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Search of human proteins with 239746493
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo
sapiens]
(529 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo ... 1071 0.0
gi|239752008 PREDICTED: hypothetical protein XP_002348065 [Homo ... 568 e-162
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 49 1e-05
gi|50083281 KIAA1853 protein [Homo sapiens] 43 6e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 8e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 8e-04
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 43 8e-04
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 42 0.002
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 42 0.002
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 42 0.002
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 41 0.002
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 41 0.002
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 41 0.002
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|150170670 piccolo isoform 2 [Homo sapiens] 40 0.004
gi|150378539 piccolo isoform 1 [Homo sapiens] 40 0.004
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 40 0.005
gi|38787970 tensin like C1 domain containing phosphatase isoform... 40 0.005
gi|38787957 tensin like C1 domain containing phosphatase isoform... 40 0.005
gi|38787941 tensin like C1 domain containing phosphatase isoform... 40 0.005
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.005
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.005
gi|13994190 frizzled 8 [Homo sapiens] 40 0.007
gi|150170699 kinesin family member 26A [Homo sapiens] 40 0.007
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 39 0.009
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 39 0.009
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 39 0.009
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 39 0.009
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 39 0.009
>gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo
sapiens]
Length = 529
Score = 1071 bits (2770), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MGGPSVGWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAGFQDRDP 60
MGGPSVGWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAGFQDRDP
Sbjct: 1 MGGPSVGWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAGFQDRDP 60
Query: 61 PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPEPPP 120
PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPEPPP
Sbjct: 61 PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPEPPP 120
Query: 121 QPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPGFC 180
QPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPGFC
Sbjct: 121 QPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPGFC 180
Query: 181 GARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELEER 240
GARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELEER
Sbjct: 181 GARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELEER 240
Query: 241 AWRATELSGDRDRDLLRDFSYSSLDLLRECEWEPRSDLGLDLLFDLDFLPFDRERDRPLL 300
AWRATELSGDRDRDLLRDFSYSSLDLLRECEWEPRSDLGLDLLFDLDFLPFDRERDRPLL
Sbjct: 241 AWRATELSGDRDRDLLRDFSYSSLDLLRECEWEPRSDLGLDLLFDLDFLPFDRERDRPLL 300
Query: 301 RDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLIFNKPNISAIYFCAIQFVQSTLH 360
RDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLIFNKPNISAIYFCAIQFVQSTLH
Sbjct: 301 RDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLIFNKPNISAIYFCAIQFVQSTLH 360
Query: 361 VRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGNSHLVQINQFCLTLGILTITLRL 420
VRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGNSHLVQINQFCLTLGILTITLRL
Sbjct: 361 VRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGNSHLVQINQFCLTLGILTITLRL 420
Query: 421 MAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVA 480
MAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVA
Sbjct: 421 MAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVA 480
Query: 481 VAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVLELHEAARLTHF 529
VAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVLELHEAARLTHF
Sbjct: 481 VAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVLELHEAARLTHF 529
>gi|239752008 PREDICTED: hypothetical protein XP_002348065 [Homo
sapiens]
Length = 355
Score = 568 bits (1465), Expect = e-162
Identities = 290/311 (93%), Positives = 292/311 (93%), Gaps = 13/311 (4%)
Query: 230 GGAGTAELEERAWRATELS-----------GDRDRDLLRDFSYSSLDLLRECEWEPRSDL 278
GG G+ ELE R W +L GDRDRDLLRDFSYSSLDLLRECEWEPRSDL
Sbjct: 47 GGTGSGELE-RDW-LLDLDFDFISPFPFSLGDRDRDLLRDFSYSSLDLLRECEWEPRSDL 104
Query: 279 GLDLLFDLDFLPFDRERDRPLLRDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLI 338
GLDLLFDLDFLPFDRERDRPLLRDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLI
Sbjct: 105 GLDLLFDLDFLPFDRERDRPLLRDLELDKERPIFSILMSFNKLPGSASRVRSPMACAWLI 164
Query: 339 FNKPNISAIYFCAIQFVQSTLHVRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGN 398
FNKPNISAIYFCAIQFVQSTLHVRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGN
Sbjct: 165 FNKPNISAIYFCAIQFVQSTLHVRVGAKLNYTLICSFLVGIRIGYFTCLSHKILKDKIGN 224
Query: 399 SHLVQINQFCLTLGILTITLRLMAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPT 458
SHLVQINQFCLTLGILTITLRLMAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPT
Sbjct: 225 SHLVQINQFCLTLGILTITLRLMAKGCCRHGFRQRGSGTPKSNDPRPSRLPGLGGPTPPT 284
Query: 459 PAPRVPKGAERAGVGLTAASVAVAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVL 518
PAPRVPKGAERAGVGLTAASVAVAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVL
Sbjct: 285 PAPRVPKGAERAGVGLTAASVAVAVAIATRAPGVLYDHALAAELLAVQLVNGVVGVAGVL 344
Query: 519 ELHEAARLTHF 529
ELHEAARLTHF
Sbjct: 345 ELHEAARLTHF 355
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 48.9 bits (115), Expect = 1e-05
Identities = 89/333 (26%), Positives = 124/333 (37%), Gaps = 60/333 (18%)
Query: 4 PSVGWGVEPSTATQKTTHSKAERY-KLGASAPPLAAAASRTREGTEAALSAG------FQ 56
PS P+ A T K+ R K A A+++S T+ A S +
Sbjct: 499 PSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSR 558
Query: 57 DRDPPPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLE-SRTRLAPCALRPDRFPRRF 115
DR P + R+R RS R RR +T + R G SR+R R RR
Sbjct: 559 DRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSR------EKRRRRRRS 612
Query: 116 PEPPPQPAPPAGGAR-----KERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHL 170
PPP + + R K RD G + +R RS +R GD ++ P
Sbjct: 613 ASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKR-SRSRGEKRSGDGSEKAPAPAP---- 667
Query: 171 PGPGAGPGFCGAR------ALLPAFEALVVRASCPLNLGQVCRTGVAGR-DFSCPRTPAS 223
P +G CG R A+ P+ + L +L + RT GR D S PR P
Sbjct: 668 --PPSGSTSCGDRDSRRRGAVPPSIQDLTDH-----DLFAIKRTITVGRLDKSDPRGP-- 718
Query: 224 QLAERSGGAGTAELEERAWRATELSGDR------DRDLLRDFSYSSLDLLRECEWEPRSD 277
S ++ E + + LSG+ +D R + SS RE ++
Sbjct: 719 -----SPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKA- 772
Query: 278 LGLDLLFDLDFLPFDRERDRPLLRDLELDKERP 310
LD DR+RDR RD K RP
Sbjct: 773 --------LDGGDRDRDRDRDRDRDRSSKKARP 797
Score = 30.0 bits (66), Expect = 5.5
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 94 GLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARR 153
GL+ R ++ R +R+ +R P P P PAP A R S R RSG A+
Sbjct: 479 GLDLRRKIL--TQRRERYRQRSPSPAPAPAPAAAAGPPTRKK-----SRRERKRSGEAKE 531
Query: 154 PGDAR--TQSAGP 164
+ TQ A P
Sbjct: 532 AASSSSGTQPAPP 544
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 43.1 bits (100), Expect = 6e-04
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 13 STATQKTTHSKAERY--KLGASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQ 70
ST+++K ++S++ Y K G +PP + +SR+R + + ++RDP + +D ++
