Search of human proteins with 239745245

Search of human proteins with 239745245

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745245 PREDICTED: hypothetical protein XP_002343396 [Homo
sapiens]
         (142 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745245 PREDICTED: hypothetical protein XP_002343396 [Homo ...   277   2e-75
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H...    39   0.001
gi|4826964 UV excision repair protein RAD23 homolog A [Homo sapi...    37   0.004
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos...    37   0.004
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          37   0.006
gi|110227615 echinoderm microtubule associated protein like 3 [H...    37   0.007
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]                36   0.009
gi|50843827 activating molecule in beclin-1-regulated autophagy ...    36   0.012
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ...    36   0.012
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]            35   0.021
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]            35   0.021
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]            35   0.021
gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]            35   0.027
gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo ...    35   0.027
gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo ...    35   0.027
gi|57529222 basic helix-loop-helix domain containing, class B, 4...    34   0.036
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    34   0.036
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    34   0.036
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    34   0.036
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]         34   0.047
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    34   0.047
gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]           34   0.047
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    34   0.047
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]            34   0.047
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa...    34   0.047
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             34   0.047
gi|148806908 fibronectin type III domain containing 1 [Homo sapi...    33   0.061
gi|7706687 Enah/Vasp-like [Homo sapiens]                               33   0.061
gi|148839382 ring finger protein 169 [Homo sapiens]                    33   0.061
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        33   0.061

>gi|239745245 PREDICTED: hypothetical protein XP_002343396 [Homo
           sapiens]
          Length = 142

 Score =  277 bits (708), Expect = 2e-75
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MKEGSQAGGRLRAYGVLSSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQ 60
           MKEGSQAGGRLRAYGVLSSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQ
Sbjct: 1   MKEGSQAGGRLRAYGVLSSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQ 60

Query: 61  PSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQP 120
           PSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQP
Sbjct: 61  PSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQP 120

Query: 121 QSRSDSPLPEVALAKSSAISVK 142
           QSRSDSPLPEVALAKSSAISVK
Sbjct: 121 QSRSDSPLPEVALAKSSAISVK 142


>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
           sapiens]
          Length = 1512

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 45  GIPCSLARSPTLATHQPSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARS 104
           G P + A SP       +    S PAA  G L  AGS G    D RR           R 
Sbjct: 13  GFPGARATSPEAGGGGGALKASSAPAAAAGLLREAGSGGRERADWRRR--------QLRK 64

Query: 105 ARRLQ----PEERLALQLQPQSRSDSPLPEVALAKSS 137
            R ++    PE+ L L   P + S SP PE A A  S
Sbjct: 65  VRSVELDQLPEQPLFLAASPPASSTSPSPEPADAAGS 101



 Score = 31.6 bits (70), Expect = 0.23
 Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 23/136 (16%)

Query: 3   EGSQAGGRLRAYGV-LSSAGLGTEGG---------KRSELTAARQTAGLGPPGIPCSLAR 52
           E    GG L+A     ++AGL  E G         +R +L   R       P  P  LA 
Sbjct: 23  EAGGGGGALKASSAPAAAAGLLREAGSGGRERADWRRRQLRKVRSVELDQLPEQPLFLAA 82

Query: 53  SPTLATHQPSQAPKSLPAAGQG----RLPP----AGSSGEREEDRRRSPGGGSLSDAARS 104
           SP  ++  PS  P     +G G     +PP    A   G    +   +P  G+ S AA  
Sbjct: 83  SPPASSTSPSPEPADAAGSGTGFQPVAVPPPHGAASRGGAHLTESVAAPDSGASSPAA-- 140

Query: 105 ARRLQPEERLALQLQP 120
               +P E+ A   +P
Sbjct: 141 ---AEPGEKRAPAAEP 153


>gi|4826964 UV excision repair protein RAD23 homolog A [Homo
           sapiens]
          Length = 363

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 18  SSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPS----QAPKSLPAAGQ 73
           + AG GT     +  TAA +++   PP     ++  P  A    S     AP + P +  
Sbjct: 79  TKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVS 138

Query: 74  GRLPPAGSSGEREED 88
           G +P +GSSG REED
Sbjct: 139 GSVPSSGSSG-REED 152


>gi|70980547 FYVE-finger-containing Rab5 effector protein
           rabenosyn-5 [Homo sapiens]
          Length = 784

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)

Query: 41  LGPPGIPCSLA-RSPTLATHQPSQAPKSLPAAGQGRLPPAGSSGERE--------EDRRR 91
           LG   +P S A ++P+L++ QP++     PA GQ RLP +    + E        E+   
Sbjct: 575 LGSSPVPSSTAPKTPSLSSTQPTRVWSGPPAVGQERLPQSSMPQQHEGPSLNPFDEEDLS 634

