Search of human proteins with 239746407

Search of human proteins with 239746407

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746407 PREDICTED: hypothetical protein XP_002343705 [Homo
sapiens]
         (188 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757369 PREDICTED: hypothetical protein [Homo sapiens]           374   e-104
gi|239751917 PREDICTED: hypothetical protein [Homo sapiens]           374   e-104
gi|239746407 PREDICTED: hypothetical protein XP_002343705 [Homo ...   374   e-104
gi|85068578 intercellular adhesion molecule 4 isoform 3 precurso...    35   0.029
gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor...    35   0.029
gi|12545402 intercellular adhesion molecule 4 isoform 2 precurso...    35   0.029
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]            35   0.050
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]            35   0.050
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]            35   0.050
gi|145699105 connexin40.1 [Homo sapiens]                               33   0.14 
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]            33   0.19 
gi|169790811 SHC (Src homology 2 domain containing) transforming...    31   0.55 
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    30   0.94 
gi|118918405 SAC3 domain containing 1 [Homo sapiens]                   30   0.94 
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.2  
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ...    30   1.2  
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.2  
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ...    30   1.2  
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.2  
gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens]        30   1.2  
gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens]        30   1.2  
gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens]        30   1.2  
gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]                    30   1.6  
gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]                     30   1.6  
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]            29   2.1  
gi|123701326 zinc finger protein 831 [Homo sapiens]                    29   2.1  
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]      29   2.1  
gi|239748707 PREDICTED: hypothetical protein XP_002346778 [Homo ...    29   2.7  
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ...    29   2.7  
gi|239742733 PREDICTED: hypothetical protein XP_002342624 [Homo ...    29   2.7  

>gi|239757369 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score =  374 bits (959), Expect = e-104
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60
           MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI
Sbjct: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60

Query: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120
           LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI
Sbjct: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120

Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180
           GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS
Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180

Query: 181 VRLGKLIP 188
           VRLGKLIP
Sbjct: 181 VRLGKLIP 188


>gi|239751917 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score =  374 bits (959), Expect = e-104
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60
           MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI
Sbjct: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60

Query: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120
           LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI
Sbjct: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120

Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180
           GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS
Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180

Query: 181 VRLGKLIP 188
           VRLGKLIP
Sbjct: 181 VRLGKLIP 188


>gi|239746407 PREDICTED: hypothetical protein XP_002343705 [Homo
           sapiens]
          Length = 188

 Score =  374 bits (959), Expect = e-104
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60
           MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI
Sbjct: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60

Query: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120
           LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI
Sbjct: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120

Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180
           GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS
Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180

Query: 181 VRLGKLIP 188
           VRLGKLIP
Sbjct: 181 VRLGKLIP 188


>gi|85068578 intercellular adhesion molecule 4 isoform 3 precursor
           [Homo sapiens]
          Length = 272

 Score = 35.4 bits (80), Expect = 0.029
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165
           P  L   L+ A  G+G  + R   R +  Q P+G  L   APS    P  FW + +    
Sbjct: 6   PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53

Query: 166 SFHQPEFLSVQPGGSVRL 183
               PEF++VQPG SV+L
Sbjct: 54  ----PEFVAVQPGKSVQL 67


>gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor
           [Homo sapiens]
          Length = 271

 Score = 35.4 bits (80), Expect = 0.029
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165
           P  L   L+ A  G+G  + R   R +  Q P+G  L   APS    P  FW + +    
Sbjct: 6   PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53

Query: 166 SFHQPEFLSVQPGGSVRL 183
               PEF++VQPG SV+L
Sbjct: 54  ----PEFVAVQPGKSVQL 67


>gi|12545402 intercellular adhesion molecule 4 isoform 2 precursor
           [Homo sapiens]
          Length = 237

 Score = 35.4 bits (80), Expect = 0.029
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165
           P  L   L+ A  G+G  + R   R +  Q P+G  L   APS    P  FW + +    
Sbjct: 6   PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53

Query: 166 SFHQPEFLSVQPGGSVRL 183
               PEF++VQPG SV+L
Sbjct: 54  ----PEFVAVQPGKSVQL 67


>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.050
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61
           A+VLHQVR P E L ALA  + L A    LV  +     +  A  GAR  L A +  P+L
Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341



 Score = 30.0 bits (66), Expect = 1.2
 Identities = 21/53 (39%), Positives = 24/53 (45%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55
           A V+HQVR   E LPALAA +G       LV        +  A  GA   L A
Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278


>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.050
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61
           A+VLHQVR P E L ALA  + L A    LV  +     +  A  GAR  L A +  P+L
Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341



 Score = 30.0 bits (66), Expect = 1.2
 Identities = 21/53 (39%), Positives = 24/53 (45%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55
           A V+HQVR   E LPALAA +G       LV        +  A  GA   L A
Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278


>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.050
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61
           A+VLHQVR P E L ALA  + L A    LV  +     +  A  GAR  L A +  P+L
Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341



 Score = 30.0 bits (66), Expect = 1.2
 Identities = 21/53 (39%), Positives = 24/53 (45%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55
           A V+HQVR   E LPALAA +G       LV        +  A  GA   L A
Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278