Sbjct: 421 STSSEKRSYSRSPSYSSKSGKRSPP--SRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQR 478
Query: 71 RRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRF--PRRFPEPPPQPAPPAGG 128
R R RR +P + R R +P L R R+ P P +P+P + G
Sbjct: 479 ERE-----RARRRRRSYSP-----MRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSG 528
Query: 129 ARKERDAGAADLSPRRPGRS-------GVARRPGDARTQSAGPERRAHLPGPGA 175
+ + + S R RS +RR RT S+ R P PG+
Sbjct: 529 SLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRS---PSPGS 579
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.7 bits (99), Expect = 8e-04
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 120 PQPAPPAGGARKERDAGAADLSPR-RPGRSGVARRPGDARTQSAGPERRAHLPGPGAG-- 176
P+ AP AG R AG + +P RP SG R A+ S GP PG +G
Sbjct: 71 PESAPRAGPTRS---AGTSSRNPASRPPASGRGERAPPAKNTSPGP---VSSPGRASGTT 124
Query: 177 -PGFCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFS--CPRTPASQLAERSGGAG 233
PG G + L + E V R + + A RD S P TP+ +A RS AG
Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAG 184
Query: 234 T 234
T
Sbjct: 185 T 185
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.7 bits (99), Expect = 8e-04
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 120 PQPAPPAGGARKERDAGAADLSPR-RPGRSGVARRPGDARTQSAGPERRAHLPGPGAG-- 176
P+ AP AG R AG + +P RP SG R A+ S GP PG +G
Sbjct: 71 PESAPRAGPTRS---AGTSSRNPASRPPASGRGERAPPAKNTSPGP---VSSPGRASGTT 124
Query: 177 -PGFCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFS--CPRTPASQLAERSGGAG 233
PG G + L + E V R + + A RD S P TP+ +A RS AG
Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAG 184
Query: 234 T 234
T
Sbjct: 185 T 185
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 42.7 bits (99), Expect = 8e-04
Identities = 46/160 (28%), Positives = 56/160 (35%), Gaps = 30/160 (18%)
Query: 7 GWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRD 66
G G P A +K K E GA+ AS RE E L Q+R+P P
Sbjct: 22 GGGASPEEAVEKA--GKMEEAAAGATK------ASSRREAEEMKLEP-LQEREPAPEENL 72
Query: 67 WYRQRRAGRSLIRQF-------------RRTPEATPQGRLGLESRTRLAPCALRPDRFPR 113
+ ++ RR P PQ R +R+R P P P
Sbjct: 73 TWSSSGGDEKVLPSIPLRCHSSSSPVCPRRKPRPRPQPR----ARSRSQPGLSAPPPPPA 128
Query: 114 RFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARR 153
R P PPP P PPA R R + RPG RR
Sbjct: 129 RPPPPPPPPPPPAPRPRAWRGSRRRS----RPGSRPQTRR 164
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 41.6 bits (96), Expect = 0.002
Identities = 48/163 (29%), Positives = 57/163 (34%), Gaps = 39/163 (23%)
Query: 108 PDRFPRRFPEPPPQPAPPA----------------GGARKERDAGAADLSPRR------- 144
PD P P PPP P PPA GG ++RD+G PR
Sbjct: 12 PDADPANEP-PPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
Query: 145 -PGRSGVARR------PGDA---RTQSAGPERRAHLPGPGAGPG-FCGARALLPAFEALV 193
PG G R PG R Q A P GPG GPG GA A +V
Sbjct: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
Query: 194 VRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAE 236
V + +G C +G S R A + GG+ E
Sbjct: 131 VGVGGAVGVGGCC----SGPGHSKRRRQAPGVGAVGGGSPERE 169
Score = 29.3 bits (64), Expect = 9.3
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 443 PRPSRL--PGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAI 485
PRP + P GGP P P GA AGVG V V A+
Sbjct: 93 PRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAV 137
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 41.6 bits (96), Expect = 0.002
Identities = 48/163 (29%), Positives = 57/163 (34%), Gaps = 39/163 (23%)
Query: 108 PDRFPRRFPEPPPQPAPPA----------------GGARKERDAGAADLSPRR------- 144
PD P P PPP P PPA GG ++RD+G PR
Sbjct: 12 PDADPANEP-PPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
Query: 145 -PGRSGVARR------PGDA---RTQSAGPERRAHLPGPGAGPG-FCGARALLPAFEALV 193
PG G R PG R Q A P GPG GPG GA A +V
Sbjct: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
Query: 194 VRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAE 236
V + +G C +G S R A + GG+ E
