LOC653203 18902

Name: LOC653203	Sequence: fasta or formatted (1513aa)		NCBI GI: 239746652
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 24.2 366 2 C cysteine 0.3 4 1 D aspartate 8.1 123 2 E glutamate 10.0 151 2 F phenylalanine 0.2 3 1 G glycine 8.9 135 1 H histidine 4.9 74 2 I isoleucine 5.8 87 1 K lysine 2.4 37 3 L leucine 1.3 20 2 M methionine 0.5 7 1 N asparagine 7.5 114 1 P proline 1.7 25 1 Q glutamine 5.8 87 1 R arginine 1.7 26 2 S serine 1.7 25 1 T threonine 3.1 47 2 V valine 11.1 168 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC727962 0.677 PREDICTED: similar to collagen, type I, alpha 2 [Ho... LOC100133794 0.226 PREDICTED: hypothetical protein, partial LOC729444 0.152 PREDICTED: hypothetical protein LOC729461 0.151 PREDICTED: hypothetical protein LOC727962 0.145 PREDICTED: hypothetical protein COL2A1 0.031 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.031 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.027 alpha 1 type I collagen preproprotein COL1A2 0.024 alpha 2 type I collagen COL11A2 0.023 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL7A1 0.020 alpha 1 type VII collagen precursor COL11A1 0.020 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.020 alpha 1 type V collagen preproprotein COL24A1 0.019 collagen, type XXIV, alpha 1 COL3A1 0.019 collagen type III alpha 1 preproprotein COL5A2 0.019 alpha 2 type V collagen preproprotein COL5A3 0.018 collagen, type V, alpha 3 preproprotein COL27A1 0.014 collagen, type XXVII, alpha 1 COL22A1 0.013 collagen, type XXII, alpha 1 MARCO 0.012 macrophage receptor with collagenous structure COL4A1 0.011 alpha 1 type IV collagen preproprotein COL9A2 0.010 alpha 2 type IX collagen LOC100293055 0.010 PREDICTED: similar to COL22A1 protein COL21A1 0.009 collagen, type XXI, alpha 1 precursor RP1L1 0.008 retinitis pigmentosa 1-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.