>gi|145699105 connexin40.1 [Homo sapiens]
          Length = 370

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 71  RRAPVRGRLLDDGLPLRSGGRVGLRVLG----VLRVRGLPRLL----FLLLSGARRGIGK 122
           RR    G   ++G P   G R G    G      RV G  ++       + S A   +G+
Sbjct: 249 RRTDEEGGREEEGAPAPPGARAGGEGAGSPRRTSRVSGHTKIPDEDESEVTSSASEKLGR 308

Query: 123 GVPRGRLRRQLRQHPRGGG---LLAGAPSALLPPPA 155
             PRGR  R+  Q PRG G     + APS L  PP+
Sbjct: 309 Q-PRGRPHREAAQDPRGSGSEEQPSAAPSRLAAPPS 343


>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 192

 Score = 32.7 bits (73), Expect = 0.19
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 118 RGIGKGVPRGRLRRQLRQHPRGGGLLAG-APSALLPPPAFWNKA 160
           RG G+G  RG + +Q R  P     L G AP+   PPPA+W  A
Sbjct: 115 RGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWA 158


>gi|169790811 SHC (Src homology 2 domain containing) transforming
           protein 2 [Homo sapiens]
          Length = 582

 Score = 31.2 bits (69), Expect = 0.55
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 15  GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRPLGSQ----- 69
           G+PALAA + L A + R  +P  LP L  C  AG+R +         G     ++     
Sbjct: 71  GVPALAAAV-LGACEPRCAAPCPLPALSRCRGAGSRGSRGGRGAAGSGDAAAAAEWIRKG 129

Query: 70  -FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRV 102
            F   P  G L  D   L  G    +R +G + V
Sbjct: 130 SFIHKPAHGWLHPDARVLGPGVSYVVRYMGCIEV 163


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 30.4 bits (67), Expect = 0.94
 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 5/145 (3%)

Query: 1   MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60
           +A ++  +  + REG  A AA   LPAG    V     P  +P  +A  +   +A     
Sbjct: 565 VALLMRQEAGQLREGAVAAAAAERLPAGSPVAVLVAGEPSHRPEGLAAGQTG-KARRGGG 623

Query: 61  LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120
            G R L  + R     GRL   G  L  G R+G     VL+ + L     L    A   +
Sbjct: 624 GGRRGLRQRGRWLVGLGRL--GGCLLGLGRRIGPGARLVLQEQLLAAESLLAAIAAVHQL 681

Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAG 145
            +G+   R +++LR H RG G   G
Sbjct: 682 HRGL--RRRQKELRHHGRGRGRRGG 704



 Score = 29.6 bits (65), Expect = 1.6
 Identities = 20/48 (41%), Positives = 26/48 (54%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGAR 50
           A+VL QV   RE LPA + G+G  AG    V+P+A   L+      AR
Sbjct: 777 ALVLPQVGALREALPADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRAR 824


>gi|118918405 SAC3 domain containing 1 [Homo sapiens]
          Length = 358

 Score = 30.4 bits (67), Expect = 0.94
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 15/94 (15%)

Query: 3   AVVLHQVREPREGLPALAAGIGLPAGQAR----LVSPRALPGLQPCAVAGARDALEALPV 58
           AV  H     RE L   A     P GQ      +V+  AL GL+      ARD  +A  +
Sbjct: 245 AVQCHVGHARREALARFARAFSTPKGQTLPLGFMVNLLALDGLRE-----ARDLCQAHGL 299

Query: 59  PILGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRV 92
           P+ G      + R   +RGR +++GLP  S  +V
Sbjct: 300 PLDG------EERVVFLRGRYVEEGLPPASTCKV 327


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%)

Query: 18  ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69
           A AA  GL A  ARL  P       PG  P A A A DAL     A   P   + P  ++
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250

Query: 70  FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129
            R+ P R R     L     G            RG P L    LS     + +   R   
Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301

Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154
            R+     RG   L G+ S  LP P
Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326


>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
           sapiens]
          Length = 492

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 114 SGARRGIGKGV--PRGRLRRQLRQHPRGGGLLAGAPSALLPPPAF 156
           S  RRG   GV  PR +L  +     +G G   GAP +L PPP F
Sbjct: 310 SAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%)

Query: 18  ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69
           A AA  GL A  ARL  P       PG  P A A A DAL     A   P   + P  ++
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250

Query: 70  FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129
            R+ P R R     L     G            RG P L    LS     + +   R   
Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301

Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154
            R+     RG   L G+ S  LP P
Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326


>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
           sapiens]
          Length = 492

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 114 SGARRGIGKGV--PRGRLRRQLRQHPRGGGLLAGAPSALLPPPAF 156
           S  RRG   GV  PR +L  +     +G G   GAP +L PPP F
Sbjct: 310 SAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354


>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%)

Query: 18  ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69
           A AA  GL A  ARL  P       PG  P A A A DAL     A   P   + P  ++
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250

Query: 70  FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129
            R+ P R R     L     G            RG P L    LS     + +   R   
Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301

Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154
            R+     RG   L G+ S  LP P
Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326


>gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens]
          Length = 241

