bits (72), Expect = 2.9 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 907 PLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKPD 961 P P+ L D GI++ +D+ K LL L++++K+ E ++ Q QF K + A P+ Sbjct: 67 PPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKK-EMLKIKQEQFMKKIVANPE 120 >gi|22035616 oxysterol-binding protein-like protein 7 [Homo sapiens] Length = 842 Score = 32.3 bits (72), Expect = 2.9 Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 532 MKGNEASPNCSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKK 591 MKG E +P S+T+++ +A E L+ N S EE + I S++ Sbjct: 379 MKGRELTPQLSQTSILSLADSHTEFFDACEVLLSASSSENEGSEEEESCTSEITTSLSEE 438 Query: 592 LLD 594 +LD Sbjct: 439 MLD 441 >gi|19923268 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Homo sapiens] Length = 761 Score = 32.0 bits (71), Expect = 3.8 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 202 PSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLE 261 P D C+ W C + L D P ++ + CA+ F S + T T L Sbjct: 25 PRDPARCQKWVENCRR--ADLEDKTPDQLNKHYRLCAKHFETSMICRTSPYRTVL----- 77 Query: 262 SYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNE 297 R+N IPT+ N +R K+++ L+E Sbjct: 78 -----RDNAIPTIFDLTSHLNNPHSRHRKRIKELSE 108 >gi|54292123 lysosomal trafficking regulator [Homo sapiens] Length = 3801 Score = 32.0 bits (71), Expect = 3.8 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 9/122 (7%) Query: 51 HNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEM 110 H + V YL + I N G + EEE+ N + CG+ + + + K KE Sbjct: 2787 HGAKLVLYLSELIHNHQGELTEEELGTAELLMNALKLCGHKCIPPSASTKADLIKMIKEE 2846 Query: 111 MHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC 170 + E +NK +T N +Q Q+ S ++ + S + + Q+ Sbjct: 2847 QKKYE------TEEGVNKAAWQKTVNNNQQSLFQRLDS---KSKDISKIAADITQAVSLS 2897 Query: 171 QG 172 QG Sbjct: 2898 QG 2899 >gi|116517224 coiled-coil domain containing 144B [Homo sapiens] Length = 725 Score = 32.0 bits (71), Expect = 3.8 Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 24/148 (16%) Query: 42 HLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEME-KCTSDRNQGEECG----YDTVVQQ 96 H+ TD NFHN K R T+ ++E + + T + NQ + G Y ++ + Sbjct: 413 HIFSTDNNFHNDASTKKARNPEVVTVEMKEDQEFDLQMTKNMNQNSDSGSTNNYKSLKPK 472 Query: 97 V---------TKRTQE---SKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQ 144 + + RT E +E ++ M KN + + E + +E+ ++E +++++ Sbjct: 473 LENLSSLPPDSDRTSEVYLHEELQQDMQKFKNEVNTLEEEFLALKKENVQLHKEVEEEME 532 Query: 145 KEKSHSYR-----TDNCS--DSDSSLNQ 165 K +S+S TD + + D LNQ Sbjct: 533 KHRSNSTELSGTLTDGTTVGNDDDGLNQ 560 >gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo sapiens] Length = 248 Score = 31.6 bits (70), Expect = 5.0 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 17/137 (12%) Query: 71 IEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFE 130 I+E KC +E G D V + K + + L + E I + Sbjct: 68 IQEAYGKC-------KEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120 Query: 131 EDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVR 190 D + ++ ++ + QKEK + +SD ++ K Q KL+L+ + G P Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSD---EEAPKTAQKKLKLVRTSPEYGMPS--- 174 Query: 191 YEALQTLCSAPPSDVLN 207 T S PSDVL+ Sbjct: 175 ----VTFGSVHPSDVLD 187 >gi|162809334 pregnancy-zone protein [Homo sapiens] Length = 1482 Score = 31.6 bits (70), Expect = 5.0 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 10/125 (8%) Query: 475 YSPSCPKMTSAAHSE-NYSPASM-----VTEVLWILSDQKECAVECLYNNIVIETLLQPI 528 +SP+ S AH + +P S+ V + + ++ + E +V +YN + ++ L Sbjct: 568 FSPAQSPPASHAHLQVAAAPQSLCALRAVDQSVLLMKPEAELSVSSVYNLLTVKDLTNFP 627 Query: 529 HNLMKGNEASPNCSETALIHIAGILARIASVEEGLILLLYGANM----NSSEESPTGAHI 584 N+ + E +C IH I ++S E + L G + NS P + Sbjct: 628 DNVDQQEEEQGHCPRPFFIHNGAIYVPLSSNEADIYSFLKGMGLKVFTNSKIRKPKSCSV 687 Query: 585 IAQFS 589 I S Sbjct: 688 IPSVS 692 >gi|55770834 centromere protein F [Homo sapiens] Length = 3114 Score = 31.6 bits (70), Expect = 5.0 Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 19/95 (20%) Query: 71 IEEEMEKCTSDRNQ--GE-------ECGYDTVVQQVTKRTQESKEYK-EMMHYL------ 114 +EEE+ TS+RNQ GE D + +++ ++TQE + ++ E +H + Sbjct: 1949 LEEELSVVTSERNQLRGELDTMSKKTTALDQLSEKMKEKTQELESHQSECLHCIQVAEAE 2008 Query: 115 ---KNIMIAVVESMINKFEEDETRNQERQKKIQKE 146 K ++ + S +++ +D+T QE+ + ++K+ Sbjct: 2009 VKEKTELLQTLSSDVSELLKDKTHLQEKLQSLEKD 2043 >gi|239750932 PREDICTED: hypothetical protein [Homo sapiens] Length = 241 Score = 31.2 bits (69), Expect = 6.5 Identities = 22/117 (18%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 