DEPDC1B 14667

Name: DEPDC1B	Sequence: fasta or formatted (467aa)		NCBI GI: 223633997
Description: DEP domain containing 1B isoform 2		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [529aa] DEP domain containing 1B isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 22 2 C cysteine 2.6 12 2 D aspartate 4.1 19 2 E glutamate 7.7 36 2 F phenylalanine 5.1 24 1 G glycine 3.0 14 1 H histidine 2.8 13 1 I isoleucine 3.9 18 2 K lysine 8.4 39 2 L leucine 12.4 58 3 M methionine 3.2 15 2 N asparagine 3.4 16 1 P proline 7.5 35 2 Q glutamine 4.5 21 1 R arginine 6.4 30 2 S serine 4.9 23 2 T threonine 3.6 17 1 V valine 7.1 33 2 W tryptophan 1.9 9 1 Y tyrosine 2.8 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEP domain containing 1B isoform 2 DEPDC1B 0.963 DEP domain containing 1B isoform 1 DEPDC1 0.464 DEP domain containing 1 isoform b DEPDC1 0.311 DEP domain containing 1 isoform a DEPDC7 0.063 novel 58.3 KDA protein isoform 2 DEPDC7 0.063 novel 58.3 KDA protein isoform 1 DEPDC4 0.039 DEP domain containing 4 SH3BP1 0.022 SH3-domain binding protein 1 STARD8 0.018 StAR-related lipid transfer (START) domain containi... STARD8 0.018 StAR-related lipid transfer (START) domain containi... STARD8 0.018 StAR-related lipid transfer (START) domain containin... ARHGAP19 0.018 Rho GTPase activating protein 19 DLC1 0.017 deleted in liver cancer 1 isoform 1 DLC1 0.017 deleted in liver cancer 1 isoform 2 FLJ30058 0.016 hypothetical protein LOC158763 ARHGAP30 0.016 Rho GTPase activating protein 30 isoform 2 ARHGAP30 0.016 Rho GTPase activating protein 30 isoform 1 ARHGAP17 0.015 nadrin isoform 1 ARHGAP17 0.015 nadrin isoform 2 DEPDC6 0.015 DEP domain containing 6 ARHGAP18 0.015 Rho GTPase activating protein 18 ARHGAP6 0.015 Rho GTPase activating protein 6 isoform 4 ARHGAP6 0.015 Rho GTPase activating protein 6 isoform 3 ARHGAP6 0.015 Rho GTPase activating protein 6 isoform 1 STARD13 0.014 StAR-related lipid transfer (START) domain containin... STARD13 0.014 StAR-related lipid transfer (START) domain containin... STARD13 0.014 StAR-related lipid transfer (START) domain containin... CDGAP 0.013 Cdc42 GTPase-activating protein RICH2 0.013 Rho GTPase-activating protein RICH2 SNX26 0.012 sorting nexin 26 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.