Query: 92  SP----------GGGSLSDAARSARRLQP-----EERLALQLQPQSRSDSPLP 129
           SP           G SL  +AR  +   P     EE  A+   P  + DSP P
Sbjct: 635 SPMEEATTGPPAAGVSLDPSARILKEYNPFEEEDEEEEAVAGNPFIQPDSPAP 687


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 15   GVLSSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKS-LPAAGQ 73
            GV+S  G     GK S    ++QT    PP  P     +  L T  P+ +  S L +A  
Sbjct: 1423 GVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATT 1482

Query: 74   GRLP-PAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDSPLPEVA 132
              LP  AG S E           G    +A +A  L+ ++   L   P   SDS   E  
Sbjct: 1483 PSLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPV 1542

Query: 133  LAK 135
            LA+
Sbjct: 1543 LAQ 1545


>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
           sapiens]
          Length = 896

 Score = 36.6 bits (83), Expect = 0.007
 Identities = 35/116 (30%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 18  SSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP 77
           S  G GT       L A     GL P   P  ++R     T    ++    P    G  P
Sbjct: 52  SLQGSGTPAPPGDSLAAP---PGLPPTCTPSLVSRGTQTETEVELKSSPGPPGLSNG--P 106

Query: 78  PAGSSGEREEDRRRSPGGGSLSDAARS------ARRLQPEERLALQLQPQSRSDSP 127
           PA      E    +S GGGS S  A S       R LQP +R     +  S S SP
Sbjct: 107 PAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQRADTPRRNSSSSSSP 162


>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
          Length = 778

 Score = 36.2 bits (82), Expect = 0.009
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 23  GTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLPPAGSS 82
           G   G++    +AR T   GPPG P S   +P    H P   P++ P    G  PP    
Sbjct: 485 GGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPL---HSPLHTPRASPTGTPGTTPPP--- 538

Query: 83  GEREEDRRRSPGGGSLSDAARS 104
                    SPGGG    A RS
Sbjct: 539 ---------SPGGGVGGAAWRS 551


>gi|50843827 activating molecule in beclin-1-regulated autophagy [Homo
            sapiens]
          Length = 1208

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 18   SSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP 77
            +S GL  E G+ +E   + +TA    PG P      PTL +  P   P SLP+A    L 
Sbjct: 1120 TSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTL- 1178

Query: 78   PAGSSGEREEDRRRSPGGGSLSDAA 102
                  E   +     GG S  DAA
Sbjct: 1179 ----HCELTNNNHLLDGGSSRGDAA 1199


>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
           sapiens]
          Length = 306

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 19  SAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPS----QAPKSLPAAGQG 74
           + G G   G RS  +A +Q  G        + A +PT + H+      Q P+  PAAG G
Sbjct: 97  AGGTGQRRGSRSSSSADQQ--GAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTG 154

Query: 75  RLPPAGSSGEREEDRR--RSPGGGSLSDAARSARRLQPEERLALQLQP 120
           +   +G S   ++ R   R     +      S  R +  +RL LQ QP
Sbjct: 155 QRRGSGCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQP 202



 Score = 29.6 bits (65), Expect = 0.88
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 60  QPSQAPKSLPAAGQGRLPPAGSS--------GEREEDRRRSPGGGSLSDAARSARRLQPE 111
           +P Q P+  PA G G+   +GSS         +REE+   +P   S        +  QP+
Sbjct: 34  RPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQ 93

Query: 112 ERLA 115
            R A
Sbjct: 94  RRPA 97


>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 35.0 bits (79), Expect = 0.021
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 48  CSLARSPTLATHQPSQAPKSL----PAAGQGRLPP---AGSSGEREEDRRRSPGGGSLSD 100
           C +A SP +    P   P+ L    PAAG   LPP   +  SG     R R         
Sbjct: 92  CQVAASPLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGV 151

Query: 101 AARSARRLQPEERLALQLQPQSRSDSPLPEVAL 133
           AAR  R L     LA +  P++ + +PL +  L
Sbjct: 152 AARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 35.0 bits (79), Expect = 0.021
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 48  CSLARSPTLATHQPSQAPKSL----PAAGQGRLPP---AGSSGEREEDRRRSPGGGSLSD 100
           C +A SP +    P   P+ L    PAAG   LPP   +  SG     R R         
Sbjct: 92  CQVAASPLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGV 151

