Search of human proteins with 239735596

Search of human proteins with 239735596

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239735596 transmembrane protein 171 isoform 1 [Homo sapiens]
         (324 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239735596 transmembrane protein 171 isoform 1 [Homo sapiens]       660   0.0  
gi|239735594 transmembrane protein 171 isoform 2 [Homo sapiens]       654   0.0  
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    35   0.069
gi|15529996 son of sevenless homolog 1 [Homo sapiens]                  35   0.12 
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor...    34   0.20 
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor...    34   0.20 
gi|167466201 WAS protein family homolog 1 [Homo sapiens]               34   0.20 
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    34   0.20 
gi|61743942 abl-interactor 1 isoform a [Homo sapiens]                  34   0.20 
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    33   0.26 
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi...    33   0.34 
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]      33   0.34 
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]       33   0.34 
gi|56606125 hypothetical protein LOC201725 [Homo sapiens]              33   0.34 
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          33   0.45 
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    33   0.45 
gi|209969757 early growth response 2 protein isoform b [Homo sap...    32   0.59 
gi|209969755 early growth response 2 protein isoform a [Homo sap...    32   0.59 
gi|209969753 early growth response 2 protein isoform a [Homo sap...    32   0.59 
gi|9845524 early growth response 2 protein isoform a [Homo sapiens]    32   0.59 
gi|239757277 PREDICTED: hypothetical protein [Homo sapiens]            32   0.59 
gi|239751780 PREDICTED: hypothetical protein [Homo sapiens]            32   0.59 
gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo ...    32   0.59 
gi|8922328 RNA binding motif protein 22 [Homo sapiens]                 32   0.59 
gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo sap...    32   0.59 
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           32   0.59 
gi|134244285 Notch homolog 3 [Homo sapiens]                            32   0.77 

>gi|239735596 transmembrane protein 171 isoform 1 [Homo sapiens]
          Length = 324

 Score =  660 bits (1704), Expect = 0.0
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60
           MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK
Sbjct: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60

Query: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120
           VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL
Sbjct: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120

Query: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180
           TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV
Sbjct: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180

Query: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240
           AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP
Sbjct: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240

Query: 241 GTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 300
           GTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL
Sbjct: 241 GTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 300

Query: 301 PPRYEEKENAAATFLPLSSEPSPP 324
           PPRYEEKENAAATFLPLSSEPSPP
Sbjct: 301 PPRYEEKENAAATFLPLSSEPSPP 324


>gi|239735594 transmembrane protein 171 isoform 2 [Homo sapiens]
          Length = 323

 Score =  654 bits (1687), Expect = 0.0
 Identities = 323/324 (99%), Positives = 323/324 (99%), Gaps = 1/324 (0%)

Query: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60
           MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK
Sbjct: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60

Query: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120
           VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL
Sbjct: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120

Query: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180
           TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV
Sbjct: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180

Query: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240
           AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP
Sbjct: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240

Query: 241 GTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 300
           GTNSLLPNENPPSYYSIFNYG TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL
Sbjct: 241 GTNSLLPNENPPSYYSIFNYG-TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 299

Query: 301 PPRYEEKENAAATFLPLSSEPSPP 324
           PPRYEEKENAAATFLPLSSEPSPP
Sbjct: 300 PPRYEEKENAAATFLPLSSEPSPP 323


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 35.4 bits (80), Expect = 0.069
 Identities = 42/140 (30%), Positives = 54/140 (38%), Gaps = 24/140 (17%)

Query: 185  KRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNS 244
            K NT    + A ER    I      +  V +S    PPP PP  P S+AS+  E P    
Sbjct: 2256 KTNTSTGLKMAMERSLNPINFNP--ENNVKESECPLPPPSPPPPPPSNASSEIEFP---- 2309

Query: 245  LLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRY 304
             LP   PP    +F     P   G       E I         +E    P LP   PP  
Sbjct: 2310 -LP---PPPPLMMF-----PEKNGFLPSLSTEKI--------KAEFESFPGLPLPPPPVD 2352

Query: 305  EEKE-NAAATFLPLSSEPSP 323
            E+ E  +++ FLP    P+P
Sbjct: 2353 EKSERESSSMFLPPPPPPTP 2372


>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
          Length = 1333

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 15/115 (13%)