Sbjct: 131 VGVGGAVGVGGCC----SGPGHSKRRRQAPGVGAVGGGSPERE 169
Score = 29.3 bits (64), Expect = 9.3
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 443 PRPSRL--PGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAI 485
PRP + P GGP P P GA AGVG V V A+
Sbjct: 93 PRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAV 137
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 41.6 bits (96), Expect = 0.002
Identities = 48/163 (29%), Positives = 57/163 (34%), Gaps = 39/163 (23%)
Query: 108 PDRFPRRFPEPPPQPAPPA----------------GGARKERDAGAADLSPRR------- 144
PD P P PPP P PPA GG ++RD+G PR
Sbjct: 12 PDADPANEP-PPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
Query: 145 -PGRSGVARR------PGDA---RTQSAGPERRAHLPGPGAGPG-FCGARALLPAFEALV 193
PG G R PG R Q A P GPG GPG GA A +V
Sbjct: 71 LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
Query: 194 VRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAE 236
V + +G C +G S R A + GG+ E
Sbjct: 131 VGVGGAVGVGGCC----SGPGHSKRRRQAPGVGAVGGGSPERE 169
Score = 29.3 bits (64), Expect = 9.3
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 443 PRPSRL--PGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAI 485
PRP + P GGP P P GA AGVG V V A+
Sbjct: 93 PRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAV 137
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/146 (30%), Positives = 57/146 (39%), Gaps = 21/146 (14%)
Query: 58 RDPPPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPE 117
R P S+ R+RR G ++ + R P +GR GL L A +P R RR +
Sbjct: 51 RSPAQYSQTRLRRRRQGAVIVGRRRACPG---RGRGGLPGAAALGAGAQQPRR--RRLAQ 105
Query: 118 PPPQPAP-PAGGARKERDAGAADLSPRRPGRSGVAR----------RPGDARTQ-----S 161
PP AP GGA + R RRP R A RP ART+ +
Sbjct: 106 PPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLA 165
Query: 162 AGPERRAHLPGPGAGPGFCGARALLP 187
+ R P P AG G L P
Sbjct: 166 SARLPRGLPPAPAAGLWRAGCTRLRP 191
Score = 29.6 bits (65), Expect = 7.1
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 122 PAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAG 176
P P GG + D+ A+ SP P A P AR +S G R A P AG
Sbjct: 272 PGPIVGGRPENEDSLASQTSPPAP----PAPVPSTARARSPGARRGARELAPRAG 322
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/146 (30%), Positives = 57/146 (39%), Gaps = 21/146 (14%)
Query: 58 RDPPPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPE 117
R P S+ R+RR G ++ + R P +GR GL L A +P R RR +
Sbjct: 51 RSPAQYSQTRLRRRRQGAVIVGRRRACPG---RGRGGLPGAAALGAGAQQPRR--RRLAQ 105
Query: 118 PPPQPAP-PAGGARKERDAGAADLSPRRPGRSGVAR----------RPGDARTQ-----S 161
PP AP GGA + R RRP R A RP ART+ +
Sbjct: 106 PPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLA 165
Query: 162 AGPERRAHLPGPGAGPGFCGARALLP 187
+ R P P AG G L P
Sbjct: 166 SARLPRGLPPAPAAGLWRAGCTRLRP 191
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/146 (30%), Positives = 57/146 (39%), Gaps = 21/146 (14%)
Query: 58 RDPPPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPE 117
R P S+ R+RR G ++ + R P +GR GL L A +P R RR +
Sbjct: 51 RSPAQYSQTRLRRRRQGAVIVGRRRACPG---RGRGGLPGAAALGAGAQQPRR--RRLAQ 105
Query: 118 PPPQPAP-PAGGARKERDAGAADLSPRRPGRSGVAR----------RPGDARTQ-----S 161
PP AP GGA + R RRP R A RP ART+ +
Sbjct: 106 PPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLA 165
Query: 162 AGPERRAHLPGPGAGPGFCGARALLP 187
+ R P P AG G L P
Sbjct: 166 SARLPRGLPPAPAAGLWRAGCTRLRP 191
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/133 (30%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 61 PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCA-----LRPDRFPRRF 115
P S W + GR FR P A + S +R CA LR + R
Sbjct: 81 PEPSLTWAQ----GRGCRGHFRSLPAAASR------SGSRTLRCASSDRSLREQKQRRAG 130
Query: 116 PEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDAR--TQSAGPERRAHLPGP 173
P+P P PAPP G R L P P AR + + GP + A P
Sbjct: 131 PDPTPSPAPPPAGPR----PSPGSLGPSAPAAPRTARGAYELQGGASQDGPGQAAVGATP 186