Query: 101 AARSARRLQPEERLALQLQPQSRSDSPLPEVAL 133
           AAR  R L     LA +  P++ + +PL +  L
Sbjct: 152 AARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 35.0 bits (79), Expect = 0.021
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 48  CSLARSPTLATHQPSQAPKSL----PAAGQGRLPP---AGSSGEREEDRRRSPGGGSLSD 100
           C +A SP +    P   P+ L    PAAG   LPP   +  SG     R R         
Sbjct: 92  CQVAASPLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGV 151

Query: 101 AARSARRLQPEERLALQLQPQSRSDSPLPEVAL 133
           AAR  R L     LA +  P++ + +PL +  L
Sbjct: 152 AARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


>gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 102

 Score = 34.7 bits (78), Expect = 0.027
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 13/74 (17%)

Query: 30 SELTAARQ------TAGLGPPGIPCSLARSPTLATHQPSQ-------APKSLPAAGQGRL 76
          S LTAA +         LG   +P S+  SP L   QP +       AP   PA G G L
Sbjct: 2  SPLTAAERGPRTPRPPALGTRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGGL 61

Query: 77 PPAGSSGEREEDRR 90
           P  +SG R   +R
Sbjct: 62 APRATSGSRAARQR 75


>gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo
          sapiens]
          Length = 102

 Score = 34.7 bits (78), Expect = 0.027
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 13/74 (17%)

Query: 30 SELTAARQ------TAGLGPPGIPCSLARSPTLATHQPSQ-------APKSLPAAGQGRL 76
          S LTAA +         LG   +P S+  SP L   QP +       AP   PA G G L
Sbjct: 2  SPLTAAERGPRTPRPPALGTRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGGL 61

Query: 77 PPAGSSGEREEDRR 90
           P  +SG R   +R
Sbjct: 62 APRATSGSRAARQR 75


>gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo
          sapiens]
          Length = 102

 Score = 34.7 bits (78), Expect = 0.027
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 13/74 (17%)

Query: 30 SELTAARQ------TAGLGPPGIPCSLARSPTLATHQPSQ-------APKSLPAAGQGRL 76
          S LTAA +         LG   +P S+  SP L   QP +       AP   PA G G L
Sbjct: 2  SPLTAAERGPRTPRPPALGTRRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAPALGNGGL 61

Query: 77 PPAGSSGEREEDRR 90
           P  +SG R   +R
Sbjct: 62 APRATSGSRAARQR 75


>gi|57529222 basic helix-loop-helix domain containing, class B, 4
           [Homo sapiens]
          Length = 225

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)

Query: 18  SSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP 77
           ++A  G   G   E  AAR   G G PG    L  +P  A   P+QA +S   +G+    
Sbjct: 20  AAAAAGLAYGAAREPEAAR---GYGTPGPGGDLPAAP--APRAPAQAAES---SGE---- 67

Query: 78  PAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSR 123
            +G   +  E RRR  G GS +D  R     +P E+ +L+L   +R
Sbjct: 68  QSGDEDDAFEQRRRRRGPGSAADGRR-----RPREQRSLRLSINAR 108


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 44  PGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP-PAGSSGEREEDRRRSPGGGSLSDA- 101
           P +P   A +P      PS  P + PA+ +  +P PA S  ER       PGG   +   
Sbjct: 578 PEVPTVPAEAPA-----PSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA 632

Query: 102 ---ARSARRLQPEERLALQLQPQSRSDSPLPEVALAKSSAISVK 142
              AR AR       L+L   P+ R   P       K S I  K
Sbjct: 633 RREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGK 676



 Score = 27.3 bits (59), Expect = 4.4
 Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 1/101 (0%)

Query: 28  KRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP-PAGSSGERE 86
           KR+    +  T   G P       R P L     + A  S P A     P P G+ G R 
Sbjct: 703 KRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRR 762

Query: 87  EDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDSP 127
              +R+     L+   R   R      +AL  Q      +P
Sbjct: 763 SPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAP 803


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 44  PGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP-PAGSSGEREEDRRRSPGGGSLSDA- 101
           P +P   A +P      PS  P + PA+ +  +P PA S  ER       PGG   +   
Sbjct: 573 PEVPTVPAEAPA-----PSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA 627

Query: 102 ---ARSARRLQPEERLALQLQPQSRSDSPLPEVALAKSSAISVK 142
              AR AR       L+L   P+ R   P       K S I  K
Sbjct: 628 RREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGK 671



 Score = 27.3 bits (59), Expect = 4.4
 Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 1/101 (0%)

Query: 28  KRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLP-PAGSSGERE 86
           KR+    +  T   G P       R P L     + A  S P A     P P G+ G R 
Sbjct: 698 KRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRR 757