Query: 209  VQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEG 268
            + +T G   +  PPP PP     SA A   SP        ++PP+        R PTS+ 
Sbjct: 1138 ISLTKGTDEVPVPPPVPPRRRPESAPA-ESSPSKIMSKHLDSPPAIPP-----RQPTSK- 1190

Query: 269  AASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSP 323
            A S R     Y+IS   S S+   +P L   LPPR   +     +  PL  +P P
Sbjct: 1191 AYSPR-----YSISDRTSISDPPESPPL---LPPREPVRTPDVFSSSPLHLQPPP 1237


>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
           [Homo sapiens]
          Length = 465

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 287 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 327


>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
           [Homo sapiens]
          Length = 482

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 304 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 344


>gi|167466201 WAS protein family homolog 1 [Homo sapiens]
          Length = 465

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 287 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 327


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 222 PPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTI 281
           PPPPP  P S        PG   +    +PP + S        +    A     ES  +I
Sbjct: 458 PPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSS--------SPPPIAPLARAESTSSI 509

Query: 282 SGTNSSSEASHTPHLPSELPPR-YEEKENAAATFLPLSSEPSP 323
           S TNS S A+ TP + +E P   + ++     TF   S  PSP
Sbjct: 510 SSTNSLSAAT-TPTVENEQPSLVWFDRGKFYLTFEGSSRGPSP 551


>gi|61743942 abl-interactor 1 isoform a [Homo sapiens]
          Length = 508

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 22/156 (14%)

Query: 190 NAGQDASEREEGQIQIMEPVQV------TVGDSVIIFPPPP-----PPYFPESSASAVAE 238
           ++G   S    G   I  P+ V      T+G   I  PPP      PP  P    S V  
Sbjct: 242 SSGGSGSRENSGSSSIGIPIAVPTPSPPTIGPENISVPPPSGAPPAPPLAPLLPVSTVIA 301

Query: 239 SPG----------TNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSS 288
           +PG          T  +  + +  S  S   Y RTP+     S +   +   +   NS S
Sbjct: 302 APGSAPGSQYGTMTRQISRHNSTTSSTSSGGYRRTPSVTAQFSAQPHVNGGPLYSQNSIS 361

Query: 289 EASHTPHLPSELPPRYEEKENAAATFLPLSSEPSPP 324
            A   P +P +L P+       A     ++  P+PP
Sbjct: 362 IAPPPPPMP-QLTPQIPLTGFVARVQENIADSPTPP 396


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 204 QIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRT 263
           Q +E       +SV   PP   P F  +  +A   SP T+ L P+ NP          +T
Sbjct: 284 QALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNP--LLESLKKMQT 341

Query: 264 PTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPP 302
           P S     E         S   +++EA   P  PS LPP
Sbjct: 342 PPSLPPCPE---------SAGAATTEALSPPKTPSLLPP 371


>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
           sapiens]
          Length = 862

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 20/92 (21%)

Query: 221 PPPPPPYFPES---SASAVAESPG--TNSLLPNENPPSYYSIFNYGRTPTSEGAASERDC 275
           PPPP P  P S   S SA +ES G  T SL P               T TSEGA S    
Sbjct: 218 PPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNT-----------NTNTSEGATS---- 262

Query: 276 ESIYTISGTNSSSEASHTPHLPSELPPRYEEK 307
             I  ++ +  S      P   + LPP +E++
Sbjct: 263 GLIIPLTISGGSGPRPLNPVTQAPLPPGWEQR 294


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
          Length = 733

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 18/109 (16%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYT 280
           PPPPP   P S   A   +                 ++  G  P +   ASER C  +  
Sbjct: 195 PPPPPAAEPPSGPEAAVNT-------------HCAELYASGPGPAAALCASERRCSPLCG 241

Query: 281 ISGTNSSSEASHTPHLP---SELPPRYEEKENA--AATFLPLSSEPSPP 324
           +  +  S   S  P  P    ELPPR +   +A  AA   P  + PS P
Sbjct: 242 LDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSLP 290


>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
          Length = 714

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 18/109 (16%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYT 280
           PPPPP   P S   A   +                 ++  G  P +   ASER C  +  
Sbjct: 176 PPPPPAAEPPSGPEAAVNT-------------HCAELYASGPGPAAALCASERRCSPLCG 222

Query: 281 ISGTNSSSEASHTPHLP---SELPPRYEEKENA--AATFLPLSSEPSPP 324
           +  +  S   S  P  P    ELPPR +   +A  AA   P  + PS P
Sbjct: 223 LDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSLP 271