1085 FQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELPL-VF 1143 + ++H ++ F++ +HI Y+ + + IH ++ C Y M + + V+ Sbjct: 58 YVYIHVYTHTYVYIFIYTC-IHICVYI---YIHTYIH-IHMCIYLYTHMYTHVYIHVYVY 112 Query: 1144 SAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200 + + + ++IC+ T + + +I YI C+++ +++CI V+ H+ Sbjct: 113 TYICIYTYMYTRICIHICTYLYTHMYVYIYTYVYIYICMYIYTYVYIHMCIYVYTHI 169 >gi|223941912 coiled-coil domain containing 135 [Homo sapiens] Length = 874 Score = 31.2 bits (69), Expect = 6.5 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Query: 10 AMLQAMLRRL-FQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLG 68 A + LRR S KI P + C + +E T + + YE + +L++ + Sbjct: 629 ASKREFLRRTEVDSKGNKIIMTPDM-CISFEVEPMEHTKKLLYQYEAMMHLKREEKLSRH 687 Query: 69 SMIEEEMEKCTSDRNQGEECGYDTVVQQV--TKRTQESKEYKEMM 111 + E E+E + + EE T+ + TKR ++SKEY+E M Sbjct: 688 QVWESELEVLEILKLREEEEAAHTLTISIYDTKRNEKSKEYREAM 732 >gi|151101140 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 31.2 bits (69), Expect = 6.5 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%) Query: 37 EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96 E +LLH + + H + + ++GS +EE + ++ +E ++ +Q Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325 Query: 97 VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141 +T ++ ++ E + L + M K++E +ET+NQE ++ Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385 Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182 K Q E + ++CS + + + Q +L+++ D L+ Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426 >gi|151105223 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 31.2 bits (69), Expect = 6.5 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%) Query: 37 EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96 E +LLH + + H + + ++GS +EE + ++ +E ++ +Q Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325 Query: 97 VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141 +T ++ ++ E + L + M K++E +ET+NQE ++ Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385 Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182 K Q E + ++CS + + + Q +L+++ D L+ Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426 >gi|151105229 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 31.2 bits (69), Expect = 6.5 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%) Query: 37 EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96 E +LLH + + H + + ++GS +EE + ++ +E ++ +Q Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325 Query: 97 VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141 +T ++ ++ E + L + M K++E +ET+NQE ++ Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385 Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182 K Q E + ++CS + + + Q +L+++ D L+ Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426 >gi|109637791 transcription factor-like nuclear regulator [Homo sapiens] Length = 2624 Score = 31.2 bits (69), Expect = 6.5 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%) Query: 111 MHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC 170 M +L M+ SMI + R + + K ++EK++ +R D + + F Sbjct: 310 MFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFD--FDFF 367 Query: 171 QGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFS 230 LQ +L + + + K V+ +L+ S P N + CE + +DPD S Sbjct: 368 AHLLQKVLAEEEKRKQKSVKNHSLKEKKSTKPRK--NVKVKKVACEGVN---NDPDESMS 422 Query: 231 DRI 233 RI Sbjct: 423 SRI 425 >gi|27883882 P18SRP protein [Homo sapiens] Length = 155 Score = 31.2 bits (69), Expect = 6.5 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 5/79 (6%) Query: 91 DTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHS 150 D V+ + +++S E E ++ L+ A+ E IN+ EE + + + K++K++ S Sbjct: 39 DIVLDVSSTSSEDSDEENEELNKLQ----ALQEKRINEEEEKKKEKSKEKIKLKKKRKRS 94 Query: 151 YRTDNCSDSDSSLNQSYKF 169 Y + + ++ D+S + K+ Sbjct: 95 Y-SSSSTEEDTSKQKKQKY 112 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.135 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,482,295 Number of Sequences: 37866 Number of extensions: 2076835 Number of successful extensions: 5877 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 5835 Number of HSP's gapped (non-prelim): 61 length of query: 1257 length of database: 18,247,518 effective HSP length: 114 effective length of query: 1143 effective length of database: 13,930,794 effective search space: 15922897542 effective search space used: 15922897542 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.