Query: 87  EDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDSP 127
              +R+     L+   R   R      +AL  Q      +P
Sbjct: 758 SPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAP 798


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 13/112 (11%)

Query: 19  SAGLGTEGGKRSELTAARQTAGLGPPGIPC-SLARSPTLATHQPSQAPKSLPAAGQGRLP 77
           SA   +E   +S+   +  +     P  PC S     TL    PS  P+   A+ +GR+ 
Sbjct: 452 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPS--PRGTTASPKGRV- 508

Query: 78  PAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDSPLP 129
                  R+E+ + SP      D ++S RR   E+  A    P S + SP P
Sbjct: 509 ------RRKEEAKESPSAAGPEDKSQSKRRASNEKESA---APASPAPSPAP 551



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 18  SSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLP------AA 71
           S +  G E   +S+  A+ +     P     S A SPT A  Q  Q P   P       +
Sbjct: 517 SPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTS 576

Query: 72  GQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDSPLPEV 131
                PP   S        R      L++  R AR  +  ER   + + Q+  D  + E 
Sbjct: 577 PPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAR--EQREREEQERRLQAERDKRMREE 634

Query: 132 ALAKSS 137
            LA+ +
Sbjct: 635 QLAREA 640


>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
          Length = 365

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 11/78 (14%)

Query: 28  KRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQ-----------APKSLPAAGQGRL 76
           +R   +A+  +A L PPG P +  R   +    P             A    P AG GR 
Sbjct: 274 RRPPQSASSLSASLRPPGAPATFLRPSPIPCSSPGPWQSLCGLGPPCAGCPWPTAGPGRR 333

Query: 77  PPAGSSGEREEDRRRSPG 94
            P G+S ER     R+ G
Sbjct: 334 SPGGTSPERSPGTARARG 351


>gi|239752994 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 55  TLATHQPSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERL 114
           +L T+      K+ P A +G    AGS G    D    PGG   +D  +  RR +P E+ 
Sbjct: 8   SLRTNWQESWKKARPEAAEGAAGQAGSPG----DSAVPPGGSRATDQDKRCRRNKPREKC 63

Query: 115 ALQLQPQS 122
           +  L P S
Sbjct: 64  SRGLPPLS 71


>gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]
          Length = 1180

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 26   GGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLPPAGSSGER 85
            G   S  T  +    +G PG      R P+L +H     P+S P AG+ R P +  + E 
Sbjct: 1046 GESDSAETNFQDRTPIGGPG-----PRGPSLRSH-----PRSGPCAGKPRAPRSRGAAEP 1095

Query: 86   EEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQ 121
               R  +PG G+   A ++A     + R A   +P+
Sbjct: 1096 PSRRVAAPGVGTAGGANKAAATRAAQARDARSERPR 1131


>gi|239747548 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 55  TLATHQPSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERL 114
           +L T+      K+ P A +G    AGS G    D    PGG   +D  +  RR +P E+ 
Sbjct: 8   SLRTNWQESWKKARPEAAEGAAGQAGSPG----DSAVPPGGSRATDQDKRCRRNKPREKC 63

Query: 115 ALQLQPQS 122
           +  L P S
Sbjct: 64  SRGLPPLS 71


>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 23  GTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQ-PSQAPKSLPAAGQGRLPPAGS 81
           G  GG +     + +  G   P  P    R P  A    P +A   +PAAG    PPA +
Sbjct: 11  GGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAA 70

Query: 82  SGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQP 120
              R   R  +P  G     A +   +QP  R  L  +P
Sbjct: 71  HPARPALRGETPAPGR-RGRATTRGEVQPSVRPPLSHRP 108


>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
           sapiens]
          Length = 313

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 55  TLATHQPSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERL 114
           +L T+      K+ P A +G    AGS G    D    PGG   +D  +  RR +P E+ 
Sbjct: 8   SLRTNWQESWKKARPEAAEGAAGQAGSPG----DSAVPPGGSRATDQDKRCRRNKPREKC 63

Query: 115 ALQLQPQS 122
           +  L P S
Sbjct: 64  SRGLPPLS 71


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 2   KEGSQAGGRLRAYGVLSSAGLGTE-----GGKRSELTAARQTAGLGPPGIPCS------- 49
           K GSQ     R+      +G G+       G+RS     R  +   PP  P S       
Sbjct: 288 KTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRD 347

Query: 50  --LARSPTL-ATHQPSQAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGGSLSDAARSAR 106
              A +PT  A  + S +P+S P++       AG +G R   RRR     S + A R   
Sbjct: 348 KAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRG 407