Query: 174 GAGPGFCGARALL 186
GPG G ALL
Sbjct: 187 TTGPGTGGEGALL 199
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 40.8 bits (94), Expect = 0.003
Identities = 48/159 (30%), Positives = 54/159 (33%), Gaps = 25/159 (15%)
Query: 26 RYKLGASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYR--------QRRAGRSL 77
R GA A A A SR R AA +A P R W R Q R+
Sbjct: 83 RVLAGAPARTGALAGSRLR----AAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPH 138
Query: 78 IRQFRRTPEATP-QGRLGLESRTRLAPCALRPDRFPRRF--------PEPPPQPAPPAGG 128
R R PEATP + G R + P R FP R P P+P P G
Sbjct: 139 TRYPRAVPEATPLRPPPGTRPRAKSRP-GCRSSPFPARSRTPGEAGPPRGDPRPRAPRPG 197
Query: 129 ARKERDAGAAD---LSPRRPGRSGVARRPGDARTQSAGP 164
R + LSP PGR R G T P
Sbjct: 198 DHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP 236
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 26/180 (14%)
Query: 4 PSVGWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAG----FQDRD 59
P G ++ T T +T H+K + AS P A E + +L + Q
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKLPLQR-DASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 60 P--PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPE 117
P PPA + + + + G P P GL P ++P P +
Sbjct: 311 PGKPPAQQPGHEKSQPG----------PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 PPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGP 177
PP QP PA ++ G+ S +PG +A+ PG +T A PGP P
Sbjct: 361 PPAQPLGPAKPPAQQ--TGSEKPSSEQPGPKALAQPPGVGKTP-------AQQPGPAKPP 411
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/82 (28%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 430 FRQRGSGTPKSNDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAIATRA 489
FR P P P P PP P P +P L + VA + T
Sbjct: 2394 FRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTAT 2453
Query: 490 PGVLYDHALAAELLAVQLVNGV 511
P L+D E AV NG+
Sbjct: 2454 P--LFDAVTTLETTAVLRSNGL 2473
Score = 29.3 bits (64), Expect = 9.3
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 432 QRGSGTPKSNDPRPSRLPGLGGP------TPPTPAPRVP 464
Q G G P P PS+ P GP PP PA +P
Sbjct: 957 QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 26/180 (14%)
Query: 4 PSVGWGVEPSTATQKTTHSKAERYKLGASAPPLAAAASRTREGTEAALSAG----FQDRD 59
P G ++ T T +T H+K + AS P A E + +L + Q
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKLPLQR-DASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 60 P--PPASRDWYRQRRAGRSLIRQFRRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPE 117
P PPA + + + + G P P GL P ++P P +
Sbjct: 311 PGKPPAQQPGHEKSQPG----------PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 PPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGP 177
PP QP PA ++ G+ S +PG +A+ PG +T A PGP P
Sbjct: 361 PPAQPLGPAKPPAQQ--TGSEKPSSEQPGPKALAQPPGVGKTP-------AQQPGPAKPP 411
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/82 (28%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 430 FRQRGSGTPKSNDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAIATRA 489
FR P P P P PP P P +P L + VA + T
Sbjct: 2394 FRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTAT 2453
Query: 490 PGVLYDHALAAELLAVQLVNGV 511
P L+D E AV NG+
Sbjct: 2454 P--LFDAVTTLETTAVLRSNGL 2473
Score = 29.3 bits (64), Expect = 9.3
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 432 QRGSGTPKSNDPRPSRLPGLGGP------TPPTPAPRVP 464
Q G G P P PS+ P GP PP PA +P
Sbjct: 957 QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 112 PRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLP 171
P R P PQ P + A+ ER AD P PGR+G PG + G + LP
Sbjct: 1277 PGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPG-----APGLKGSPGLP 1331
Query: 172 GPGAGPGFCGAR 183
GP PG G R
Sbjct: 1332 GPRGDPGERGPR 1343
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/260 (22%), Positives = 82/260 (31%), Gaps = 49/260 (18%)
Query: 16 TQKTTHSKAERYKLGASAPPLAAAASR------TREGTEAALSAGFQDRDPPPASRDWYR 69
