| Name: CCDC135 | Sequence: fasta or formatted (874aa) | NCBI GI: 223941912 | |
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Description: coiled-coil domain containing 135
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.5 39 2 C cysteine 2.2 19 2 D aspartate 5.4 47 2 E glutamate 12.7 111 5 F phenylalanine 3.4 30 2 G glycine 2.5 22 1 H histidine 2.7 24 1 I isoleucine 4.2 37 2 K lysine 8.4 73 2 L leucine 10.8 94 2 M methionine 3.0 26 2 N asparagine 3.1 27 1 P proline 5.4 47 2 Q glutamine 4.5 39 2 R arginine 6.4 56 2 S serine 5.4 47 2 T threonine 5.4 47 2 V valine 4.7 41 1 W tryptophan 1.6 14 1 Y tyrosine 3.9 34 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 coiled-coil domain containing 135 TCERG1 0.013 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.013 transcription elongation regulator 1 isoform 1 [Homo... GOLGB1 0.011 golgi autoantigen, golgin subfamily b, macrogolgin ... TCHP 0.011 trichoplein TCHP 0.011 trichoplein LOC647042 0.010 PREDICTED: hypothetical protein isoform 1 CCDC30 0.009 coiled-coil domain containing 30 LOC727832 0.008 golgi autoantigen, golgin subfamily a-like LOC100133220 0.008 PREDICTED: hypothetical protein UPF2 0.008 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.008 UPF2 regulator of nonsense transcripts homolog [Homo... LOC645202 0.008 PREDICTED: hypothetical protein LOC645202 LOC440243 0.008 PREDICTED: Putative golgin subfamily A member 6-lik... MYO10 0.008 myosin X EIF5B 0.008 eukaryotic translation initiation factor 5B SMC3 0.008 structural maintenance of chromosomes 3 MINK1 0.008 misshapen/NIK-related kinase isoform 4 MINK1 0.008 misshapen/NIK-related kinase isoform 2 MINK1 0.008 misshapen/NIK-related kinase isoform 3 MINK1 0.008 misshapen/NIK-related kinase isoform 1 CENPE 0.008 centromere protein E CHAF1A 0.008 chromatin assembly factor 1, subunit A (p150) GCC2 0.007 GRIP and coiled-coil domain-containing 2 LOC283685 0.007 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.007 PREDICTED: golgi autoantigen, golgin subfamily a-li... AKAP9 0.007 A-kinase anchor protein 9 isoform 2 AKAP9 0.007 A-kinase anchor protein 9 isoform 3 PPFIA3 0.007 PTPRF interacting protein alpha 3 RAB11FIP4 0.007 RAB11 family interacting protein 4 (class II)Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