Query: 107 RLQP 110
           R +P
Sbjct: 408 RRRP 411


>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
          Length = 1894

 Score = 33.5 bits (75), Expect = 0.061
 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 23/132 (17%)

Query: 16   VLSSAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAPKSLPAAGQGR 75
            V S  G G  G  RS+   A   A    PG P S AR P+ A    S+ P   P + + +
Sbjct: 1113 VESPTGAGAGGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPGKSEPPSKRPLSSKSQ 1172

Query: 76   LPPAGSSGEREE-------------------DRRRSPGGGSLSDAARSARRLQPEERLAL 116
               +    E E+                       +P GG  +D + +    +P    A+
Sbjct: 1173 QSVSAEDDEEEDAGFFKGGKEDLLSSSVPKWPSSSTPRGGKDADGSLAKEEREP----AI 1228

Query: 117  QLQPQSRSDSPL 128
             L P+  S +P+
Sbjct: 1229 ALAPRGGSLAPV 1240


>gi|7706687 Enah/Vasp-like [Homo sapiens]
          Length = 418

 Score = 33.5 bits (75), Expect = 0.061
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 12/101 (11%)

Query: 36  RQTAGLGP---PGIPCSLARSPTLATHQPSQAPKSLPAAGQGRLPP-------AGSSGER 85
           R+T+  GP   PG P S A +P   +  P   P  +P    G  PP        G+ G  
Sbjct: 157 RRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSS 216

Query: 86  EEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSDS 126
            ++   S  G + + A    RR+Q  E  +    P   S S
Sbjct: 217 HDE--SSMSGLAAAIAGAKLRRVQRPEDASGGSSPSGTSKS 255


>gi|148839382 ring finger protein 169 [Homo sapiens]
          Length = 708

 Score = 33.5 bits (75), Expect = 0.061
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 7  AGGRLRAYGVLSSAGLGTEGGK-RSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQAP 65
          AG   RA    ++A L   G + R + TAA +T   GP   P  L  SP L   QP   P
Sbjct: 4  AGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLL--QPPLPP 61

Query: 66 KSLPAAGQGRLPPAGSS 82
          +   +   G L P G +
Sbjct: 62 RPEESGCAGCLEPPGEA 78


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 33.5 bits (75), Expect = 0.061
 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 17/126 (13%)

Query: 18   SSAGLGTEGGKRSELTAARQTAGLGPP--GIPCSLARSPTLATHQP---SQAPKSLP--- 69
            S +G   E   +S L+  R  +G  P     P +  R+ + +   P   + AP++LP   
Sbjct: 1577 SRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRS 1636

Query: 70   ---AAGQGRLP-PAGSSGEREEDRRRSPGGGSLSDAARSARRLQPEERLALQLQPQSRSD 125
               ++ +GR P P GSS         SP     S  AR   R  PE +   +  P+ RS 
Sbjct: 1637 RSGSSSKGRGPSPEGSSSTES-----SPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSS 1691

Query: 126  SPLPEV 131
               PE+
Sbjct: 1692 RSSPEL 1697



 Score = 30.4 bits (67), Expect = 0.52
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 12/97 (12%)

Query: 44   PGIPCSLARSPTLAT--HQPS-----QAPKSLPAAGQGRLPPAGSSGEREEDRRRSPGGG 96
            PG+P S    P  +T   QPS     Q  K   ++       + SS         S  G 
Sbjct: 2499 PGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGS 2558

Query: 97   SLSDAARSARRLQPEERLALQLQPQSRSDSPLPEVAL 133
            S SD+  S+  +QPE  +AL+  P   S +P P+ A+
Sbjct: 2559 SSSDSEGSSLPVQPE--VALKRVP---SPTPAPKEAV 2590



 Score = 26.2 bits (56), Expect = 9.7
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 13/110 (11%)

Query: 19   SAGLGTEGGKRSELTAARQTAGLGPPGIPCSLARSPTLATHQPSQA---PKSLPAAGQGR 75
            S+   +     S  +++  ++         S + S + ++  PS A   P++LP     +
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 2666

Query: 76   LPPAGSSGEREEDRRRSPGGGSLSDAARSARRL--QPEERLALQLQPQSR 123
             PP G      E R RSP      D+ R +R L   P ER     QP  R
Sbjct: 2667 KPPPG------ERRSRSP--RKPIDSLRDSRSLSYSPVERRRPSPQPSPR 2708


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.307    0.126    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,412,775
Number of Sequences: 37866
Number of extensions: 364141
Number of successful extensions: 2685
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 2388
Number of HSP's gapped (non-prelim): 733
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.