T+ T + +R G + PP++ A + + G E + PP + DW +
Sbjct: 805 TRSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQ 864
Query: 70 QRRAGRSLIRQFRRTPEATP---------QGRLGLESRTRLAPCALRPDRFPRRF--PEP 118
+R G R+P T QG G +P P + P PEP
Sbjct: 865 ERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPVPSQMPWLVASPEP 924
Query: 119 PPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPG 178
P PA D P PE+R HLPGPG PG
Sbjct: 925 PQSSPTPAFPLAASYDTNGLSQPPL--------------------PEKR-HLPGPGQQPG 963
Query: 179 FCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELE 238
G +AS P T + P+TP E +
Sbjct: 964 PWGPE-----------QASSPARGISHHVTFAPLLSDNVPQTPEPPTQESQSNVKFVQDT 1012
Query: 239 ERAWRATELSGDRDRDLLRD 258
+ W LS D+ LL+D
Sbjct: 1013 SKFWYKPHLSRDQAIALLKD 1032
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/260 (22%), Positives = 82/260 (31%), Gaps = 49/260 (18%)
Query: 16 TQKTTHSKAERYKLGASAPPLAAAASR------TREGTEAALSAGFQDRDPPPASRDWYR 69
T+ T + +R G + PP++ A + + G E + PP + DW +
Sbjct: 929 TRSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQ 988
Query: 70 QRRAGRSLIRQFRRTPEATP---------QGRLGLESRTRLAPCALRPDRFPRRF--PEP 118
+R G R+P T QG G +P P + P PEP
Sbjct: 989 ERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPVPSQMPWLVASPEP 1048
Query: 119 PPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPG 178
P PA D P PE+R HLPGPG PG
Sbjct: 1049 PQSSPTPAFPLAASYDTNGLSQPPL--------------------PEKR-HLPGPGQQPG 1087
Query: 179 FCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELE 238
G +AS P T + P+TP E +
Sbjct: 1088 PWGPE-----------QASSPARGISHHVTFAPLLSDNVPQTPEPPTQESQSNVKFVQDT 1136
Query: 239 ERAWRATELSGDRDRDLLRD 258
+ W LS D+ LL+D
Sbjct: 1137 SKFWYKPHLSRDQAIALLKD 1156
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/260 (22%), Positives = 82/260 (31%), Gaps = 49/260 (18%)
Query: 16 TQKTTHSKAERYKLGASAPPLAAAASR------TREGTEAALSAGFQDRDPPPASRDWYR 69
T+ T + +R G + PP++ A + + G E + PP + DW +
Sbjct: 939 TRSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQ 998
Query: 70 QRRAGRSLIRQFRRTPEATP---------QGRLGLESRTRLAPCALRPDRFPRRF--PEP 118
+R G R+P T QG G +P P + P PEP
Sbjct: 999 ERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPVPSQMPWLVASPEP 1058
Query: 119 PPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGPGAGPG 178
P PA D P PE+R HLPGPG PG
Sbjct: 1059 PQSSPTPAFPLAASYDTNGLSQPPL--------------------PEKR-HLPGPGQQPG 1097
Query: 179 FCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELE 238
G +AS P T + P+TP E +
Sbjct: 1098 PWGPE-----------QASSPARGISHHVTFAPLLSDNVPQTPEPPTQESQSNVKFVQDT 1146
Query: 239 ERAWRATELSGDRDRDLLRD 258
+ W LS D+ LL+D
Sbjct: 1147 SKFWYKPHLSRDQAIALLKD 1166
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.0 bits (92), Expect = 0.005
Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 33 APPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQRRAGRSLIRQFRRTPEATPQGR 92
AP A +R G + ALS D DPP + R G + R F PQG
Sbjct: 1202 APEGEPGAPDSRAGGDTALSG---DGDPP-------KPERKGPEMPRLFLDL--GPPQGN 1249
Query: 93 LGLESRTRLAPCALR-PDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVA 151
+ + RL+ +L P FP P P+ PP GA DAGAA G G A
Sbjct: 1250 -SEQIKARLSRLSLALPPLTLTPFPGPGPR-RPPWEGA----DAGAAGGEAGGAGAPGPA 1303
Query: 152 RRPGDARTQSAGPERRAHLPGPGAGP 177
G+ + + A PG AGP
Sbjct: 1304 EEDGEDEDEDEEEDEEAAAPGAAAGP 1329
Score = 34.7 bits (78), Expect = 0.22
Identities = 38/150 (25%), Positives = 52/150 (34%), Gaps = 28/150 (18%)
Query: 116 PEPPPQPAP-PAGGARKERD------------AGAADLSPRRPGRSGVARRPGDARTQSA 162
P PPP P P P G R++ + D++ G G R R
Sbjct: 862 PRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNLLGEKGATARETGPRKAGR 921
Query: 163 GPERRAHLPGPGAGPGFCGARALLPAFEALVVRASCPLNLGQVCRTGVAGRDFSCPRTPA 222
GP R +PG P G P+ S P+N GV + R P
Sbjct: 922 GPGNREKVPGLNRDPTVLGNGKQAPSL-------SLPVN-------GVTVLENGDQRAPG 967
Query: 223 -SQLAERSGGAGTAELEERAWRATELSGDR 251