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 15  GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69
           G   +AAG  L   +      R  PG+QPC +      ++ +     P  + G +P  +Q
Sbjct: 45  GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104

Query: 70  FRRA-----PVRGRLLDDGLPLRSGG 90
            R       PVR + +D    L SGG
Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130


>gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens]
          Length = 286

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 15  GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69
           G   +AAG  L   +      R  PG+QPC +      ++ +     P  + G +P  +Q
Sbjct: 45  GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104

Query: 70  FRRA-----PVRGRLLDDGLPLRSGG 90
            R       PVR + +D    L SGG
Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130


>gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens]
          Length = 316

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 15  GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69
           G   +AAG  L   +      R  PG+QPC +      ++ +     P  + G +P  +Q
Sbjct: 45  GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104

Query: 70  FRRA-----PVRGRLLDDGLPLRSGG 90
            R       PVR + +D    L SGG
Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130


>gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]
          Length = 485

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 113 LSGARRGIGKGVPRGRLRRQLRQHPRGGG 141
           LSGA  G+ +G   GR RR+ R  P G G
Sbjct: 17  LSGADAGVDRGSESGRKRRKKRPKPGGAG 45


>gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]
          Length = 619

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 113 LSGARRGIGKGVPRGRLRRQLRQHPRGGG 141
           LSGA  G+ +G   GR RR+ R  P G G
Sbjct: 17  LSGADAGVDRGSESGRKRRKKRPKPGGAG 45


>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 334

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 13/71 (18%)

Query: 7   HQVREP-REGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRP 65
           H  REP R G P   A + +P     L+  R+ P  + CAV+G + AL            
Sbjct: 152 HLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAAL------------ 199

Query: 66  LGSQFRRAPVR 76
           LG+  R AP R
Sbjct: 200 LGAHVRPAPDR 210


>gi|123701326 zinc finger protein 831 [Homo sapiens]
          Length = 1677

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 12/79 (15%)

Query: 12 PREGLPALAAGI-GLPAGQAR---LVSPRALP---GLQPCAVAGARDALEALPVPILGVR 64
          P    PA   G  G P GQA     + P  LP   GL P  V      L+ALP+P+    
Sbjct: 12 PARDQPAPTPGPPGAPGGQASPHLTLGPVLLPPEQGLAPPTVF-----LKALPIPLYHTV 66

Query: 65 PLGSQFRRAPVRGRLLDDG 83
          P G    RAP+    LD G
Sbjct: 67 PPGGLQPRAPLVTGSLDGG 85


>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
          Length = 334

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 29  QARLVSPRALPG-LQPCAVAGARDALEALPVPILG 62
           Q RL+SP  LP  L PCA      AL    +P LG
Sbjct: 184 QGRLLSPPGLPALLPPCATGALGSALRGPSLPALG 218


>gi|239748707 PREDICTED: hypothetical protein XP_002346778 [Homo
           sapiens]
          Length = 92

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 94  LRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPP 153
           LR++ V RV+ + R L  +  G   G+G   P G+++  L    R G    G   +  PP
Sbjct: 25  LRLMAV-RVKAVRRELLYVCFGETPGLGISQPLGQVQEGLHAGRRRGQRRPGLQVSQTPP 83

Query: 154 PA 155
           P+
Sbjct: 84  PS 85


>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
           sapiens]
          Length = 909

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 53/196 (27%), Positives = 71/196 (36%), Gaps = 46/196 (23%)

Query: 15  GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRPLGS--QFRR 72
           G P+ +   G  A  +RL   RA  G+Q       R+ + A    ++G  P+    + R 
Sbjct: 632 GSPSPSLCDGRNASHSRLSKNRAQNGIQEAP----RERVPAALTAVVGQPPIPPPLELRS 687

Query: 73  APVRGRLLDD-----GLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRG-------- 119
             +R  L  +     G  LR GG VG++  G   VRG P        GA+          
Sbjct: 688 VELRALLGPEVPGAVGAALRGGGEVGIQEGG---VRGPPTSRPARAQGAQESPLPAPSEP 744

Query: 120 ----IGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSV 175
                GK  PR +        P  G  LAG P A    P              QP   S 
Sbjct: 745 PEAVEGKASPREQGEEGAPTQPCCG--LAGGPQA---GPT------------QQPAARSG 787

Query: 176 QPGGSV---RLGKLIP 188
            P G +    LGKL+P
Sbjct: 788 HPNGEIGQEGLGKLVP 803


>gi|239742733 PREDICTED: hypothetical protein XP_002342624 [Homo
           sapiens]
          Length = 92

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 94  LRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPP 153
           LR++ V RV+ + R L  +  G   G+G   P G+++  L    R G    G   +  PP
Sbjct: 25  LRLMAV-RVKAVRRELLYVCFGETPGLGISQPLGQVQEGLHAGRRRGQRRPGLQVSQTPP 83

Query: 154 PA 155
           P+
Sbjct: 84  PS 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.146    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,520,651
Number of Sequences: 37866
Number of extensions: 490752
Number of successful extensions: 1598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1550
Number of HSP's gapped (non-prelim): 77
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.