>gi|56606125 hypothetical protein LOC201725 [Homo sapiens]
          Length = 113

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 13/21 (61%), Positives = 15/21 (71%)

Query: 221 PPPPPPYFPESSASAVAESPG 241
           PPPPPP  P SS ++ A SPG
Sbjct: 12  PPPPPPSSPSSSDASAASSPG 32


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 207 EPVQVTVG-DSVIIFPPPPPPYF---PESSASAVAESPGTNSLLPNENPPSYYSIFNYGR 262
           EP   + G DS    P P P  F   P S AS +A +P  + + P+    + +S  + G 
Sbjct: 498 EPPSYSSGSDSSKAAPGPGPSTFSFVPPSKAS-LAPTPAASPVAPSA---ASFSFGSSGF 553

Query: 263 TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPS 322
            PT E          + ++S  N + + S  P   S +     EK  AAAT  P+SS  S
Sbjct: 554 KPTLESTP-------VPSVSAPNIAMKPSFPPST-SAVKVNLSEKFTAAATSTPVSSSQS 605

Query: 323 PP 324
            P
Sbjct: 606 AP 607


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 221 PPPPPPYFPESS-ASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEG 268
           P PP P+ P SS +SAVA S  T+S LP   P  +   F     P S+G
Sbjct: 872 PLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQF-----PPSQG 915


>gi|209969757 early growth response 2 protein isoform b [Homo
           sapiens]
          Length = 426

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 118 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 160


>gi|209969755 early growth response 2 protein isoform a [Homo
           sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|209969753 early growth response 2 protein isoform a [Homo
           sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|9845524 early growth response 2 protein isoform a [Homo sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|239757277 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


>gi|239751780 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


>gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo
           sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


>gi|8922328 RNA binding motif protein 22 [Homo sapiens]
          Length = 420

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 13/97 (13%)

Query: 228 FPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSS 287
           F    A+ VA     N L+ N    +      +GR+  + G   E+D         T+S 
Sbjct: 274 FATRQAAEVAAEKSFNKLIVNGRRLNV----KWGRSQAARGKEKEKD-------GTTDSG 322

Query: 288 SEASHTPHLPSELPPRYEEKENAAATF--LPLSSEPS 322
            +    P LP  LPP    +E A+A +  LP S  P+
Sbjct: 323 IKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPA 359


>gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo
           sapiens]
          Length = 202

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 18/93 (19%)

Query: 169 LIVLVGLCFFVVAHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYF 228
           LIVL GL  F     ++      GQ    +E G I  + P+      + +  PPPPPP  
Sbjct: 120 LIVLAGLGAFWYLRWRQHR----GQQPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGL 175

Query: 229 P----ESSASAVAESPGTNSLLPNENPPSYYSI 257
           P      +AS V ++P          PP Y S+
Sbjct: 176 PTYEQALAASGVHDAP----------PPPYTSL 198


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 204 QIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRT 263
           Q +E       +SV   PP   P F  +  +A   SP T+ L P+ NP          +T
Sbjct: 284 QALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNP--LLESLKKMQT 341

Query: 264 PTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPP 302
           P S     E         S   +++EA   P  PS LPP
Sbjct: 342 PPSLPPCPE---------SAGAATTEALSPPKTPSLLPP 371


>gi|134244285 Notch homolog 3 [Homo sapiens]
          Length = 2321

 Score = 32.0 bits (71), Expect = 0.77
 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 30/125 (24%)

Query: 205  IMEPVQVTVGDSVIIFPPPPPPYF--PESSASAVAESPGTNSLLPNENPPSYYSIFNYGR 262
            ++ PV V +  + +  P PP P F  P +    +  +PGT  + P E PP Y ++  +G 
Sbjct: 2162 LLNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQLL-NPGT-PVSPQERPPPYLAVPGHGE 2219

Query: 263  TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELP---PRYEEKENAAATFLPLSS 319
                            Y  +G +SS   +    +PSE P   P  E  E+ A+       
Sbjct: 2220 E---------------YPAAGAHSSPPKARFLRVPSEHPYLTPSPESPEHWAS------- 2257

Query: 320  EPSPP 324
             PSPP
Sbjct: 2258 -PSPP 2261


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,883,697
Number of Sequences: 37866
Number of extensions: 730526
Number of successful extensions: 6295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 5804
Number of HSP's gapped (non-prelim): 470
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.