+ A +G G+ E EE+ EL+ R
Sbjct: 968 IEEKAAENGALGSPEREEKVLENGELTPPR 997
Score = 29.6 bits (65), Expect = 7.1
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 108 PDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGP-ER 166
P R P P PPP P D +A SP G S +PGD+ ++ P
Sbjct: 774 PGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASP-GSGLSSPGPKPGDSGYETETPFSP 832
Query: 167 RAHLPGPGA 175
PG GA
Sbjct: 833 EGAFPGGGA 841
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 84 TPEATPQGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPR 143
TP A P+ G + A A P P P PPP P A AR R A AA +P
Sbjct: 107 TPPAPPRAPRGAPA----AAAAAAPPPTPA--PPPPPAPVAAAAPARAPRAAAAAATAPP 160
Query: 144 RPGRSGVARRPGDARTQSAGPERRAHLP--GPGAGP 177
PG + R A +A P A P P AGP
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGP 196
Score = 33.5 bits (75), Expect = 0.49
Identities = 39/147 (26%), Positives = 48/147 (32%), Gaps = 12/147 (8%)
Query: 34 PPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQRRAGRSLIRQFRRTPEAT--PQG 91
PP AA+ AA +A P PA QR A + P A P G
Sbjct: 136 PPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Query: 92 RL-----GLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRR-- 144
+ +R P +P P++ PPPQP PP G A +S R
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255
Query: 145 ---PGRSGVARRPGDARTQSAGPERRA 168
G G R R Q E A
Sbjct: 256 RYLGGSGGAGGRLTRGRVQGLLEEEAA 282
Score = 30.8 bits (68), Expect = 3.2
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 432 QRGSGTPKS-NDPRPSRLPGLGGPTPPTPAPRVPKGAERAGVGLTAASVAVAVAIATRAP 490
+RG+ P PR + PPTPAP P A A A A A A +P
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 491 G 491
G
Sbjct: 163 G 163
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 39.7 bits (91), Expect = 0.007
Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 17/142 (11%)
Query: 58 RDPPPASRDWYRQRRAGRS-LIRQFR----------RTPEATPQGRLGLE-SRTRLAPCA 105
+ P P R + +AG + L+RQ+ R PE L ++ +RT L A
Sbjct: 101 KKPLPPCRSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAA 160
Query: 106 LRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPE 165
P PRR P PPP PP+G R GA R GR G + G
Sbjct: 161 PSP---PRRLPPPPPGEQPPSGSGH-GRPPGARP-PHRGGGRGGGGGDAAAPPARGGGGG 215
Query: 166 RRAHLPGPGAGPGFCGARALLP 187
+A PG GA P G + P
Sbjct: 216 GKARPPGGGAAPCEPGCQCRAP 237
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 39.7 bits (91), Expect = 0.007
Identities = 55/194 (28%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 4 PSVGWGVEPSTATQK---TTHSKAERYKLGASAPPLAAAASRTREGTEAALSAGFQDRDP 60
P G+ PS A T S E+ ASAPP A +R G A L + +P
Sbjct: 1348 PKAGFLPRPSGAAPPAPPTRKSSLEQRSSPASAPPHAVNPARV--GAAAVLRG---EEEP 1402
Query: 61 PPASRDWYRQRRAGRSLIRQFRRTPEATP-QGRLGLESRTRLAPCALR----PDRFPRRF 115
P+SR + RA SL + + A G LE LA + + P R PR
Sbjct: 1403 RPSSRADHSVPRATSSLKARASKVEAAHRLAGHASLERYEGLAHSSSKGREAPGRPPRAV 1462
Query: 116 PEPPPQPAPPAGGARKERDAGAADL--SPRRPGRSGVARRPGDARTQSAGPERR---AHL 170
P+ P+ P G +GAA +P+ P G R +++ GP + A +
Sbjct: 1463 PKLGVPPSSPTHGPAPACRSGAAKAVGAPKPPVGGGKGRGLVAGGSRALGPSVKLSTASV 1522
Query: 171 PGPGAGPGFCGARA 184
G G G RA
Sbjct: 1523 TGRSPGGPVAGPRA 1536
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 39.3 bits (90), Expect = 0.009
Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 112 PRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLP 171
P+ FP P QP PP G AGA P PG G G T GP R LP
Sbjct: 360 PKGFPGLPGQPGPP--GLPVPGQAGA----PGFPGERGEKGDRGFPGTSLPGPSGRDGLP 413
Query: 172 GPGAGPG 178
GP PG
Sbjct: 414 GPPGSPG 420
Score = 33.1 bits (74), Expect = 0.64
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 89 PQGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADL-SPRRPGR 147
PQG+ GL A + DR P+ P P P P D D +P PG
Sbjct: 1217 PQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGA 1276
Query: 148 SGVARRPGDARTQSAGPERRAHLPGPGAGPGFCGAR 183
GV GD Q +PG G PG G++
Sbjct: 1277 PGVPGPKGDPGFQG--------MPGIGGSPGITGSK 1304
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 39.3 bits (90), Expect = 0.009
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 28/182 (15%)
Query: 30 GASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQRRAGRSLIRQFRRTPEATP 89
G +PP +A T AA +A R +R R L+R RT P
Sbjct: 77 GDLSPPRPGSARTQLVATSAAQAAAAG------------RAQRVRRGLLRW--RTTALGP 122
Query: 90 QGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAA--DLSPRRPGR 147
+R RL R RR P P P+ P G +E GAA D +P R G
Sbjct: 123 -------ARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 148 SGVARRPGDARTQSAGPERRAHLPGPGAGPGFCGARALLPAFEALVVRASCPL-NLGQVC 206
+A R R + P LP P A PG A A A R + P + G+V
Sbjct: 176 EDLAARASTRRPRGFRP----GLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVG 231
Query: 207 RT 208
RT
Sbjct: 232 RT 233
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 0.009
Identities = 48/184 (26%), Positives = 70/184 (38%), Gaps = 16/184 (8%)
Query: 82 RRTPEATPQGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGAR----KERDAGA 137
RR+ +AT + G R RL R + + R P P G+R + ++ G
Sbjct: 82 RRSMQATV-AKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGG 140
Query: 138 ADLSPRRPGRSGVARRPGDAR----TQSAGPERRAHLPGPGAGPGFCGARALLPAFEALV 193
D PRR G+ R G + ++AG + H P G RA + L
Sbjct: 141 GDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKH-----RKPRRRGERAAAAGGKKLQ 195
Query: 194 VRASCPLNLGQVCRTGVAGRDFSCPRTPASQLAERSGGAGTAELEERAWRATELSGDRDR 253
A+ G +T AG PR Q A +S G G +LE + T + D+
Sbjct: 196 KAAAAKSRGGGGKKTAAAGG--KKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDK 253
Query: 254 DLLR 257
LR
Sbjct: 254 KPLR 257
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 39.3 bits (90), Expect = 0.009
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 28/182 (15%)
Query: 30 GASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQRRAGRSLIRQFRRTPEATP 89
G +PP +A T AA +A R +R R L+R RT P
Sbjct: 77 GDLSPPRPGSARTQLVATSAAQAAAAG------------RAQRVRRGLLRW--RTTALGP 122
Query: 90 QGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAA--DLSPRRPGR 147
+R RL R RR P P P+ P G +E GAA D +P R G
Sbjct: 123 -------ARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 148 SGVARRPGDARTQSAGPERRAHLPGPGAGPGFCGARALLPAFEALVVRASCPL-NLGQVC 206
+A R R + P LP P A PG A A A R + P + G+V
Sbjct: 176 EDLAARASTRRPRGFRP----GLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVG 231
Query: 207 RT 208
RT
Sbjct: 232 RT 233
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 39.3 bits (90), Expect = 0.009
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 28/182 (15%)
Query: 30 GASAPPLAAAASRTREGTEAALSAGFQDRDPPPASRDWYRQRRAGRSLIRQFRRTPEATP 89
G +PP +A T AA +A R +R R L+R RT P
Sbjct: 77 GDLSPPRPGSARTQLVATSAAQAAAAG------------RAQRVRRGLLRW--RTTALGP 122
Query: 90 QGRLGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAA--DLSPRRPGR 147
+R RL R RR P P P+ P G +E GAA D +P R G
Sbjct: 123 -------ARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 148 SGVARRPGDARTQSAGPERRAHLPGPGAGPGFCGARALLPAFEALVVRASCPL-NLGQVC 206
+A R R + P LP P A PG A A A R + P + G+V
Sbjct: 176 EDLAARASTRRPRGFRP----GLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVG 231
Query: 207 RT 208
RT
Sbjct: 232 RT 233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,659,549
Number of Sequences: 37866
Number of extensions: 1447828
Number of successful extensions: 14070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 755
Number of HSP's that attempted gapping in prelim test: 11556
Number of HSP's gapped (non-prelim): 3286
length of query: 529
length of database: 18,247,518
effective HSP length: 107
effective length of query: 422
effective length of database: 14,195,856
effective search space: 5990651232
effective search space used: 5990651232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.